RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-206	ENST00000536429	FAM217A	Q8IXS0	508 aa		13.73	□□□□□ -0.21
PRKDC-206	ENST00000536429	ALLC	Q8N6M5	410 aa		13.73	□□□□□ -0.21
PRKDC-206	ENST00000536429	TERB1	Q8NA31	727 aa		13.73	□□□□□ -0.21
PRKDC-206	ENST00000536429	SLC20A1	Q8WUM9	679 aa		13.73	□□□□□ -0.21
PRKDC-206	ENST00000536429	ATRIP	Q8WXE1	791 aa		13.73	□□□□□ -0.21
PRKDC-206	ENST00000536429	WDR35	Q9P2L0	1181 aa		13.73	□□□□□ -0.21
PRKDC-206	ENST00000536429	DEC1	Q9P2X7	70 aa		13.73	□□□□□ -0.21
PRKDC-206	ENST00000536429	ZNF510	Q9Y2H8	683 aa		13.73	□□□□□ -0.21
PRKDC-206	ENST00000536429	GVINP1	Q7Z2Y8	2422 aa		13.73	□□□□□ -0.21
PRKDC-206	ENST00000536429	OTOGL	Q3ZCN5	2332 aa		13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	GOLGA6L7	A0A1B0GV03	622 aa		13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	TBC1D3B	A6NDS4	549 aa		13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	PRRT4	C9JH25	899 aa		13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	GFRA2	O00451	464 aa		13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	HR	O43593	1189 aa		13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	ATG13	O75143	517 aa		13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	GRAP2	O75791	330 aa		13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	MME	P08473	750 aa		13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	ZNF165	P49910	485 aa		13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	SGSH	P51688	502 aa		13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	TBX4	P57082	545 aa		13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	DMC1	Q14565	340 aa		13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	PPP2R5D	Q14738	602 aa		13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	GRAMD4	Q6IC98	578 aa		13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	OLFML1	Q6UWY5	402 aa		13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	SYT13	Q7L8C5	426 aa		13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	IL17RC	Q8NAC3	791 aa		13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	SUMF1	Q8NBK3	374 aa		13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	ANKRD20A12P	Q8NF67	263 aa		13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	EPS8L1	Q8TE68	723 aa		13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	GOLGA1	Q92805	767 aa		13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	MYEOV	Q96EZ4	313 aa		13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	FCRL2	Q96LA5	508 aa	Predicted RBP	13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	NAT10	Q9H0A0	1025 aa	Known RBP	13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	NOCT	Q9UK39	431 aa	Known RBP	13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	SLC8A2	Q9UPR5	921 aa		13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	FAM186A	A6NE01	2351 aa		13.72	□□□□□ -0.21
PRKDC-206	ENST00000536429	SGK1	O00141	431 aa		13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	SART1	O43290	800 aa	Known RBP	13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	ADAM23	O75077	832 aa		13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	KLF8	O95600	359 aa	Predicted RBP	13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	LMNA	P02545	664 aa	Known RBP	13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	CHRNB2	P17787	502 aa		13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	HOXA6	P31267	233 aa		13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	CDH5	P33151	784 aa	Predicted RBP	13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	SOX5	P35711	763 aa		13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	TNFRSF4	P43489	277 aa		13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	HARS2	P49590	506 aa	Known RBP	13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	BPIFB4	P59827	614 aa		13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	LPAL2	Q16609	132 aa		13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	C2CD6	Q53TS8	623 aa		13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	FAM133B	Q5BKY9	247 aa	Known RBP	13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	C10orf76	Q5T2E6	689 aa		13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	SMYD5	Q6GMV2	418 aa		13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	NADSYN1	Q6IA69	706 aa		13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	OR6B2	Q6IFH4	312 aa		13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	RFWD3	Q6PCD5	774 aa		13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	TMEM92	Q6UXU6	159 aa		13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	LONP2	Q86WA8	852 aa		13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	CPXM2	Q8N436	756 aa		13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	TXNDC5	Q8NBS9	432 aa	Known RBP	13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	ACD	Q96AP0	544 aa		13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	SLC39A13	Q96H72	371 aa		13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	SLC2A13	Q96QE2	648 aa		13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	XPO6	Q96QU8	1125 aa	Known RBP	13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	ERGIC2	Q96RQ1	377 aa		13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	POPDC2	Q9HBU9	364 aa		13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	XPO7	Q9UIA9	1087 aa	Known RBP	13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	STOML2	Q9UJZ1	356 aa		13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	FBXO10	Q9UK96	956 aa		13.71	□□□□□ -0.21
PRKDC-206	ENST00000536429	CAPN9	O14815	690 aa		13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	IGLV3-25	P01717	112 aa		13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	HOXD9	P28356	352 aa	Predicted RBP	13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	SLC6A4	P31645	630 aa		13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	CHKA	P35790	457 aa		13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	WAS	P42768	502 aa		13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	DGKG	P49619	791 aa		13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	NRL	P54845	237 aa		13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	YWHAZ	P63104	245 aa	Known RBP	13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	MRPS21	P82921	87 aa	Known RBP	13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	GEN1	Q17RS7	908 aa		13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	EGFLAM	Q63HQ2	1017 aa		13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	BEND5	Q7L4P6	421 aa		13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	LUZP1	Q86V48	1076 aa		13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	WDR5B	Q86VZ2	330 aa		13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	DEFB106A	Q8N104	65 aa		13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	DCLK2	Q8N568	766 aa		13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	TMEM35B	Q8NCS4	154 aa		13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	NEK11	Q8NG66	645 aa		13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	ERLEC1	Q96DZ1	483 aa		13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	SERPINB11	Q96P15	392 aa		13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	ACOX2	Q99424	681 aa		13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	ADAM33	Q9BZ11	813 aa		13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	EPC1	Q9H2F5	836 aa		13.7	□□□□□ -0.22
PRKDC-206	ENST00000536429	PDCL3	Q9H2J4	239 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms