RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 KIAA1522Q9P206 1035 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-204ENST00000537068 USP36Q9P275 1121 aaKnown RBP5.54□□□□□ -1.52
SNHG1-204ENST00000537068 KLK13Q9UKR3 277 aa5.54□□□□□ -1.52
SNHG1-204ENST00000537068 SLC27A6Q9Y2P4 619 aa5.54□□□□□ -1.52
SNHG1-204ENST00000537068 SH3BP1Q9Y3L3 701 aa5.54□□□□□ -1.52
SNHG1-204ENST00000537068 ATXN2Q99700 1313 aaKnown RBP5.53□□□□□ -1.52
SNHG1-204ENST00000537068 SPAARA0A1B0GVQ0 90 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 LRRIQ3A6PVS8 624 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-204ENST00000537068 WASH3PC4AMC7 463 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 MAPK13O15264 365 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 STX6O43752 255 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 KLRC4O43908 158 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 TLR5O60602 858 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 OPHN1O60890 802 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 CBFA2T3O75081 653 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 YEATS4O95619 227 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 TBX18O95935 607 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 ASS1P00966 412 aaKnown RBP5.53□□□□□ -1.52
SNHG1-204ENST00000537068 PENKP01210 267 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-204ENST00000537068 IGLV3-19P01714 112 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 RPN1P04843 607 aaKnown RBP5.53□□□□□ -1.52
SNHG1-204ENST00000537068 SYPP08247 313 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 ZNF883P0CG24 379 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 HOXB2P14652 356 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 TYRP14679 529 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 CASP1P29466 404 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 PLA2G4AP47712 749 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 CASP4P49662 377 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 NDST1P52848 882 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 ASIC1P78348 528 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 DLG4P78352 724 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 SIM1P81133 766 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-204ENST00000537068 RING1Q06587 406 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 INCA1Q0VD86 236 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 IFRD2Q12894 506 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-204ENST00000537068 TRPC3Q13507 836 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 OCLNQ16625 522 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 ZNF423Q2M1K9 1284 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 ANO4Q32M45 955 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 ZACNQ401N2 412 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 ZNF667Q5HYK9 610 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 C1orf220Q5T0J3 134 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 EGFLAMQ63HQ2 1017 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 CLEC20AQ6ZU45 233 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 TOGARAM2Q6ZUX3 1019 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 ARMCX6Q7L4S7 300 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 ACOT1Q86TX2 421 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 TTC30AQ86WT1 665 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 PROSER1Q86XN7 944 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 NELFCDQ8IXH7 590 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 PGBD3Q8N328 593 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 MINDY1Q8N5J2 469 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 CADM4Q8NFZ8 388 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 C1orf216Q8TAB5 229 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 BAHD1Q8TBE0 780 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-204ENST00000537068 ADAMTS14Q8WXS8 1223 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 XPO6Q96QU8 1125 aaKnown RBP5.53□□□□□ -1.52
SNHG1-204ENST00000537068 BACH2Q9BYV9 841 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 KCTD10Q9H3F6 313 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 FAM124BQ9H5Z6 455 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-204ENST00000537068 SMYD3Q9H7B4 428 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 UPF2Q9HAU5 1272 aaKnown RBP5.53□□□□□ -1.52
SNHG1-204ENST00000537068 SLC39A2Q9NP94 309 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 CD93Q9NPY3 652 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 FSCN3Q9NQT6 498 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 ITM2CQ9NQX7 267 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.53□□□□□ -1.52
SNHG1-204ENST00000537068 GMIPQ9P107 970 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 BCCIPQ9P287 314 aaKnown RBP eCLIP5.53□□□□□ -1.52
SNHG1-204ENST00000537068 WDR35Q9P2L0 1181 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 NXF1Q9UBU9 619 aaKnown RBP5.53□□□□□ -1.52
SNHG1-204ENST00000537068 SCML2Q9UQR0 700 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 USP3Q9Y6I4 520 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 DMXL2Q8TDJ6 3036 aa5.53□□□□□ -1.52
SNHG1-204ENST00000537068 NYNRINQ9P2P1 1898 aaKnown RBP5.53□□□□□ -1.52
SNHG1-204ENST00000537068 COL5A1P20908 1838 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-204ENST00000537068 ATP8B3O60423 1300 aa5.52□□□□□ -1.53
SNHG1-204ENST00000537068 PLXNA2O75051 1894 aa5.52□□□□□ -1.53
SNHG1-204ENST00000537068 FAM208BQ5VWN6 2430 aa5.52□□□□□ -1.53
SNHG1-204ENST00000537068 METTL12A8MUP2 240 aa5.52□□□□□ -1.53
SNHG1-204ENST00000537068 KCNJ18B7U540 433 aa5.52□□□□□ -1.53
SNHG1-204ENST00000537068 NEDD8-MDP1E9PL57 170 aa5.52□□□□□ -1.53
SNHG1-204ENST00000537068 PDXKO00764 312 aa5.52□□□□□ -1.53
SNHG1-204ENST00000537068 NPC1O15118 1278 aa5.52□□□□□ -1.53
SNHG1-204ENST00000537068 POLR2DO15514 142 aaKnown RBP5.52□□□□□ -1.53
SNHG1-204ENST00000537068 EXOC3O60645 756 aa5.52□□□□□ -1.53
SNHG1-204ENST00000537068 STC2O76061 302 aa5.52□□□□□ -1.53
SNHG1-204ENST00000537068 KLKB1P03952 638 aa5.52□□□□□ -1.53
SNHG1-204ENST00000537068 CFIP05156 583 aa5.52□□□□□ -1.53
SNHG1-204ENST00000537068 CCDC130P13994 396 aa5.52□□□□□ -1.53
SNHG1-204ENST00000537068 RDXP35241 583 aaKnown RBP5.52□□□□□ -1.53
SNHG1-204ENST00000537068 ASPAP45381 313 aa5.52□□□□□ -1.53
SNHG1-204ENST00000537068 MAPK8P45983 427 aa5.52□□□□□ -1.53
SNHG1-204ENST00000537068 DGKGP49619 791 aa5.52□□□□□ -1.53
SNHG1-204ENST00000537068 CYP2J2P51589 502 aa5.52□□□□□ -1.53
SNHG1-204ENST00000537068 KIF11P52732 1056 aa5.52□□□□□ -1.53
SNHG1-204ENST00000537068 COPAP53621 1224 aa5.52□□□□□ -1.53
SNHG1-204ENST00000537068 MAP3K7CLP57077 242 aa5.52□□□□□ -1.53
SNHG1-204ENST00000537068 ENPEPQ07075 957 aa5.52□□□□□ -1.53
SNHG1-204ENST00000537068 STK4Q13043 487 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms