RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 SPC24Q8NBT2 197 aa17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 RXFP2Q8WXD0 754 aa17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 PGAP3Q96FM1 320 aaPredicted RBP17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 FCRL2Q96LA5 508 aaPredicted RBP17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 EPHX3Q9H6B9 360 aa17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 ECT2Q9H8V3 914 aa17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 ARHGEF3Q9NR81 526 aa17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 HEBP1Q9NRV9 189 aa17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 PARVAQ9NVD7 372 aa17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 DDIT4Q9NX09 232 aa17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 CNOT8Q9UFF9 292 aaKnown RBP17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 AGO1Q9UL18 857 aaKnown RBP17.81■□□□□ 0.44
RABGGTA-203ENST00000543002 COL4A2P08572 1712 aa17.8■□□□□ 0.44
RABGGTA-203ENST00000543002 OTOL1A6NHN0 477 aaPredicted RBP17.8■□□□□ 0.44
RABGGTA-203ENST00000543002 C2CD4BA6NLJ0 364 aa17.8■□□□□ 0.44
RABGGTA-203ENST00000543002 LATS1O95835 1130 aa17.8■□□□□ 0.44
RABGGTA-203ENST00000543002 GLULP15104 373 aa17.8■□□□□ 0.44
RABGGTA-203ENST00000543002 TFE3P19532 575 aaPredicted RBP17.8■□□□□ 0.44
RABGGTA-203ENST00000543002 FECHP22830 423 aa17.8■□□□□ 0.44
RABGGTA-203ENST00000543002 RFC1P35251 1148 aaPredicted RBP17.8■□□□□ 0.44
RABGGTA-203ENST00000543002 SULT1E1P49888 294 aa17.8■□□□□ 0.44
RABGGTA-203ENST00000543002 PRKCQQ04759 706 aa17.8■□□□□ 0.44
RABGGTA-203ENST00000543002 NR1H3Q13133 447 aa17.8■□□□□ 0.44
RABGGTA-203ENST00000543002 MAMLD1Q13495 774 aa17.8■□□□□ 0.44
RABGGTA-203ENST00000543002 MLF2Q15773 248 aaPredicted RBP17.8■□□□□ 0.44
RABGGTA-203ENST00000543002 OTUD1Q5VV17 481 aaPredicted RBP17.8■□□□□ 0.44
RABGGTA-203ENST00000543002 AZIN2Q96A70 460 aa17.8■□□□□ 0.44
RABGGTA-203ENST00000543002 ZNF653Q96CK0 615 aa17.8■□□□□ 0.44
RABGGTA-203ENST00000543002 CFAP57Q96MR6 1250 aa17.8■□□□□ 0.44
RABGGTA-203ENST00000543002 TBCBQ99426 244 aa17.8■□□□□ 0.44
RABGGTA-203ENST00000543002 ADAM33Q9BZ11 813 aa17.8■□□□□ 0.44
RABGGTA-203ENST00000543002 C8orf33Q9H7E9 229 aaPredicted RBP17.8■□□□□ 0.44
RABGGTA-203ENST00000543002 TMEM51Q9NW97 253 aa17.8■□□□□ 0.44
RABGGTA-203ENST00000543002 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.8■□□□□ 0.44
RABGGTA-203ENST00000543002 CA14Q9ULX7 337 aa17.8■□□□□ 0.44
RABGGTA-203ENST00000543002 TICRRQ7Z2Z1 1910 aa17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 KRBA1A5PL33 1030 aa17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 ANKRD62A6NC57 917 aa17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 GOLGA6L6A8MZA4 724 aa17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 ATMINO43313 823 aaPredicted RBP17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 F9P00740 461 aa17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 CYP17A1P05093 508 aa17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 PDGFRAP16234 1089 aa17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 ABCB4P21439 1286 aa17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 SDC4P31431 198 aa17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 PTPN9P43378 593 aa17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 NME3Q13232 169 aa17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 DHCR24Q15392 516 aa17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 ZC3H12AQ5D1E8 599 aaKnown RBP17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 DCUN1D2Q6PH85 259 aa17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 RHBDF2Q6PJF5 856 aa17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 BNIPLQ7Z465 357 aa17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 SIX5Q8N196 739 aa17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 TTC8Q8TAM2 541 aa17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 MSANTD3Q96H12 275 aa17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 MCEEQ96PE7 176 aa17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 CALCOCO1Q9P1Z2 691 aa17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 STOML2Q9UJZ1 356 aa17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 SCINQ9Y6U3 715 aa17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 PIAS3Q9Y6X2 628 aa17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 TRIOO75962 3097 aa17.79■□□□□ 0.44
RABGGTA-203ENST00000543002 SYNJ2BP-COX16A0A087WUM0 186 aa17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 ENDOD1O94919 500 aa17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 APOEP02649 317 aa17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 SLC2A3P11169 496 aa17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 GPD1P21695 349 aa17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 CCR1P32246 355 aa17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 CHKAP35790 457 aa17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 SLC11A2P49281 568 aa17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 GALCP54803 685 aa17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 RPL7AP62424 266 aaKnown RBP17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 DEUP1Q05D60 604 aa17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 PPP2R5DQ14738 602 aa17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 CCDC14Q49A88 953 aa17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 LY6G5CQ5SRR4 150 aa17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 TPRG1Q6ZUI0 275 aa17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 RALGPS2Q86X27 583 aaPredicted RBP17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 FAM217AQ8IXS0 508 aa17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 CPXM2Q8N436 756 aa17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 SHDQ96IW2 340 aa17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 THAP2Q9H0W7 228 aa17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 MRPL47Q9HD33 250 aaKnown RBP17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 SPHK2Q9NRA0 654 aa17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 PIGVQ9NUD9 493 aa17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 SPTLC3Q9NUV7 552 aa17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 COX16Q9P0S2 106 aa17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 MYO1AQ9UBC5 1043 aa17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 TECTAO75443 2155 aa17.78■□□□□ 0.44
RABGGTA-203ENST00000543002 TMEM221A6NGB7 291 aa17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 KCNU1A8MYU2 1149 aa17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 SPECC1L-ADORA2AF8WAN1 911 aa17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 M0R296 226 aa17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 DLL1O00548 723 aa17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 ACSL4O60488 711 aa17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 ADH1CP00326 375 aa17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 CTHP32929 405 aa17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 GJA4P35212 333 aa17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 SOX9P48436 509 aa17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 CXCR3P49682 368 aa17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 MRE11P49959 708 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms