RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 PLEKHA7Q6IQ23 1121 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 TRIM67Q6ZTA4 783 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 DENND1CQ8IV53 801 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 CSGALNACT1Q8TDX6 532 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 RXFP2Q8WXD0 754 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 ATP2A3Q93084 1043 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 ZNF653Q96CK0 615 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 FCRL2Q96LA5 508 aaPredicted RBP12.56□□□□□ -0.4
CHD4-203ENST00000535717 CCDC42Q96M95 316 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 TBCBQ99426 244 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 SELENOOQ9BVL4 669 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 DCLK3Q9C098 648 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 DEF6Q9H4E7 631 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 EPHX3Q9H6B9 360 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 HEBP1Q9NRV9 189 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 SPTLC3Q9NUV7 552 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 DDIT4Q9NX09 232 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 RRN3Q9NYV6 651 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 FBXL21Q9UKT6 434 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 AGO1Q9UL18 857 aaKnown RBP12.56□□□□□ -0.4
CHD4-203ENST00000535717 CA14Q9ULX7 337 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 TECTAO75443 2155 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 SYNJ2BP-COX16A0A087WUM0 186 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 KRBA1A5PL33 1030 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 M0QYT0 321 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 NFATC1O95644 943 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 CYP17A1P05093 508 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 MYBL1P10243 752 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 PDGFRAP16234 1089 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 ABCB4P21439 1286 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 FECHP22830 423 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 GBP1P32455 592 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 SOX9P48436 509 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 HARS2P49590 506 aaKnown RBP12.55□□□□□ -0.4
CHD4-203ENST00000535717 SULT1E1P49888 294 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 NME3Q13232 169 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 CCDC14Q49A88 953 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 ZC3H12AQ5D1E8 599 aaKnown RBP12.55□□□□□ -0.4
CHD4-203ENST00000535717 RHBDF2Q6PJF5 856 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 SIX5Q8N196 739 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 CPA6Q8N4T0 437 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 OTUB2Q96DC9 234 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 TRIM11Q96F44 468 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 CFAP57Q96MR6 1250 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 MCEEQ96PE7 176 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 THAP2Q9H0W7 228 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 ECT2Q9H8V3 914 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 ARHGEF3Q9NR81 526 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 PIGVQ9NUD9 493 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 PARVAQ9NVD7 372 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 COX16Q9P0S2 106 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 MYO1AQ9UBC5 1043 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 CNOT8Q9UFF9 292 aaKnown RBP12.55□□□□□ -0.4
CHD4-203ENST00000535717 STAP1Q9ULZ2 295 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 ZNF510Q9Y2H8 683 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 PIAS3Q9Y6X2 628 aa12.55□□□□□ -0.4
CHD4-203ENST00000535717 COL4A3Q01955 1670 aa12.54□□□□□ -0.4
CHD4-203ENST00000535717 F5P12259 2224 aa12.54□□□□□ -0.4
CHD4-203ENST00000535717 SHISA7A6NL88 538 aa12.54□□□□□ -0.4
CHD4-203ENST00000535717 RRP9O43818 475 aaKnown RBP12.54□□□□□ -0.4
CHD4-203ENST00000535717 GPD1P21695 349 aa12.54□□□□□ -0.4
CHD4-203ENST00000535717 PTPN9P43378 593 aa12.54□□□□□ -0.4
CHD4-203ENST00000535717 CXCR3P49682 368 aa12.54□□□□□ -0.4
CHD4-203ENST00000535717 GALCP54803 685 aa12.54□□□□□ -0.4
CHD4-203ENST00000535717 ATP11AP98196 1134 aa12.54□□□□□ -0.4
CHD4-203ENST00000535717 DHCR24Q15392 516 aa12.54□□□□□ -0.4
CHD4-203ENST00000535717 MLF2Q15773 248 aaPredicted RBP12.54□□□□□ -0.4
CHD4-203ENST00000535717 C15orf59Q2T9L4 293 aaPredicted RBP12.54□□□□□ -0.4
CHD4-203ENST00000535717 RAB6CQ53S08 254 aa12.54□□□□□ -0.4
CHD4-203ENST00000535717 LY6G5CQ5SRR4 150 aa12.54□□□□□ -0.4
CHD4-203ENST00000535717 SH3PXD2AQ5TCZ1 1133 aa12.54□□□□□ -0.4
CHD4-203ENST00000535717 NUGGCQ68CJ6 796 aa12.54□□□□□ -0.4
CHD4-203ENST00000535717 DCUN1D2Q6PH85 259 aa12.54□□□□□ -0.4
CHD4-203ENST00000535717 BNIPLQ7Z465 357 aa12.54□□□□□ -0.4
CHD4-203ENST00000535717 TMEM25Q86YD3 366 aa12.54□□□□□ -0.4
CHD4-203ENST00000535717 UNC45BQ8IWX7 931 aa12.54□□□□□ -0.4
CHD4-203ENST00000535717 FAM217AQ8IXS0 508 aa12.54□□□□□ -0.4
CHD4-203ENST00000535717 AZIN2Q96A70 460 aa12.54□□□□□ -0.4
CHD4-203ENST00000535717 CHFRQ96EP1 664 aa12.54□□□□□ -0.4
CHD4-203ENST00000535717 PGAP3Q96FM1 320 aaPredicted RBP12.54□□□□□ -0.4
CHD4-203ENST00000535717 PACSIN1Q9BY11 444 aa12.54□□□□□ -0.4
CHD4-203ENST00000535717 RAB6CQ9H0N0 254 aa12.54□□□□□ -0.4
CHD4-203ENST00000535717 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.54□□□□□ -0.4
CHD4-203ENST00000535717 STOML2Q9UJZ1 356 aa12.54□□□□□ -0.4
CHD4-203ENST00000535717 GOLGA6L7A0A1B0GV03 622 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 ANKRD62A6NC57 917 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 TMEM191CA6NGB0 347 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 TMEM221A6NGB7 291 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 KCNU1A8MYU2 1149 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 SPECC1L-ADORA2AF8WAN1 911 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 M0R296 226 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 DLL1O00548 723 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 ACSL4O60488 711 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 ENDOD1O94919 500 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 LATS1O95835 1130 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 MOCS2O96007 188 aaPredicted RBP12.53□□□□□ -0.4
CHD4-203ENST00000535717 F9P00740 461 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 APOEP02649 317 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 CYP1A2P05177 515 aa12.53□□□□□ -0.4
CHD4-203ENST00000535717 GLULP15104 373 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms