RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 KCNT2Q6UVM3 1135 aa15.34■□□□□ 0.05
ATL3-203ENST00000538786 CTU1Q7Z7A3 348 aaKnown RBP15.34■□□□□ 0.05
ATL3-203ENST00000538786 CCDC13Q8IYE1 715 aa15.34■□□□□ 0.05
ATL3-203ENST00000538786 RIBC1Q8N443 379 aaPredicted RBP15.34■□□□□ 0.05
ATL3-203ENST00000538786 ADAM32Q8TC27 787 aa15.34■□□□□ 0.05
ATL3-203ENST00000538786 SH3TC2Q8TF17 1288 aa15.34■□□□□ 0.05
ATL3-203ENST00000538786 PYROXD1Q8WU10 500 aa15.34■□□□□ 0.05
ATL3-203ENST00000538786 ARHGEF2Q92974 986 aaKnown RBP15.34■□□□□ 0.05
ATL3-203ENST00000538786 CENPTQ96BT3 561 aa15.34■□□□□ 0.05
ATL3-203ENST00000538786 FAM193BQ96PV7 902 aaPredicted RBP15.34■□□□□ 0.05
ATL3-203ENST00000538786 FRMD8Q9BZ67 464 aaPredicted RBP15.34■□□□□ 0.05
ATL3-203ENST00000538786 VPS37BQ9H9H4 285 aa15.34■□□□□ 0.05
ATL3-203ENST00000538786 PPCSQ9HAB8 311 aa15.34■□□□□ 0.05
ATL3-203ENST00000538786 TMPRSS4Q9NRS4 437 aa15.34■□□□□ 0.05
ATL3-203ENST00000538786 ETNK2Q9NVF9 386 aa15.34■□□□□ 0.05
ATL3-203ENST00000538786 DDIT4Q9NX09 232 aa15.34■□□□□ 0.05
ATL3-203ENST00000538786 CTNNAL1Q9UBT7 734 aa15.34■□□□□ 0.05
ATL3-203ENST00000538786 TRIM17Q9Y577 477 aa15.34■□□□□ 0.05
ATL3-203ENST00000538786 CENPFP49454 3210 aa15.34■□□□□ 0.05
ATL3-203ENST00000538786 EXOC1LA0A1B0GW35 172 aa15.33■□□□□ 0.05
ATL3-203ENST00000538786 ENPP3O14638 875 aa15.33■□□□□ 0.05
ATL3-203ENST00000538786 TSHRP16473 764 aa15.33■□□□□ 0.05
ATL3-203ENST00000538786 ARL13BQ3SXY8 428 aa15.33■□□□□ 0.05
ATL3-203ENST00000538786 PLEKHG4Q58EX7 1191 aa15.33■□□□□ 0.05
ATL3-203ENST00000538786 BSPRYQ5W0U4 402 aa15.33■□□□□ 0.05
ATL3-203ENST00000538786 RFX8Q6ZV50 586 aa15.33■□□□□ 0.05
ATL3-203ENST00000538786 BEND5Q7L4P6 421 aa15.33■□□□□ 0.05
ATL3-203ENST00000538786 EXOC3L1Q86VI1 746 aa15.33■□□□□ 0.05
ATL3-203ENST00000538786 ANKMY2Q8IV38 441 aa15.33■□□□□ 0.05
ATL3-203ENST00000538786 ATP11CQ8NB49 1132 aa15.33■□□□□ 0.05
ATL3-203ENST00000538786 SELENOSQ9BQE4 189 aa15.33■□□□□ 0.05
ATL3-203ENST00000538786 COLEC11Q9BWP8 271 aa15.33■□□□□ 0.05
ATL3-203ENST00000538786 KLC2Q9H0B6 622 aa15.33■□□□□ 0.05
ATL3-203ENST00000538786 UNC93B1Q9H1C4 597 aa15.33■□□□□ 0.05
ATL3-203ENST00000538786 EURLQ9NYK6 297 aa15.33■□□□□ 0.05
ATL3-203ENST00000538786 C5orf60A6NFR6 353 aa15.33■□□□□ 0.04
ATL3-203ENST00000538786 EEF2KO00418 725 aaKnown RBP15.33■□□□□ 0.04
ATL3-203ENST00000538786 PITPNM1O00562 1244 aa15.33■□□□□ 0.04
ATL3-203ENST00000538786 CREB3O43889 395 aa15.33■□□□□ 0.04
ATL3-203ENST00000538786 BANF1O75531 89 aa15.33■□□□□ 0.04
ATL3-203ENST00000538786 PHBP35232 272 aa15.33■□□□□ 0.04
ATL3-203ENST00000538786 MAGEA6P43360 314 aa15.33■□□□□ 0.04
ATL3-203ENST00000538786 HCAR3P49019 387 aa15.33■□□□□ 0.04
ATL3-203ENST00000538786 HNRNPH2P55795 449 aaKnown RBP15.33■□□□□ 0.04
ATL3-203ENST00000538786 DPYSQ14117 519 aa15.33■□□□□ 0.04
ATL3-203ENST00000538786 GPNMBQ14956 572 aa15.33■□□□□ 0.04
ATL3-203ENST00000538786 TDRPQ86YL5 185 aa15.33■□□□□ 0.04
ATL3-203ENST00000538786 DBF4BQ8NFT6 615 aa15.33■□□□□ 0.04
ATL3-203ENST00000538786 MDM1Q8TC05 714 aa15.33■□□□□ 0.04
ATL3-203ENST00000538786 TFB1MQ8WVM0 346 aaKnown RBP15.33■□□□□ 0.04
ATL3-203ENST00000538786 EDEM1Q92611 657 aa15.33■□□□□ 0.04
ATL3-203ENST00000538786 ZCWPW1Q9H0M4 648 aa15.33■□□□□ 0.04
ATL3-203ENST00000538786 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.33■□□□□ 0.04
ATL3-203ENST00000538786 DNAJB4Q9UDY4 337 aa15.33■□□□□ 0.04
ATL3-203ENST00000538786 MFHAS1Q9Y4C4 1052 aa15.33■□□□□ 0.04
ATL3-203ENST00000538786 CHN1P15882 459 aa15.32■□□□□ 0.04
ATL3-203ENST00000538786 CXCR3P49682 368 aa15.32■□□□□ 0.04
ATL3-203ENST00000538786 GPX6P59796 221 aa15.32■□□□□ 0.04
ATL3-203ENST00000538786 SEMA3BQ13214 749 aa15.32■□□□□ 0.04
ATL3-203ENST00000538786 PAFAH1B3Q15102 231 aaKnown RBP15.32■□□□□ 0.04
ATL3-203ENST00000538786 BBS9Q3SYG4 887 aa15.32■□□□□ 0.04
ATL3-203ENST00000538786 CCDC38Q502W7 563 aa15.32■□□□□ 0.04
ATL3-203ENST00000538786 HEATR6Q6AI08 1181 aaKnown RBP15.32■□□□□ 0.04
ATL3-203ENST00000538786 DCP1BQ8IZD4 617 aaKnown RBP15.32■□□□□ 0.04
ATL3-203ENST00000538786 ABI1Q8IZP0 508 aa15.32■□□□□ 0.04
ATL3-203ENST00000538786 FBXO36Q8NEA4 188 aa15.32■□□□□ 0.04
ATL3-203ENST00000538786 CCDC110Q8TBZ0 833 aa15.32■□□□□ 0.04
ATL3-203ENST00000538786 SEPT8Q92599 483 aa15.32■□□□□ 0.04
ATL3-203ENST00000538786 WDR83Q9BRX9 315 aaKnown RBP15.32■□□□□ 0.04
ATL3-203ENST00000538786 PRG3Q9Y2Y8 225 aaPredicted RBP15.32■□□□□ 0.04
ATL3-203ENST00000538786 PCDHB7Q9Y5E2 793 aa15.32■□□□□ 0.04
ATL3-203ENST00000538786 HTTP42858 3142 aa15.32■□□□□ 0.04
ATL3-203ENST00000538786 COL4A4P53420 1690 aaPredicted RBP15.32■□□□□ 0.04
ATL3-203ENST00000538786 CLUHO75153 1309 aa15.32■□□□□ 0.04
ATL3-203ENST00000538786 SYN3O14994 580 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 MFSD11O43934 449 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 TADA2AO75478 443 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 GRIK1P39086 918 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 ZNF135P52742 658 aaPredicted RBP15.31■□□□□ 0.04
ATL3-203ENST00000538786 RASA2Q15283 850 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 SLC39A12Q504Y0 691 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 DNAH12Q6ZR08 3092 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 CYP4X1Q8N118 509 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 VPS52Q8N1B4 723 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 LRRN4Q8WUT4 740 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 HTR3CQ8WXA8 447 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 APBB2Q92870 758 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 WDCPQ9H6R7 721 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 PAK6Q9NQU5 681 aaPredicted RBP15.31■□□□□ 0.04
ATL3-203ENST00000538786 ANLNQ9NQW6 1124 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 FETUBQ9UGM5 382 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 I6L893 689 aaPredicted RBP15.31■□□□□ 0.04
ATL3-203ENST00000538786 NDUFAB1O14561 156 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 TNFRSF10BO14763 440 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 DCLK1O15075 740 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 OR4Q2P0C623 313 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 GCAP28676 217 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 SLC5A3P53794 718 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 PPARDQ03181 441 aa15.31■□□□□ 0.04
ATL3-203ENST00000538786 NR1H3Q13133 447 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms