RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 PLD4Q96BZ4 506 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 SLC39A13Q96H72 371 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 FCRL2Q96LA5 508 aaPredicted RBP10.15□□□□□ -0.78
YBX3-212ENST00000542002 SLC2A13Q96QE2 648 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 PNKPQ96T60 521 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 BBS2Q9BXC9 721 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 POPDC2Q9HBU9 364 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 MARK1Q9P0L2 795 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 XPO7Q9UIA9 1087 aaKnown RBP10.15□□□□□ -0.78
YBX3-212ENST00000542002 STOML2Q9UJZ1 356 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 LSM7Q9UK45 103 aaKnown RBP10.15□□□□□ -0.78
YBX3-212ENST00000542002 FBXO10Q9UK96 956 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 FBXO4Q9UKT5 387 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 STRIP2Q9ULQ0 834 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 HBS1LQ9Y450 684 aaKnown RBP10.15□□□□□ -0.78
YBX3-212ENST00000542002 R4GN57 208 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 CHURC1-FNTBB4DL54 471 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 PRRT4C9JH25 899 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 CACNG3O60359 315 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 TSPAN3O60637 253 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 HNRNPLP14866 589 aaKnown RBP eCLIP10.14□□□□□ -0.79
YBX3-212ENST00000542002 SLC6A4P31645 630 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 PBX1P40424 430 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 EIF2DP41214 584 aaKnown RBP10.14□□□□□ -0.79
YBX3-212ENST00000542002 NBL1P41271 181 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 GRIA2P42262 883 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 KIR2DL1P43626 348 aaPredicted RBP10.14□□□□□ -0.79
YBX3-212ENST00000542002 TBX4P57082 545 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 NOMO3P69849 1222 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 CDR2Q01850 454 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 SLC6A3Q01959 620 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 PTP4A2Q12974 167 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 C2orf27AQ580R0 203 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 DCAF6Q58WW2 860 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 FAM133BQ5BKY9 247 aaKnown RBP10.14□□□□□ -0.79
YBX3-212ENST00000542002 ZC3H12AQ5D1E8 599 aaKnown RBP10.14□□□□□ -0.79
YBX3-212ENST00000542002 OTUD1Q5VV17 481 aaPredicted RBP10.14□□□□□ -0.79
YBX3-212ENST00000542002 NAA35Q5VZE5 725 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 E4F1Q66K89 784 aaPredicted RBP10.14□□□□□ -0.79
YBX3-212ENST00000542002 NADSYN1Q6IA69 706 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 TRNP1Q6NT89 227 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 RFWD3Q6PCD5 774 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 XYLT1Q86Y38 959 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 TMEM35BQ8NCS4 154 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 RPLP0P6Q8NHW5 317 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 USP33Q8TEY7 942 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 FAM122AQ96E09 287 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 SPAG5Q96R06 1193 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 DCLK3Q9C098 648 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 TTYH3Q9C0H2 523 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 ARHGEF4Q9NR80 690 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 WDR35Q9P2L0 1181 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 ZNF510Q9Y2H8 683 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 MUC6Q6W4X9 2439 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 MYH10P35580 1976 aa10.14□□□□□ -0.79
YBX3-212ENST00000542002 HELZP42694 1942 aaKnown RBP10.13□□□□□ -0.79
YBX3-212ENST00000542002 A0A1W2PQC6 194 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 KCNU1A8MYU2 1149 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 I6L893 689 aaPredicted RBP10.13□□□□□ -0.79
YBX3-212ENST00000542002 CAPN9O14815 690 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 SART1O43290 800 aaKnown RBP10.13□□□□□ -0.79
YBX3-212ENST00000542002 ADAM23O75077 832 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 LSM8O95777 96 aaKnown RBP10.13□□□□□ -0.79
YBX3-212ENST00000542002 TRUB2O95900 331 aaKnown RBP10.13□□□□□ -0.79
YBX3-212ENST00000542002 SERPINC1P01008 464 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 GLI1P08151 1106 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 UNGP13051 313 aaPredicted RBP10.13□□□□□ -0.79
YBX3-212ENST00000542002 CHKAP35790 457 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 TNFRSF4P43489 277 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 PXNP49023 591 aaPredicted RBP10.13□□□□□ -0.79
YBX3-212ENST00000542002 HARS2P49590 506 aaKnown RBP10.13□□□□□ -0.79
YBX3-212ENST00000542002 RNASE9P60153 205 aaKnown RBP10.13□□□□□ -0.79
YBX3-212ENST00000542002 RING1Q06587 406 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 ZNF528Q3MIS6 628 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 RAB6CQ53S08 254 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 EFHC1Q5JVL4 640 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 ADGRF1Q5T601 910 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 ERICH1Q86X53 443 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 ZNF677Q86XU0 584 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 CPXM2Q8N436 756 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 CCDC33Q8N5R6 958 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 ZBTB44Q8NCP5 570 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 GOLGA1Q92805 767 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 C18orf8Q96DM3 657 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 SYT11Q9BT88 431 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 RAB6CQ9H0N0 254 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 PDCL3Q9H2J4 239 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 ANLNQ9NQW6 1124 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 DNAJC17Q9NVM6 304 aaKnown RBP10.13□□□□□ -0.79
YBX3-212ENST00000542002 ASNSD1Q9NWL6 643 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 DEC1Q9P2X7 70 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 TMEM59LQ9UK28 342 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 TLR6Q9Y2C9 796 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 DAAM1Q9Y4D1 1078 aa10.13□□□□□ -0.79
YBX3-212ENST00000542002 TBC1D3BA6NDS4 549 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 LRRC53A6NM62 1247 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 PROB1E7EW31 1015 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 IRAK2O43187 625 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 HRO43593 1189 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 ACSL4O60488 711 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms