RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 SV2AQ7L0J3 742 aa13.68□□□□□ -0.22
COPB1-209ENST00000533096 RSRC2Q7L4I2 434 aaKnown RBP13.68□□□□□ -0.22
COPB1-209ENST00000533096 TADA2BQ86TJ2 420 aa13.68□□□□□ -0.22
COPB1-209ENST00000533096 GALNT15Q8N3T1 639 aa13.68□□□□□ -0.22
COPB1-209ENST00000533096 LINC00301Q8NCQ3 95 aa13.68□□□□□ -0.22
COPB1-209ENST00000533096 GANCQ8TET4 914 aa13.68□□□□□ -0.22
COPB1-209ENST00000533096 CYB5D2Q8WUJ1 264 aa13.68□□□□□ -0.22
COPB1-209ENST00000533096 HEXIM2Q96MH2 286 aaKnown RBP13.68□□□□□ -0.22
COPB1-209ENST00000533096 NT5C1AQ9BXI3 368 aa13.68□□□□□ -0.22
COPB1-209ENST00000533096 AGO1Q9UL18 857 aaKnown RBP13.68□□□□□ -0.22
COPB1-209ENST00000533096 PLA2G4CQ9UP65 541 aa13.68□□□□□ -0.22
COPB1-209ENST00000533096 MTMR6Q9Y217 621 aa13.68□□□□□ -0.22
COPB1-209ENST00000533096 CACNA1EQ15878 2313 aa13.68□□□□□ -0.22
COPB1-209ENST00000533096 FAM47DPA6NHR8 397 aa13.67□□□□□ -0.22
COPB1-209ENST00000533096 TNFSF14O43557 240 aa13.67□□□□□ -0.22
COPB1-209ENST00000533096 PENKP01210 267 aaPredicted RBP13.67□□□□□ -0.22
COPB1-209ENST00000533096 ZNF883P0CG24 379 aa13.67□□□□□ -0.22
COPB1-209ENST00000533096 PIK3CAP42336 1068 aa13.67□□□□□ -0.22
COPB1-209ENST00000533096 KIF11P52732 1056 aa13.67□□□□□ -0.22
COPB1-209ENST00000533096 ZNF132P52740 706 aa13.67□□□□□ -0.22
COPB1-209ENST00000533096 FNDC3BQ53EP0 1204 aaKnown RBP13.67□□□□□ -0.22
COPB1-209ENST00000533096 KLHDC10Q6PID8 442 aa13.67□□□□□ -0.22
COPB1-209ENST00000533096 SHC4Q6S5L8 630 aa13.67□□□□□ -0.22
COPB1-209ENST00000533096 DBX2Q6ZNG2 339 aa13.67□□□□□ -0.22
COPB1-209ENST00000533096 ANKS1BQ7Z6G8 1248 aa13.67□□□□□ -0.22
COPB1-209ENST00000533096 ADAT2Q7Z6V5 191 aaKnown RBP13.67□□□□□ -0.22
COPB1-209ENST00000533096 GRAMD1CQ8IYS0 662 aa13.67□□□□□ -0.22
COPB1-209ENST00000533096 PIP4K2CQ8TBX8 421 aa13.67□□□□□ -0.22
COPB1-209ENST00000533096 PIWIL1Q96J94 861 aaKnown RBP13.67□□□□□ -0.22
COPB1-209ENST00000533096 ARID3AQ99856 593 aa13.67□□□□□ -0.22
COPB1-209ENST00000533096 DCLK3Q9C098 648 aa13.67□□□□□ -0.22
COPB1-209ENST00000533096 LHX5Q9H2C1 402 aa13.67□□□□□ -0.22
COPB1-209ENST00000533096 ZSCAN16Q9H4T2 348 aaPredicted RBP13.67□□□□□ -0.22
COPB1-209ENST00000533096 MMRN2Q9H8L6 949 aa13.67□□□□□ -0.22
COPB1-209ENST00000533096 TM9SF3Q9HD45 589 aa13.67□□□□□ -0.22
COPB1-209ENST00000533096 CGNQ9P2M7 1197 aaKnown RBP13.67□□□□□ -0.22
COPB1-209ENST00000533096 NFE2L3Q9Y4A8 694 aa13.67□□□□□ -0.22
COPB1-209ENST00000533096 PCDHGB2Q9Y5G2 931 aa13.67□□□□□ -0.22
COPB1-209ENST00000533096 PCDHA5Q9Y5H7 936 aa13.67□□□□□ -0.22
COPB1-209ENST00000533096 PKD1L2Q7Z442 2459 aa13.66□□□□□ -0.22
COPB1-209ENST00000533096 H0Y8X5 98 aa13.66□□□□□ -0.22
COPB1-209ENST00000533096 NPC1O15118 1278 aa13.66□□□□□ -0.22
COPB1-209ENST00000533096 TIMM44O43615 452 aa13.66□□□□□ -0.22
COPB1-209ENST00000533096 HLA-DRAP01903 254 aa13.66□□□□□ -0.22
COPB1-209ENST00000533096 JUPP14923 745 aa13.66□□□□□ -0.22
COPB1-209ENST00000533096 ASPAP45381 313 aa13.66□□□□□ -0.22
COPB1-209ENST00000533096 NASPP49321 788 aaPredicted RBP13.66□□□□□ -0.22
COPB1-209ENST00000533096 PSEN1P49768 467 aa13.66□□□□□ -0.22
COPB1-209ENST00000533096 CLDN6P56747 220 aa13.66□□□□□ -0.22
COPB1-209ENST00000533096 KCNT1Q5JUK3 1230 aa13.66□□□□□ -0.22
COPB1-209ENST00000533096 TMEM215Q68D42 235 aa13.66□□□□□ -0.22
COPB1-209ENST00000533096 C12orf56Q8IXR9 622 aa13.66□□□□□ -0.22
COPB1-209ENST00000533096 PDCD7Q8N8D1 485 aaKnown RBP13.66□□□□□ -0.22
COPB1-209ENST00000533096 OR2T3Q8NH03 318 aa13.66□□□□□ -0.22
COPB1-209ENST00000533096 C1orf216Q8TAB5 229 aa13.66□□□□□ -0.22
COPB1-209ENST00000533096 GOLGA5Q8TBA6 731 aa13.66□□□□□ -0.22
COPB1-209ENST00000533096 NDRG1Q92597 394 aaKnown RBP13.66□□□□□ -0.22
COPB1-209ENST00000533096 ZNF396Q96N95 335 aaPredicted RBP13.66□□□□□ -0.22
COPB1-209ENST00000533096 DUSP16Q9BY84 665 aa13.66□□□□□ -0.22
COPB1-209ENST00000533096 SCUBE2Q9NQ36 999 aa13.66□□□□□ -0.22
COPB1-209ENST00000533096 MARCH2Q9P0N8 246 aa13.66□□□□□ -0.22
COPB1-209ENST00000533096 STRIP2Q9ULQ0 834 aa13.66□□□□□ -0.22
COPB1-209ENST00000533096 ANAPC1Q9H1A4 1944 aa13.66□□□□□ -0.22
COPB1-209ENST00000533096 ADAMTS9Q9P2N4 1935 aa13.66□□□□□ -0.22
COPB1-209ENST00000533096 PCNX2A6NKB5 2137 aa13.66□□□□□ -0.22
COPB1-209ENST00000533096 UBE4BO95155 1302 aa13.65□□□□□ -0.22
COPB1-209ENST00000533096 MYO16Q9Y6X6 1858 aa13.65□□□□□ -0.22
COPB1-209ENST00000533096 PVALEFA0A1B0GWK0 134 aa13.65□□□□□ -0.22
COPB1-209ENST00000533096 PLK4O00444 970 aa13.65□□□□□ -0.22
COPB1-209ENST00000533096 CUTAO60888 179 aa13.65□□□□□ -0.22
COPB1-209ENST00000533096 PPP6R2O75170 966 aa13.65□□□□□ -0.22
COPB1-209ENST00000533096 ITPKBP27987 946 aa13.65□□□□□ -0.22
COPB1-209ENST00000533096 CLDN10P78369 228 aa13.65□□□□□ -0.22
COPB1-209ENST00000533096 SEMG2Q02383 582 aa13.65□□□□□ -0.22
COPB1-209ENST00000533096 C19orf57Q0VDD7 668 aa13.65□□□□□ -0.22
COPB1-209ENST00000533096 STK4Q13043 487 aa13.65□□□□□ -0.22
COPB1-209ENST00000533096 ENPP2Q13822 863 aa13.65□□□□□ -0.22
COPB1-209ENST00000533096 ZACNQ401N2 412 aa13.65□□□□□ -0.22
COPB1-209ENST00000533096 PPP1R26Q5T8A7 1209 aaPredicted RBP13.65□□□□□ -0.22
COPB1-209ENST00000533096 CCDC186Q7Z3E2 898 aa13.65□□□□□ -0.22
COPB1-209ENST00000533096 GATAD2AQ86YP4 633 aa13.65□□□□□ -0.22
COPB1-209ENST00000533096 BAHD1Q8TBE0 780 aaPredicted RBP13.65□□□□□ -0.22
COPB1-209ENST00000533096 TAF4BQ92750 862 aa13.65□□□□□ -0.22
COPB1-209ENST00000533096 BIRC7Q96CA5 298 aa13.65□□□□□ -0.22
COPB1-209ENST00000533096 BTBD1Q9H0C5 482 aa13.65□□□□□ -0.22
COPB1-209ENST00000533096 MTG2Q9H4K7 406 aa13.65□□□□□ -0.22
COPB1-209ENST00000533096 DMAC2Q9NW81 257 aa13.65□□□□□ -0.22
COPB1-209ENST00000533096 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.65□□□□□ -0.22
COPB1-209ENST00000533096 AK5Q9Y6K8 562 aa13.65□□□□□ -0.22
COPB1-209ENST00000533096 SEMA4FO95754 770 aa13.64□□□□□ -0.23
COPB1-209ENST00000533096 ASS1P00966 412 aaKnown RBP13.64□□□□□ -0.23
COPB1-209ENST00000533096 DNTTP04053 509 aa13.64□□□□□ -0.23
COPB1-209ENST00000533096 NR3C1P04150 777 aa13.64□□□□□ -0.23
COPB1-209ENST00000533096 PDIA4P13667 645 aaKnown RBP13.64□□□□□ -0.23
COPB1-209ENST00000533096 GRK6P43250 576 aa13.64□□□□□ -0.23
COPB1-209ENST00000533096 GCLMP48507 274 aa13.64□□□□□ -0.23
COPB1-209ENST00000533096 C21orf59P57076 290 aa13.64□□□□□ -0.23
COPB1-209ENST00000533096 YWHAGP61981 247 aaKnown RBP eCLIP13.64□□□□□ -0.23
COPB1-209ENST00000533096 EHHADHQ08426 723 aa13.64□□□□□ -0.23
COPB1-209ENST00000533096 CAMK2BQ13554 666 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms