RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 TADA2AO75478 443 aa17.88■□□□□ 0.45
TMEM50B-210ENST00000542230 STIP1P31948 543 aaKnown RBP17.88■□□□□ 0.45
TMEM50B-210ENST00000542230 SEC24CP53992 1094 aa17.88■□□□□ 0.45
TMEM50B-210ENST00000542230 PPP2R2AP63151 447 aa17.88■□□□□ 0.45
TMEM50B-210ENST00000542230 DDR2Q16832 855 aa17.88■□□□□ 0.45
TMEM50B-210ENST00000542230 PM20D1Q6GTS8 502 aa17.88■□□□□ 0.45
TMEM50B-210ENST00000542230 DEFB128Q7Z7B8 93 aa17.88■□□□□ 0.45
TMEM50B-210ENST00000542230 RELL1Q8IUW5 271 aa17.88■□□□□ 0.45
TMEM50B-210ENST00000542230 SCN4BQ8IWT1 228 aa17.88■□□□□ 0.45
TMEM50B-210ENST00000542230 TSPYL1Q9H0U9 437 aa17.88■□□□□ 0.45
TMEM50B-210ENST00000542230 KIAA0100Q14667 2235 aaKnown RBP17.88■□□□□ 0.45
TMEM50B-210ENST00000542230 NUP205Q92621 2012 aa17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 CLUHO75153 1309 aa17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 METTL18O95568 372 aa17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 CCL5P13501 91 aa17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 VAV1P15498 845 aa17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 TYMPP19971 482 aa17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 MDH1P40925 334 aaKnown RBP17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 SLC5A3P53794 718 aa17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 GPX6P59796 221 aa17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 HIF1AQ16665 826 aa17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 C6orf118Q5T5N4 469 aa17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 TAC4Q86UU9 113 aa17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 SPATA2LQ8IUW3 424 aaPredicted RBP17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 FAM193BQ96PV7 902 aaPredicted RBP17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 PCDHB7Q9Y5E2 793 aa17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 ALOX15BO15296 676 aa17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 GCAP28676 217 aa17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 SSTR1P30872 391 aa17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 CYP2C18P33260 490 aa17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 ARL4AP40617 200 aa17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 TNFAIP8L3Q5GJ75 292 aa17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 VARS2Q5ST30 1063 aaKnown RBP17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 FAM171A1Q5VUB5 890 aa17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 RSPO2Q6UXX9 243 aaPredicted RBP17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 ATAD1Q8NBU5 361 aa17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 NCAPGQ9BPX3 1015 aa17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 COLEC11Q9BWP8 271 aa17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 FTHL17Q9BXU8 183 aa17.87■□□□□ 0.45
TMEM50B-210ENST00000542230 BCLAF3A2AJT9 711 aaKnown RBP17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 TNFRSF10BO14763 440 aa17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 EIF3HO15372 352 aaKnown RBP eCLIP17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 LSP1P33241 339 aa17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 ARPP19P56211 112 aa17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 BFSP2Q13515 415 aa17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 BBS9Q3SYG4 887 aa17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 TAS1R1Q7RTX1 841 aa17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 EXOC3L1Q86VI1 746 aa17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 VPS37BQ9H9H4 285 aa17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 FBXW11Q9UKB1 542 aa17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 MSI1O43347 362 aaKnown RBP17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 OAZ2O95190 189 aa17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 SLC11A1P49279 550 aa17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 MNX1P50219 401 aaPredicted RBP17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 KCNJ11Q14654 390 aa17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 EFTUD2Q15029 972 aaKnown RBP eCLIP17.86■□□□□ 0.452e-6■■□□□ 14.1
TMEM50B-210ENST00000542230 ARHGEF6Q15052 776 aa17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 SCD5Q86SK9 330 aa17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 VSIG1Q86XK7 387 aa17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 ABI1Q8IZP0 508 aa17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 CRIPAKQ8N1N5 446 aa17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 BCL7CQ8WUZ0 217 aaPredicted RBP17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 NMUR1Q9HB89 426 aa17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 ETNK1Q9HBU6 452 aa17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 OSER1Q9NX31 292 aa17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 MARCH5Q9NX47 278 aa17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 SFMBT1Q9UHJ3 866 aa17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.86■□□□□ 0.45
TMEM50B-210ENST00000542230 PRMT2P55345 433 aa17.85■□□□□ 0.45
TMEM50B-210ENST00000542230 USP46P62068 366 aa17.85■□□□□ 0.45
TMEM50B-210ENST00000542230 SLC45A4Q5BKX6 768 aa17.85■□□□□ 0.45
TMEM50B-210ENST00000542230 EFHC2Q5JST6 749 aa17.85■□□□□ 0.45
TMEM50B-210ENST00000542230 RFX8Q6ZV50 586 aa17.85■□□□□ 0.45
TMEM50B-210ENST00000542230 CENPUQ71F23 418 aa17.85■□□□□ 0.45
TMEM50B-210ENST00000542230 DQX1Q8TE96 717 aaKnown RBP17.85■□□□□ 0.45
TMEM50B-210ENST00000542230 DIS3LQ8TF46 1054 aaKnown RBP17.85■□□□□ 0.45
TMEM50B-210ENST00000542230 RTP4Q96DX8 246 aa17.85■□□□□ 0.45
TMEM50B-210ENST00000542230 OLFM3Q96PB7 478 aa17.85■□□□□ 0.45
TMEM50B-210ENST00000542230 SELENOSQ9BQE4 189 aa17.85■□□□□ 0.45
TMEM50B-210ENST00000542230 TKTL2Q9H0I9 626 aa17.85■□□□□ 0.45
TMEM50B-210ENST00000542230 ZCWPW1Q9H0M4 648 aa17.85■□□□□ 0.45
TMEM50B-210ENST00000542230 ZNF487B1APH4 448 aa17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 EEF2KO00418 725 aaKnown RBP17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 UPP2O95045 317 aa17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 GRIA1P42261 906 aa17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 DPYSQ14117 519 aa17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 ZSCAN26Q16670 478 aa17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 TMCO2Q7Z6W1 182 aaPredicted RBP17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 NPWQ8N729 165 aa17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 FBXO36Q8NEA4 188 aa17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 TRIM56Q9BRZ2 755 aaKnown RBP17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 CRISPLD1Q9H336 500 aa17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 PPANQ9NQ55 473 aaKnown RBP17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 SAGE1Q9NXZ1 904 aa17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 ADAM28Q9UKQ2 775 aa17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 OGDHLQ9ULD0 1010 aa17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 SLC27A5Q9Y2P5 690 aa17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 DGKIO75912 1065 aa17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 APRTP07741 180 aa17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 FAAP100Q0VG06 881 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms