RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 CDK7P50613 346 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 NRLP54845 237 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 CDC16Q13042 620 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 DPYSL2Q16555 572 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 TMEM132AQ24JP5 1023 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 RABGAP1LQ5R372 815 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 MROH9Q5TGP6 573 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 MBLAC2Q68D91 279 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 PGM2L1Q6PCE3 622 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 EP400NLQ6ZTU2 488 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 FAM183BPQ6ZVS7 135 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 ZNF534Q76KX8 674 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 DHDDSQ86SQ9 333 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 ADGRF2Q8IZF7 708 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 ST13P4Q8IZP2 240 aaPredicted RBP13.69□□□□□ -0.22
UBE3B-209ENST00000539584 CXorf38Q8TB03 319 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 FERMT1Q9BQL6 677 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 NT5C1AQ9BXI3 368 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 SMYD3Q9H7B4 428 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 DMAP1Q9NPF5 467 aaPredicted RBP13.69□□□□□ -0.22
UBE3B-209ENST00000539584 MAD1L1Q9Y6D9 718 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 INO80B-WBP1J3KQ70 363 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 CYB561D2O14569 222 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 BUD23O43709 281 aaKnown RBP13.68□□□□□ -0.22
UBE3B-209ENST00000539584 PEX1O43933 1283 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 ITGBL1O95965 494 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-209ENST00000539584 ITGB3P05106 788 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 CXCL8P10145 99 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 SLC1A6P48664 564 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 SLC6A3Q01959 620 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 TUBB3Q13509 450 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 SH3D19Q5HYK7 790 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 METTL21CQ5VZV1 264 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 SDCCAG8Q86SQ7 713 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-209ENST00000539584 TMEM110Q86TL2 294 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 PDSS2Q86YH6 399 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 NCSTNQ92542 709 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 WRNIP1Q96S55 665 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 INO80BQ9C086 356 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-209ENST00000539584 RTN3O95197 1032 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-209ENST00000539584 KITP10721 976 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 PTPN9P43378 593 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 HIRAP54198 1017 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-209ENST00000539584 RBP5P82980 135 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 DEUP1Q05D60 604 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 BMPR2Q13873 1038 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 C15orf59Q2T9L4 293 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-209ENST00000539584 FSCBQ5H9T9 825 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 TEDDM1Q5T9Z0 273 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 NBPF12Q5TAG4 269 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-209ENST00000539584 OLFML1Q6UWY5 402 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 RIOX2Q8IUF8 465 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 OR6Y1Q8NGX8 325 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 AZIN2Q96A70 460 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 DTNBP1Q96EV8 351 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 HPDLQ96IR7 371 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 QKIQ96PU8 341 aaKnown RBP eCLIP13.68□□□□□ -0.22
UBE3B-209ENST00000539584 BTBD9Q96Q07 612 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 TTC1Q99614 292 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 SNRNP25Q9BV90 132 aaKnown RBP13.68□□□□□ -0.22
UBE3B-209ENST00000539584 SLC4A5Q9BY07 1137 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 TSPAN16Q9UKR8 245 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 TBC1D30Q9Y2I9 924 aa13.68□□□□□ -0.22
UBE3B-209ENST00000539584 KLHL33A6NCF5 533 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 A6NJR5 290 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 LACTBL1A8MY62 500 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 ZBTB42B2RXF5 422 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 PLIN3O60664 434 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 BAG2O95816 211 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 GSRP00390 522 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 NFICP08651 508 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 STAG3L1P0CL83 205 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 FGF3P11487 239 aaPredicted RBP13.67□□□□□ -0.22
UBE3B-209ENST00000539584 MX2P20592 715 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 CYP2F1P24903 491 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 RAB27AP51159 221 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 MBTD1Q05BQ5 628 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 NIPAL4Q0D2K0 466 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 MED21Q13503 144 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 CCDC153Q494R4 210 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 NOL9Q5SY16 702 aaKnown RBP13.67□□□□□ -0.22
UBE3B-209ENST00000539584 SH3PXD2AQ5TCZ1 1133 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 CES4AQ5XG92 561 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 HEATR6Q6AI08 1181 aaKnown RBP13.67□□□□□ -0.22
UBE3B-209ENST00000539584 TRNP1Q6NT89 227 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 SCYL2Q6P3W7 929 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 LRRC8BQ6P9F7 803 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 POTEAQ6S8J7 498 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 RASSF3Q86WH2 238 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 IFNLR1Q8IU57 520 aaPredicted RBP13.67□□□□□ -0.22
UBE3B-209ENST00000539584 NME8Q8N427 588 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 FBXO27Q8NI29 283 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 SREK1Q8WXA9 508 aaKnown RBP13.67□□□□□ -0.22
UBE3B-209ENST00000539584 KLHL4Q9C0H6 718 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 C20orf27Q9GZN8 174 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 RCOR3Q9P2K3 495 aaPredicted RBP13.67□□□□□ -0.22
UBE3B-209ENST00000539584 MARCOQ9UEW3 520 aaPredicted RBP13.67□□□□□ -0.22
UBE3B-209ENST00000539584 HACL1Q9UJ83 578 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 DNAJC16Q9Y2G8 782 aa13.67□□□□□ -0.22
UBE3B-209ENST00000539584 CCDC195A0A1B0GUA6 201 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms