RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 FUCA2Q9BTY2 467 aa16.03■□□□□ 0.16
CPSF1-210ENST00000532935 TRIM62Q9BVG3 475 aa16.03■□□□□ 0.16
CPSF1-210ENST00000532935 PLK2Q9NYY3 685 aa16.03■□□□□ 0.16
CPSF1-210ENST00000532935 NAALADL1Q9UQQ1 740 aa16.03■□□□□ 0.16
CPSF1-210ENST00000532935 CEP83Q9Y592 693 aa16.03■□□□□ 0.16
CPSF1-210ENST00000532935 OTOGLQ3ZCN5 2332 aa16.02■□□□□ 0.16
CPSF1-210ENST00000532935 SMTNL1A8MU46 457 aa16.02■□□□□ 0.16
CPSF1-210ENST00000532935 EPHB6O15197 1021 aa16.02■□□□□ 0.16
CPSF1-210ENST00000532935 LATS1O95835 1130 aa16.02■□□□□ 0.16
CPSF1-210ENST00000532935 PENKP01210 267 aaPredicted RBP16.02■□□□□ 0.16
CPSF1-210ENST00000532935 IGLV3-27P01718 113 aa16.02■□□□□ 0.16
CPSF1-210ENST00000532935 CHRM1P11229 460 aaPredicted RBP16.02■□□□□ 0.16
CPSF1-210ENST00000532935 ATP1A3P13637 1013 aa16.02■□□□□ 0.16
CPSF1-210ENST00000532935 TIE1P35590 1138 aa16.02■□□□□ 0.16
CPSF1-210ENST00000532935 KIR2DL1P43626 348 aaPredicted RBP16.02■□□□□ 0.16
CPSF1-210ENST00000532935 UBXN1Q04323 297 aa16.02■□□□□ 0.16
CPSF1-210ENST00000532935 DMC1Q14565 340 aa16.02■□□□□ 0.16
CPSF1-210ENST00000532935 FYB2Q5VWT5 728 aa16.02■□□□□ 0.16
CPSF1-210ENST00000532935 NUDT18Q6ZVK8 323 aa16.02■□□□□ 0.16
CPSF1-210ENST00000532935 WDR5BQ86VZ2 330 aa16.02■□□□□ 0.16
CPSF1-210ENST00000532935 LONP2Q86WA8 852 aa16.02■□□□□ 0.16
CPSF1-210ENST00000532935 CAMKK1Q8N5S9 505 aa16.02■□□□□ 0.16
CPSF1-210ENST00000532935 HHIPQ96QV1 700 aa16.02■□□□□ 0.16
CPSF1-210ENST00000532935 EPC1Q9H2F5 836 aa16.02■□□□□ 0.16
CPSF1-210ENST00000532935 PDCL3Q9H2J4 239 aa16.02■□□□□ 0.16
CPSF1-210ENST00000532935 POPDC2Q9HBU9 364 aa16.02■□□□□ 0.16
CPSF1-210ENST00000532935 NLRC4Q9NPP4 1024 aa16.02■□□□□ 0.16
CPSF1-210ENST00000532935 DAAM1Q9Y4D1 1078 aa16.02■□□□□ 0.16
CPSF1-210ENST00000532935 SYCE3A1L190 88 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 CAPN9O14815 690 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 CYBBP04839 570 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 CISD3P0C7P0 127 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 PXNP49023 591 aaPredicted RBP16.01■□□□□ 0.15
CPSF1-210ENST00000532935 DGKGP49619 791 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 ZNF165P49910 485 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 TBX4P57082 545 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 JAM2P57087 298 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 SNX16P57768 344 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 YWHAZP63104 245 aaKnown RBP16.01■□□□□ 0.15
CPSF1-210ENST00000532935 RING1Q06587 406 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 NNTQ13423 1086 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 TAF5Q15542 800 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 PTPN20Q4JDL3 420 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 C10orf76Q5T2E6 689 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 EMC10Q5UCC4 262 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 TAF3Q5VWG9 929 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 SYPL2Q5VXT5 272 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 NUGGCQ68CJ6 796 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 NOP9Q86U38 636 aaKnown RBP16.01■□□□□ 0.15
CPSF1-210ENST00000532935 TAC4Q86UU9 113 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 UNC45BQ8IWX7 931 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 CCDC33Q8N5R6 958 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 ALLCQ8N6M5 410 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 IL17RCQ8NAC3 791 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 SUMF1Q8NBK3 374 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 TMEM35BQ8NCS4 154 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 ADAM32Q8TC27 787 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 DDX1Q92499 740 aaKnown RBP16.01■□□□□ 0.15
CPSF1-210ENST00000532935 PIWIL1Q96J94 861 aaKnown RBP16.01■□□□□ 0.15
CPSF1-210ENST00000532935 PCMTD1Q96MG8 357 aaPredicted RBP16.01■□□□□ 0.15
CPSF1-210ENST00000532935 SERPINB11Q96P15 392 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 ERGIC2Q96RQ1 377 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 STOML2Q9UJZ1 356 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 FBXO10Q9UK96 956 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 MMP17Q9ULZ9 603 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 EP300Q09472 2414 aaPredicted RBP16.01■□□□□ 0.15
CPSF1-210ENST00000532935 PTPRZ1P23471 2315 aaPredicted RBP16.01■□□□□ 0.15
CPSF1-210ENST00000532935 RALGAPA1Q6GYQ0 2036 aa16.01■□□□□ 0.15
CPSF1-210ENST00000532935 GFPT2O94808 682 aa16■□□□□ 0.15
CPSF1-210ENST00000532935 KLF8O95600 359 aaPredicted RBP16■□□□□ 0.15
CPSF1-210ENST00000532935 ERBB2P04626 1255 aa16■□□□□ 0.15
CPSF1-210ENST00000532935 GLI1P08151 1106 aa16■□□□□ 0.15
CPSF1-210ENST00000532935 CDH5P33151 784 aaPredicted RBP16■□□□□ 0.15
CPSF1-210ENST00000532935 HSF5Q4G112 596 aaPredicted RBP16■□□□□ 0.15
CPSF1-210ENST00000532935 EFHC1Q5JVL4 640 aa16■□□□□ 0.15
CPSF1-210ENST00000532935 ADGRF1Q5T601 910 aa16■□□□□ 0.15
CPSF1-210ENST00000532935 OR6B2Q6IFH4 312 aa16■□□□□ 0.15
CPSF1-210ENST00000532935 TOGARAM2Q6ZUX3 1019 aa16■□□□□ 0.15
CPSF1-210ENST00000532935 FAM183BPQ6ZVS7 135 aa16■□□□□ 0.15
CPSF1-210ENST00000532935 TXNDC5Q8NBS9 432 aaKnown RBP16■□□□□ 0.15
CPSF1-210ENST00000532935 NEK11Q8NG66 645 aa16■□□□□ 0.15
CPSF1-210ENST00000532935 KCNV2Q8TDN2 545 aa16■□□□□ 0.15
CPSF1-210ENST00000532935 EPS8L1Q8TE68 723 aa16■□□□□ 0.15
CPSF1-210ENST00000532935 IPO4Q8TEX9 1081 aaKnown RBP16■□□□□ 0.15
CPSF1-210ENST00000532935 DDI1Q8WTU0 396 aa16■□□□□ 0.15
CPSF1-210ENST00000532935 FCRL2Q96LA5 508 aaPredicted RBP16■□□□□ 0.15
CPSF1-210ENST00000532935 SPAG5Q96R06 1193 aa16■□□□□ 0.15
CPSF1-210ENST00000532935 SYNCQ9H7C4 482 aa16■□□□□ 0.15
CPSF1-210ENST00000532935 ASNSD1Q9NWL6 643 aa16■□□□□ 0.15
CPSF1-210ENST00000532935 SMG5Q9UPR3 1016 aaKnown RBP16■□□□□ 0.15
CPSF1-210ENST00000532935 TLR6Q9Y2C9 796 aa16■□□□□ 0.15
CPSF1-210ENST00000532935 STARD13Q9Y3M8 1113 aa16■□□□□ 0.15
CPSF1-210ENST00000532935 GVINP1Q7Z2Y8 2422 aa16■□□□□ 0.15
CPSF1-210ENST00000532935 GPR179Q6PRD1 2367 aa15.99■□□□□ 0.15
CPSF1-210ENST00000532935 CCDC163A0A0D9SF12 145 aa15.99■□□□□ 0.15
CPSF1-210ENST00000532935 PRRT4C9JH25 899 aa15.99■□□□□ 0.15
CPSF1-210ENST00000532935 GFRA2O00451 464 aa15.99■□□□□ 0.15
CPSF1-210ENST00000532935 HRO43593 1189 aa15.99■□□□□ 0.15
CPSF1-210ENST00000532935 TSPAN3O60637 253 aa15.99■□□□□ 0.15
CPSF1-210ENST00000532935 HSF2BPO75031 334 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms