RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 ADGRF1Q5T601 910 aa19.54■□□□□ 0.72
VPS33A-205ENST00000541169 ALKBH5Q6P6C2 394 aaKnown RBP19.54■□□□□ 0.72
VPS33A-205ENST00000541169 TAC4Q86UU9 113 aa19.54■□□□□ 0.72
VPS33A-205ENST00000541169 SUGP1Q8IWZ8 645 aaKnown RBP19.54■□□□□ 0.72
VPS33A-205ENST00000541169 FAM217AQ8IXS0 508 aa19.54■□□□□ 0.72
VPS33A-205ENST00000541169 SIX5Q8N196 739 aa19.54■□□□□ 0.72
VPS33A-205ENST00000541169 TC2NQ8N9U0 490 aa19.54■□□□□ 0.72
VPS33A-205ENST00000541169 CCDC26Q8TAB7 109 aa19.54■□□□□ 0.72
VPS33A-205ENST00000541169 OLIG1Q8TAK6 271 aa19.54■□□□□ 0.72
VPS33A-205ENST00000541169 RIN3Q8TB24 985 aa19.54■□□□□ 0.72
VPS33A-205ENST00000541169 ASIC4Q96FT7 647 aa19.54■□□□□ 0.72
VPS33A-205ENST00000541169 SLC39A13Q96H72 371 aa19.54■□□□□ 0.72
VPS33A-205ENST00000541169 PIWIL1Q96J94 861 aaKnown RBP19.54■□□□□ 0.72
VPS33A-205ENST00000541169 ZFYVE19Q96K21 471 aa19.54■□□□□ 0.72
VPS33A-205ENST00000541169 BTN2A3PQ96KV6 586 aa19.54■□□□□ 0.72
VPS33A-205ENST00000541169 NPY6RQ99463 290 aa19.54■□□□□ 0.72
VPS33A-205ENST00000541169 NCAPGQ9BPX3 1015 aa19.54■□□□□ 0.72
VPS33A-205ENST00000541169 MFSD1Q9H3U5 465 aa19.54■□□□□ 0.72
VPS33A-205ENST00000541169 DDIT4Q9NX09 232 aa19.54■□□□□ 0.72
VPS33A-205ENST00000541169 LCMT1Q9UIC8 334 aa19.54■□□□□ 0.72
VPS33A-205ENST00000541169 PIAS3Q9Y6X2 628 aa19.54■□□□□ 0.72
VPS33A-205ENST00000541169 A0A087X0T9 212 aa19.53■□□□□ 0.72
VPS33A-205ENST00000541169 NCAM2O15394 837 aa19.53■□□□□ 0.72
VPS33A-205ENST00000541169 GPR37L1O60883 481 aa19.53■□□□□ 0.72
VPS33A-205ENST00000541169 GRAP2O75791 330 aa19.53■□□□□ 0.72
VPS33A-205ENST00000541169 CYBBP04839 570 aa19.53■□□□□ 0.72
VPS33A-205ENST00000541169 FAM228BP0C875 321 aa19.53■□□□□ 0.72
VPS33A-205ENST00000541169 PDGFRAP16234 1089 aa19.53■□□□□ 0.72
VPS33A-205ENST00000541169 ABCB4P21439 1286 aa19.53■□□□□ 0.72
VPS33A-205ENST00000541169 EIF4A3P38919 411 aaKnown RBP19.53■□□□□ 0.72
VPS33A-205ENST00000541169 EIF2DP41214 584 aaKnown RBP19.53■□□□□ 0.72
VPS33A-205ENST00000541169 GAD2Q05329 585 aa19.53■□□□□ 0.72
VPS33A-205ENST00000541169 EIF4EBP2Q13542 120 aaPredicted RBP19.53■□□□□ 0.72
VPS33A-205ENST00000541169 PLEKHA7Q6IQ23 1121 aa19.53■□□□□ 0.72
VPS33A-205ENST00000541169 DCUN1D2Q6PH85 259 aa19.53■□□□□ 0.72
VPS33A-205ENST00000541169 BBS7Q8IWZ6 715 aa19.53■□□□□ 0.72
VPS33A-205ENST00000541169 CCDC170Q8IYT3 715 aa19.53■□□□□ 0.72
VPS33A-205ENST00000541169 ATP6V0D2Q8N8Y2 350 aa19.53■□□□□ 0.72
VPS33A-205ENST00000541169 LINC00597Q9H2U6 94 aa19.53■□□□□ 0.72
VPS33A-205ENST00000541169 NHEJ1Q9H9Q4 299 aaPredicted RBP19.53■□□□□ 0.72
VPS33A-205ENST00000541169 LUC7LQ9NQ29 371 aaKnown RBP19.53■□□□□ 0.72
VPS33A-205ENST00000541169 HPS4Q9NQG7 708 aa19.53■□□□□ 0.72
VPS33A-205ENST00000541169 SPHK2Q9NRA0 654 aa19.53■□□□□ 0.72
VPS33A-205ENST00000541169 METTL5Q9NRN9 209 aaKnown RBP19.53■□□□□ 0.72
VPS33A-205ENST00000541169 HEBP1Q9NRV9 189 aa19.53■□□□□ 0.72
VPS33A-205ENST00000541169 GTSE1Q9NYZ3 720 aa19.53■□□□□ 0.72
VPS33A-205ENST00000541169 MARK1Q9P0L2 795 aa19.53■□□□□ 0.72
VPS33A-205ENST00000541169 AGO1Q9UL18 857 aaKnown RBP19.53■□□□□ 0.72
VPS33A-205ENST00000541169 TICRRQ7Z2Z1 1910 aa19.53■□□□□ 0.72
VPS33A-205ENST00000541169 COL4A2P08572 1712 aa19.52■□□□□ 0.72
VPS33A-205ENST00000541169 TCRBV5S1A1TA0A578 114 aa19.52■□□□□ 0.72
VPS33A-205ENST00000541169 TMCO5BA8MYB1 307 aa19.52■□□□□ 0.72
VPS33A-205ENST00000541169 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.52■□□□□ 0.72
VPS33A-205ENST00000541169 SPECC1L-ADORA2AF8WAN1 911 aa19.52■□□□□ 0.72
VPS33A-205ENST00000541169 M0QYT0 321 aa19.52■□□□□ 0.72
VPS33A-205ENST00000541169 HOXC11O43248 304 aaPredicted RBP19.52■□□□□ 0.72
VPS33A-205ENST00000541169 MSI1O43347 362 aaKnown RBP19.52■□□□□ 0.72
VPS33A-205ENST00000541169 KLKB1P03952 638 aa19.52■□□□□ 0.72
VPS33A-205ENST00000541169 HMBSP08397 361 aa19.52■□□□□ 0.72
VPS33A-205ENST00000541169 PLEKP08567 350 aaPredicted RBP19.52■□□□□ 0.72
VPS33A-205ENST00000541169 RRM1P23921 792 aa19.52■□□□□ 0.72
VPS33A-205ENST00000541169 GSDMDP57764 484 aa19.52■□□□□ 0.72
VPS33A-205ENST00000541169 DHCR24Q15392 516 aa19.52■□□□□ 0.72
VPS33A-205ENST00000541169 ASTE1Q2TB18 679 aaPredicted RBP19.52■□□□□ 0.72
VPS33A-205ENST00000541169 C2CD6Q53TS8 623 aa19.52■□□□□ 0.72
VPS33A-205ENST00000541169 CCDC122Q5T0U0 273 aa19.52■□□□□ 0.72
VPS33A-205ENST00000541169 NUDT18Q6ZVK8 323 aa19.52■□□□□ 0.72
VPS33A-205ENST00000541169 STRADAQ7RTN6 431 aa19.52■□□□□ 0.72
VPS33A-205ENST00000541169 TMTC1Q8IUR5 882 aa19.52■□□□□ 0.72
VPS33A-205ENST00000541169 DENND1CQ8IV53 801 aa19.52■□□□□ 0.72
VPS33A-205ENST00000541169 ZNF557Q8N988 423 aaPredicted RBP19.52■□□□□ 0.72
VPS33A-205ENST00000541169 FNIP1Q8TF40 1166 aa19.52■□□□□ 0.72
VPS33A-205ENST00000541169 RNF34Q969K3 372 aa19.52■□□□□ 0.72
VPS33A-205ENST00000541169 FCRL2Q96LA5 508 aaPredicted RBP19.52■□□□□ 0.72
VPS33A-205ENST00000541169 TAS2R14Q9NYV8 317 aa19.52■□□□□ 0.72
VPS33A-205ENST00000541169 CA14Q9ULX7 337 aa19.52■□□□□ 0.72
VPS33A-205ENST00000541169 VCANP13611 3396 aa19.51■□□□□ 0.71
VPS33A-205ENST00000541169 KANSL1LA0AUZ9 987 aa19.51■□□□□ 0.71
VPS33A-205ENST00000541169 C2CD4BA6NLJ0 364 aa19.51■□□□□ 0.71
VPS33A-205ENST00000541169 PRR33A8MZF0 331 aa19.51■□□□□ 0.71
VPS33A-205ENST00000541169 ENDOD1O94919 500 aa19.51■□□□□ 0.71
VPS33A-205ENST00000541169 ADH5P11766 374 aa19.51■□□□□ 0.71
VPS33A-205ENST00000541169 CTHP32929 405 aa19.51■□□□□ 0.71
VPS33A-205ENST00000541169 RDXP35241 583 aaKnown RBP19.51■□□□□ 0.71
VPS33A-205ENST00000541169 FLT3P36888 993 aa19.51■□□□□ 0.71
VPS33A-205ENST00000541169 MAGEA9P43362 315 aa19.51■□□□□ 0.71
VPS33A-205ENST00000541169 SULT1E1P49888 294 aa19.51■□□□□ 0.71
VPS33A-205ENST00000541169 CLCN5P51795 746 aa19.51■□□□□ 0.71
VPS33A-205ENST00000541169 ZNF143P52747 638 aaPredicted RBP19.51■□□□□ 0.71
VPS33A-205ENST00000541169 DEUP1Q05D60 604 aa19.51■□□□□ 0.71
VPS33A-205ENST00000541169 TNK2Q07912 1038 aa19.51■□□□□ 0.71
VPS33A-205ENST00000541169 MAMLD1Q13495 774 aa19.51■□□□□ 0.71
VPS33A-205ENST00000541169 PPP1R15BQ5SWA1 713 aa19.51■□□□□ 0.71
VPS33A-205ENST00000541169 MPP7Q5T2T1 576 aa19.51■□□□□ 0.71
VPS33A-205ENST00000541169 TRIM68Q6AZZ1 485 aa19.51■□□□□ 0.71
VPS33A-205ENST00000541169 TPRG1Q6ZUI0 275 aa19.51■□□□□ 0.71
VPS33A-205ENST00000541169 FAM3CQ92520 227 aa19.51■□□□□ 0.71
VPS33A-205ENST00000541169 ZNF653Q96CK0 615 aa19.51■□□□□ 0.71
VPS33A-205ENST00000541169 XPO6Q96QU8 1125 aaKnown RBP19.51■□□□□ 0.71
VPS33A-205ENST00000541169 EPHX3Q9H6B9 360 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms