RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 KRT37O76014 449 aa25.75■■□□□ 1.71
RAB40C-204ENST00000538492 MYL3P08590 195 aa25.75■■□□□ 1.71
RAB40C-204ENST00000538492 CSH1P0DML2 217 aa25.75■■□□□ 1.71
RAB40C-204ENST00000538492 CSH2P0DML3 217 aa25.75■■□□□ 1.71
RAB40C-204ENST00000538492 PRKCHP24723 683 aa25.75■■□□□ 1.71
RAB40C-204ENST00000538492 PNPLA4P41247 253 aa25.75■■□□□ 1.71
RAB40C-204ENST00000538492 AGAP11Q8TF27 550 aa25.75■■□□□ 1.71
RAB40C-204ENST00000538492 SNRPAP09012 282 aaKnown RBP25.75■■□□□ 1.71
RAB40C-204ENST00000538492 KCNE1P15382 129 aa25.75■■□□□ 1.71
RAB40C-204ENST00000538492 VAV1P15498 845 aa25.75■■□□□ 1.71
RAB40C-204ENST00000538492 ARL4AP40617 200 aa25.75■■□□□ 1.71
RAB40C-204ENST00000538492 PSEN2P49810 448 aa25.75■■□□□ 1.71
RAB40C-204ENST00000538492 ADAM17P78536 824 aa25.75■■□□□ 1.71
RAB40C-204ENST00000538492 SV2CQ496J9 727 aa25.75■■□□□ 1.71
RAB40C-204ENST00000538492 EFHC1Q5JVL4 640 aa25.75■■□□□ 1.71
RAB40C-204ENST00000538492 ARCQ7LC44 396 aa25.75■■□□□ 1.71
RAB40C-204ENST00000538492 UTP4Q969X6 686 aaKnown RBP25.75■■□□□ 1.71
RAB40C-204ENST00000538492 TNIP3Q96KP6 325 aa25.75■■□□□ 1.71
RAB40C-204ENST00000538492 SLC13A1Q9BZW2 595 aa25.75■■□□□ 1.71
RAB40C-204ENST00000538492 KANSL3Q9P2N6 904 aa25.75■■□□□ 1.71
RAB40C-204ENST00000538492 USP3Q9Y6I4 520 aa25.75■■□□□ 1.71
RAB40C-204ENST00000538492 C2CD2LO14523 706 aa25.74■■□□□ 1.71
RAB40C-204ENST00000538492 TRDMT1O14717 391 aaKnown RBP25.74■■□□□ 1.71
RAB40C-204ENST00000538492 XPOTO43592 962 aaKnown RBP25.74■■□□□ 1.71
RAB40C-204ENST00000538492 T-ENOLP0DO92 83 aa25.74■■□□□ 1.71
RAB40C-204ENST00000538492 SCNN1AP37088 669 aa25.74■■□□□ 1.71
RAB40C-204ENST00000538492 MAGEA3P43357 314 aa25.74■■□□□ 1.71
RAB40C-204ENST00000538492 NDUFV1P49821 464 aa25.74■■□□□ 1.71
RAB40C-204ENST00000538492 PREPLQ4J6C6 727 aaPredicted RBP25.74■■□□□ 1.71
RAB40C-204ENST00000538492 STRADAQ7RTN6 431 aa25.74■■□□□ 1.71
RAB40C-204ENST00000538492 SMG8Q8ND04 991 aaKnown RBP25.74■■□□□ 1.71
RAB40C-204ENST00000538492 ZFP42Q96MM3 310 aa25.74■■□□□ 1.71
RAB40C-204ENST00000538492 EBNA1BP2Q99848 306 aaKnown RBP25.74■■□□□ 1.71
RAB40C-204ENST00000538492 CEP41Q9BYV8 373 aa25.74■■□□□ 1.71
RAB40C-204ENST00000538492 PIH1D1Q9NWS0 290 aaKnown RBP25.74■■□□□ 1.71
RAB40C-204ENST00000538492 ZFP69BQ9UJL9 534 aa25.74■■□□□ 1.71
RAB40C-204ENST00000538492 CBLBQ13191 982 aa25.74■■□□□ 1.71
RAB40C-204ENST00000538492 TFB1MQ8WVM0 346 aaKnown RBP25.74■■□□□ 1.71
RAB40C-204ENST00000538492 HTR3CQ8WXA8 447 aa25.74■■□□□ 1.71
RAB40C-204ENST00000538492 FZD10Q9ULW2 581 aa25.74■■□□□ 1.71
RAB40C-204ENST00000538492 XPO1O14980 1071 aaKnown RBP25.73■■□□□ 1.71
RAB40C-204ENST00000538492 SERPINB4P48594 390 aa25.73■■□□□ 1.71
RAB40C-204ENST00000538492 RABGGTBP53611 331 aa25.73■■□□□ 1.71
RAB40C-204ENST00000538492 SLC25A52Q3SY17 297 aa25.73■■□□□ 1.71
RAB40C-204ENST00000538492 C4orf22Q6V702 233 aa25.73■■□□□ 1.71
RAB40C-204ENST00000538492 LRRC39Q96DD0 335 aa25.73■■□□□ 1.71
RAB40C-204ENST00000538492 MFSD11O43934 449 aa25.73■■□□□ 1.71
RAB40C-204ENST00000538492 TPSB2P20231 275 aa25.73■■□□□ 1.71
RAB40C-204ENST00000538492 CRADDP78560 199 aa25.73■■□□□ 1.71
RAB40C-204ENST00000538492 TPSAB1Q15661 275 aa25.73■■□□□ 1.71
RAB40C-204ENST00000538492 CCL14Q16627 93 aa25.73■■□□□ 1.71
RAB40C-204ENST00000538492 XKR4Q5GH76 650 aa25.73■■□□□ 1.71
RAB40C-204ENST00000538492 ANKRD20A2Q5SQ80 823 aa25.73■■□□□ 1.71
RAB40C-204ENST00000538492 WLSQ5T9L3 541 aa25.73■■□□□ 1.71
RAB40C-204ENST00000538492 ANKRD20A1Q5TYW2 823 aa25.73■■□□□ 1.71
RAB40C-204ENST00000538492 ANKRD20A3Q5VUR7 823 aa25.73■■□□□ 1.71
RAB40C-204ENST00000538492 SPRYD7Q5W111 196 aa25.73■■□□□ 1.71
RAB40C-204ENST00000538492 TWF2Q6IBS0 349 aaKnown RBP25.73■■□□□ 1.71
RAB40C-204ENST00000538492 CHSY1Q86X52 802 aa25.73■■□□□ 1.71
RAB40C-204ENST00000538492 GSDMBQ8TAX9 411 aa25.73■■□□□ 1.71
RAB40C-204ENST00000538492 MECRQ9BV79 373 aa25.73■■□□□ 1.71
RAB40C-204ENST00000538492 TRIM55Q9BYV6 548 aa25.73■■□□□ 1.71
RAB40C-204ENST00000538492 LRMDAQ9H2I8 198 aa25.73■■□□□ 1.71
RAB40C-204ENST00000538492 ARHGEF4Q9NR80 690 aa25.73■■□□□ 1.71
RAB40C-204ENST00000538492 ZNF180Q9UJW8 692 aa25.73■■□□□ 1.71
RAB40C-204ENST00000538492 NME3Q13232 169 aa25.72■■□□□ 1.71
RAB40C-204ENST00000538492 DUSP16Q9BY84 665 aa25.72■■□□□ 1.71
RAB40C-204ENST00000538492 GTF2IRD1Q9UHL9 959 aa25.72■■□□□ 1.71
RAB40C-204ENST00000538492 SCN4AP35499 1836 aa25.72■■□□□ 1.71
RAB40C-204ENST00000538492 UNCXA6NJT0 531 aa25.72■■□□□ 1.71
RAB40C-204ENST00000538492 CREB3O43889 395 aa25.72■■□□□ 1.71
RAB40C-204ENST00000538492 ATP5HO75947 161 aa25.72■■□□□ 1.71
RAB40C-204ENST00000538492 EZRP15311 586 aaKnown RBP25.72■■□□□ 1.71
RAB40C-204ENST00000538492 MROH9Q5TGP6 573 aa25.72■■□□□ 1.71
RAB40C-204ENST00000538492 OTUD1Q5VV17 481 aaPredicted RBP25.72■■□□□ 1.71
RAB40C-204ENST00000538492 WSCD1Q658N2 575 aa25.72■■□□□ 1.71
RAB40C-204ENST00000538492 UNC5BQ8IZJ1 945 aa25.72■■□□□ 1.71
RAB40C-204ENST00000538492 RFPL1O75677 317 aa25.71■■□□□ 1.71
RAB40C-204ENST00000538492 DGKIO75912 1065 aa25.71■■□□□ 1.71
RAB40C-204ENST00000538492 ZNF865P0CJ78 1059 aaPredicted RBP25.71■■□□□ 1.71
RAB40C-204ENST00000538492 AP1B1Q10567 949 aa25.71■■□□□ 1.71
RAB40C-204ENST00000538492 SEMA5AQ13591 1074 aa25.71■■□□□ 1.71
RAB40C-204ENST00000538492 PRKD1Q15139 912 aaPredicted RBP25.71■■□□□ 1.71
RAB40C-204ENST00000538492 LGSNQ5TDP6 509 aa25.71■■□□□ 1.71
RAB40C-204ENST00000538492 LIMS2Q7Z4I7 341 aa25.71■■□□□ 1.71
RAB40C-204ENST00000538492 OLFM3Q96PB7 478 aa25.71■■□□□ 1.71
RAB40C-204ENST00000538492 CEP350Q5VT06 3117 aa25.71■■□□□ 1.71
RAB40C-204ENST00000538492 CYB561D2O14569 222 aa25.71■■□□□ 1.71
RAB40C-204ENST00000538492 SLC8A3P57103 927 aa25.71■■□□□ 1.71
RAB40C-204ENST00000538492 MRPS5P82675 430 aaKnown RBP25.71■■□□□ 1.71
RAB40C-204ENST00000538492 SYPL2Q5VXT5 272 aa25.71■■□□□ 1.71
RAB40C-204ENST00000538492 CASC4Q6P4E1 433 aa25.71■■□□□ 1.71
RAB40C-204ENST00000538492 CLNKQ7Z7G1 428 aa25.71■■□□□ 1.71
RAB40C-204ENST00000538492 SLC7A6OSQ96CW6 309 aaPredicted RBP25.71■■□□□ 1.71
RAB40C-204ENST00000538492 RAB3IPQ96QF0 476 aaPredicted RBP25.71■■□□□ 1.71
RAB40C-204ENST00000538492 HNRNPABQ99729 332 aaKnown RBP25.71■■□□□ 1.71
RAB40C-204ENST00000538492 M0QYT0 321 aa25.7■■□□□ 1.71
RAB40C-204ENST00000538492 PTGESO14684 152 aa25.7■■□□□ 1.71
RAB40C-204ENST00000538492 PAQR9Q6ZVX9 377 aa25.7■■□□□ 1.71
RAB40C-204ENST00000538492 PDCD7Q8N8D1 485 aaKnown RBP25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms