RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 A0A087X0T9 212 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 TCRBV5S1A1TA0A578 114 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 IRAK2O43187 625 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 RTN2O75298 545 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 CYP17A1P05093 508 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 FAM228BP0C875 321 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 GLULP15104 373 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 CD72P21854 359 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 RRM1P23921 792 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 HARS2P49590 506 aaKnown RBP25.84■■□□□ 1.73
USP48-214ENST00000532737 STARD6P59095 220 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 RING1Q06587 406 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 NNTQ13423 1086 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 EIF4EBP2Q13542 120 aaPredicted RBP25.84■■□□□ 1.73
USP48-214ENST00000532737 OTUD1Q5VV17 481 aaPredicted RBP25.84■■□□□ 1.73
USP48-214ENST00000532737 ARCQ7LC44 396 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 VPS36Q86VN1 386 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 EMC1Q8N766 993 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 TC2NQ8N9U0 490 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 JOSD2Q8TAC2 188 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 CHFRQ96EP1 664 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 SHDQ96IW2 340 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 VCPIP1Q96JH7 1222 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 NPY6RQ99463 290 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 CHP1Q99653 195 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 DDX23Q9BUQ8 820 aaKnown RBP25.84■■□□□ 1.73
USP48-214ENST00000532737 ADAM33Q9BZ11 813 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 C8orf33Q9H7E9 229 aaPredicted RBP25.84■■□□□ 1.73
USP48-214ENST00000532737 FAM204AQ9H8W3 233 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 TLR6Q9Y2C9 796 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 ZNF510Q9Y2H8 683 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 TICRRQ7Z2Z1 1910 aa25.84■■□□□ 1.73
USP48-214ENST00000532737 F5P12259 2224 aa25.83■■□□□ 1.73
USP48-214ENST00000532737 SPECC1L-ADORA2AF8WAN1 911 aa25.83■■□□□ 1.73
USP48-214ENST00000532737 TFE3P19532 575 aaPredicted RBP25.83■■□□□ 1.73
USP48-214ENST00000532737 CTHP32929 405 aa25.83■■□□□ 1.73
USP48-214ENST00000532737 LY6G5CQ5SRR4 150 aa25.83■■□□□ 1.73
USP48-214ENST00000532737 TMEM25Q86YD3 366 aa25.83■■□□□ 1.73
USP48-214ENST00000532737 SUGP1Q8IWZ8 645 aaKnown RBP25.83■■□□□ 1.73
USP48-214ENST00000532737 C3orf20Q8ND61 904 aa25.83■■□□□ 1.73
USP48-214ENST00000532737 NT5C3BQ969T7 300 aa25.83■■□□□ 1.73
USP48-214ENST00000532737 PHOX2BQ99453 314 aa25.83■■□□□ 1.73
USP48-214ENST00000532737 ISCUQ9H1K1 167 aa25.83■■□□□ 1.73
USP48-214ENST00000532737 TBC1D17Q9HA65 648 aa25.83■■□□□ 1.73
USP48-214ENST00000532737 DDIT4Q9NX09 232 aa25.83■■□□□ 1.73
USP48-214ENST00000532737 KRT3P12035 628 aa25.82■■□□□ 1.72
USP48-214ENST00000532737 GJA4P35212 333 aa25.82■■□□□ 1.72
USP48-214ENST00000532737 NR1H3Q13133 447 aa25.82■■□□□ 1.72
USP48-214ENST00000532737 GAB4Q2WGN9 574 aa25.82■■□□□ 1.72
USP48-214ENST00000532737 ZC3H12AQ5D1E8 599 aaKnown RBP25.82■■□□□ 1.72
USP48-214ENST00000532737 TXNDC11Q6PKC3 985 aa25.82■■□□□ 1.72
USP48-214ENST00000532737 RALGPS2Q86X27 583 aaPredicted RBP25.82■■□□□ 1.72
USP48-214ENST00000532737 SELENOOQ9BVL4 669 aa25.82■■□□□ 1.72
USP48-214ENST00000532737 MFSD1Q9H3U5 465 aa25.82■■□□□ 1.72
USP48-214ENST00000532737 RRN3Q9NYV6 651 aa25.82■■□□□ 1.72
USP48-214ENST00000532737 CALCOCO1Q9P1Z2 691 aa25.82■■□□□ 1.72
USP48-214ENST00000532737 SYNJ2BP-COX16A0A087WUM0 186 aa25.81■■□□□ 1.72
USP48-214ENST00000532737 SIGLEC16A6NMB1 481 aa25.81■■□□□ 1.72
USP48-214ENST00000532737 M0QYT0 321 aa25.81■■□□□ 1.72
USP48-214ENST00000532737 RFC1P35251 1148 aaPredicted RBP25.81■■□□□ 1.72
USP48-214ENST00000532737 SULT1E1P49888 294 aa25.81■■□□□ 1.72
USP48-214ENST00000532737 NME3Q13232 169 aa25.81■■□□□ 1.72
USP48-214ENST00000532737 MAPK8IP2Q13387 824 aaPredicted RBP25.81■■□□□ 1.72
USP48-214ENST00000532737 ASTE1Q2TB18 679 aaPredicted RBP25.81■■□□□ 1.72
USP48-214ENST00000532737 SLC25A52Q3SY17 297 aa25.81■■□□□ 1.72
USP48-214ENST00000532737 NUGGCQ68CJ6 796 aa25.81■■□□□ 1.72
USP48-214ENST00000532737 DNAJC24Q6P3W2 148 aa25.81■■□□□ 1.72
USP48-214ENST00000532737 UNC45BQ8IWX7 931 aa25.81■■□□□ 1.72
USP48-214ENST00000532737 FLCNQ8NFG4 579 aa25.81■■□□□ 1.72
USP48-214ENST00000532737 RXFP2Q8WXD0 754 aa25.81■■□□□ 1.72
USP48-214ENST00000532737 TBCBQ99426 244 aa25.81■■□□□ 1.72
USP48-214ENST00000532737 FOXQ1Q9C009 403 aa25.81■■□□□ 1.72
USP48-214ENST00000532737 SPHK2Q9NRA0 654 aa25.81■■□□□ 1.72
USP48-214ENST00000532737 COX16Q9P0S2 106 aa25.81■■□□□ 1.72
USP48-214ENST00000532737 STAP1Q9ULZ2 295 aa25.81■■□□□ 1.72
USP48-214ENST00000532737 NENFQ9UMX5 172 aa25.81■■□□□ 1.72
USP48-214ENST00000532737 SSU72P8A0A1W2PR75 194 aa25.8■■□□□ 1.72
USP48-214ENST00000532737 KANSL1LA0AUZ9 987 aa25.8■■□□□ 1.72
USP48-214ENST00000532737 C2CD4BA6NLJ0 364 aa25.8■■□□□ 1.72
USP48-214ENST00000532737 STK25O00506 426 aa25.8■■□□□ 1.72
USP48-214ENST00000532737 MAN2B1O00754 1011 aa25.8■■□□□ 1.72
USP48-214ENST00000532737 ADH1CP00326 375 aa25.8■■□□□ 1.72
USP48-214ENST00000532737 CDC25BP30305 580 aa25.8■■□□□ 1.72
USP48-214ENST00000532737 GBP1P32455 592 aa25.8■■□□□ 1.72
USP48-214ENST00000532737 VCPP55072 806 aaKnown RBP25.8■■□□□ 1.72
USP48-214ENST00000532737 TCF15Q12870 199 aa25.8■■□□□ 1.72
USP48-214ENST00000532737 PPP1R15BQ5SWA1 713 aa25.8■■□□□ 1.72
USP48-214ENST00000532737 NAIF1Q69YI7 327 aaPredicted RBP25.8■■□□□ 1.72
USP48-214ENST00000532737 CWF19L1Q69YN2 538 aaKnown RBP25.8■■□□□ 1.72
USP48-214ENST00000532737 ZNF852Q6ZMS4 543 aa25.8■■□□□ 1.72
USP48-214ENST00000532737 FAM3CQ92520 227 aa25.8■■□□□ 1.72
USP48-214ENST00000532737 P2RY11Q96G91 374 aa25.8■■□□□ 1.72
USP48-214ENST00000532737 MSANTD3Q96H12 275 aa25.8■■□□□ 1.72
USP48-214ENST00000532737 CFAP57Q96MR6 1250 aa25.8■■□□□ 1.72
USP48-214ENST00000532737 PRRX2Q99811 253 aa25.8■■□□□ 1.72
USP48-214ENST00000532737 STOML2Q9UJZ1 356 aa25.8■■□□□ 1.72
USP48-214ENST00000532737 ATMINO43313 823 aaPredicted RBP25.79■■□□□ 1.72
USP48-214ENST00000532737 LATS1O95835 1130 aa25.79■■□□□ 1.72
USP48-214ENST00000532737 ADH5P11766 374 aa25.79■■□□□ 1.72
USP48-214ENST00000532737 PDGFRAP16234 1089 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms