RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 ZNF883P0CG24 379 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 CHRM1P11229 460 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-203ENST00000537194 NR2F2P24468 414 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 MAOBP27338 520 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 GTF2H1P32780 548 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 PSMC2P35998 433 aaKnown RBP9.37□□□□□ -0.91
SMAD3-203ENST00000537194 ASPAP45381 313 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 MFAP3P55082 362 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 YWHAEP62258 255 aaKnown RBP9.37□□□□□ -0.91
SMAD3-203ENST00000537194 DLG4P78352 724 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 ENPEPQ07075 957 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 SFSWAPQ12872 951 aaKnown RBP9.37□□□□□ -0.91
SMAD3-203ENST00000537194 COL9A2Q14055 689 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-203ENST00000537194 INAVAQ3KP66 663 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 FUT11Q495W5 492 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 FNDC3BQ53EP0 1204 aaKnown RBP9.37□□□□□ -0.91
SMAD3-203ENST00000537194 DCAF12L1Q5VU92 463 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 SPOPLQ6IQ16 392 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 Q6ZNB5 142 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 RAB44Q7Z6P3 723 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-203ENST00000537194 DENND1CQ8IV53 801 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 CCDC117Q8IWD4 279 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-203ENST00000537194 FAM186BQ8IYM0 893 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 GRAMD1CQ8IYS0 662 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 ZCCHC9Q8N567 271 aaKnown RBP9.37□□□□□ -0.91
SMAD3-203ENST00000537194 ZNF557Q8N988 423 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-203ENST00000537194 OR2I1PQ8NGU4 316 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 PLEKHO2Q8TD55 490 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 ADAMTS14Q8WXS8 1223 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 DNASE2BQ8WZ79 361 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 WBP2Q969T9 261 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 ELMO3Q96BJ8 720 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 PLD4Q96BZ4 506 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 FAXDC2Q96IV6 333 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 TMEM121BQ9BXQ6 578 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-203ENST00000537194 GZF1Q9H116 711 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-203ENST00000537194 KCTD10Q9H3F6 313 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 GAREM1Q9H706 876 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 FBRSQ9HAH7 460 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 ITM2CQ9NQX7 267 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 ELOVL2Q9NXB9 296 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 WSB2Q9NYS7 404 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-203ENST00000537194 HESX1Q9UBX0 185 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 HMGXB4Q9UGU5 601 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 NUMA1Q14980 2115 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 FRYQ5TBA9 3013 aa9.37□□□□□ -0.91
SMAD3-203ENST00000537194 ASXL3Q9C0F0 2248 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 CKAP5Q14008 2032 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 SLC12A8A0AV02 714 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 TYW5A2RUC4 315 aaKnown RBP9.36□□□□□ -0.91
SMAD3-203ENST00000537194 FAM221BA6H8Z2 402 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 METTL12A8MUP2 240 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 HHLA1C9JL84 531 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 FLRT2O43155 660 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 GREM1O60565 184 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 CILPO75339 1184 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 PENKP01210 267 aaPredicted RBP9.36□□□□□ -0.91
SMAD3-203ENST00000537194 SYKP43405 635 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 GCLMP48507 274 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 TPMTP51580 245 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 AFF3P51826 1226 aaKnown RBP9.36□□□□□ -0.91
SMAD3-203ENST00000537194 YWHAGP61981 247 aaKnown RBP eCLIP9.36□□□□□ -0.91
SMAD3-203ENST00000537194 RING1Q06587 406 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 SCAPQ12770 1279 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 ADAM9Q13443 819 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 ACAP1Q15027 740 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 TTC31Q49AM3 519 aaPredicted RBP9.36□□□□□ -0.91
SMAD3-203ENST00000537194 MPPE1Q53F39 396 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 ZNF394Q53GI3 561 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 PPP1R26Q5T8A7 1209 aaPredicted RBP9.36□□□□□ -0.91
SMAD3-203ENST00000537194 KRT39Q6A163 491 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 GPRIN1Q7Z2K8 1008 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 ADAT2Q7Z6V5 191 aaKnown RBP9.36□□□□□ -0.91
SMAD3-203ENST00000537194 GALNT15Q8N3T1 639 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 CPXM2Q8N436 756 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 KIAA0895Q8NCT3 520 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 RHBDD1Q8TEB9 315 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 WFIKKN2Q8TEU8 576 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 GOLGA1Q92805 767 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 SKA1Q96BD8 255 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 IPO9Q96P70 1041 aaKnown RBP9.36□□□□□ -0.91
SMAD3-203ENST00000537194 UBXN6Q9BZV1 441 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 SLC6A17Q9H1V8 727 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 LHX5Q9H2C1 402 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 NMUR1Q9HB89 426 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 LRRC4Q9HBW1 653 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 TMEM8AQ9HCN3 771 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 TM7SF3Q9NS93 570 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 OSER1Q9NX31 292 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 USP36Q9P275 1121 aaKnown RBP9.36□□□□□ -0.91
SMAD3-203ENST00000537194 EIF2B4Q9UI10 523 aaKnown RBP9.36□□□□□ -0.91
SMAD3-203ENST00000537194 FBXO10Q9UK96 956 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 TRAF3IP3Q9Y228 551 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 APC2O95996 2303 aa9.36□□□□□ -0.91
SMAD3-203ENST00000537194 KLRC4O43908 158 aa9.35□□□□□ -0.91
SMAD3-203ENST00000537194 DNTTP04053 509 aa9.35□□□□□ -0.91
SMAD3-203ENST00000537194 ATP5BP06576 529 aaKnown RBP9.35□□□□□ -0.91
SMAD3-203ENST00000537194 EPB41P11171 864 aaKnown RBP9.35□□□□□ -0.91
SMAD3-203ENST00000537194 CMA1P23946 247 aa9.35□□□□□ -0.91
SMAD3-203ENST00000537194 IL12RB1P42701 662 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms