RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 GJB6O95452 261 aa13.46□□□□□ -0.25
SMPD1-202ENST00000526280 NFATC1O95644 943 aa13.46□□□□□ -0.25
SMPD1-202ENST00000526280 GBP1P32455 592 aa13.46□□□□□ -0.25
SMPD1-202ENST00000526280 PRKCQQ04759 706 aa13.46□□□□□ -0.25
SMPD1-202ENST00000526280 MLF2Q15773 248 aaPredicted RBP13.46□□□□□ -0.25
SMPD1-202ENST00000526280 SLC18A3Q16572 532 aa13.46□□□□□ -0.25
SMPD1-202ENST00000526280 SLC25A52Q3SY17 297 aa13.46□□□□□ -0.25
SMPD1-202ENST00000526280 ALKBH5Q6P6C2 394 aaKnown RBP13.46□□□□□ -0.25
SMPD1-202ENST00000526280 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.46□□□□□ -0.25
SMPD1-202ENST00000526280 DENND1CQ8IV53 801 aa13.46□□□□□ -0.25
SMPD1-202ENST00000526280 UNC45BQ8IWX7 931 aa13.46□□□□□ -0.25
SMPD1-202ENST00000526280 SIX5Q8N196 739 aa13.46□□□□□ -0.25
SMPD1-202ENST00000526280 CPA6Q8N4T0 437 aa13.46□□□□□ -0.25
SMPD1-202ENST00000526280 TTC8Q8TAM2 541 aa13.46□□□□□ -0.25
SMPD1-202ENST00000526280 FCRL2Q96LA5 508 aaPredicted RBP13.46□□□□□ -0.25
SMPD1-202ENST00000526280 SELENOOQ9BVL4 669 aa13.46□□□□□ -0.25
SMPD1-202ENST00000526280 C1QTNF1Q9BXJ1 281 aa13.46□□□□□ -0.25
SMPD1-202ENST00000526280 ADAM33Q9BZ11 813 aa13.46□□□□□ -0.25
SMPD1-202ENST00000526280 C8orf33Q9H7E9 229 aaPredicted RBP13.46□□□□□ -0.25
SMPD1-202ENST00000526280 NHEJ1Q9H9Q4 299 aaPredicted RBP13.46□□□□□ -0.25
SMPD1-202ENST00000526280 IMPACTQ9P2X3 320 aa13.46□□□□□ -0.25
SMPD1-202ENST00000526280 STAP1Q9ULZ2 295 aa13.46□□□□□ -0.25
SMPD1-202ENST00000526280 NENFQ9UMX5 172 aa13.46□□□□□ -0.25
SMPD1-202ENST00000526280 SHISA7A6NL88 538 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 C2CD4BA6NLJ0 364 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 M0QYT0 321 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 CYP17A1P05093 508 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 MYBL1P10243 752 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 RFC1P35251 1148 aaPredicted RBP13.45□□□□□ -0.26
SMPD1-202ENST00000526280 STARD6P59095 220 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 NR1H3Q13133 447 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 MAMLD1Q13495 774 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 DHCR24Q15392 516 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 PPP1R15BQ5SWA1 713 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 CCDC122Q5T0U0 273 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 OTUD1Q5VV17 481 aaPredicted RBP13.45□□□□□ -0.26
SMPD1-202ENST00000526280 NUGGCQ68CJ6 796 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 PLEKHA7Q6IQ23 1121 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 DNAJC24Q6P3W2 148 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 RHBDF2Q6PJF5 856 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 ZSCAN30Q86W11 494 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 RALGPS2Q86X27 583 aaPredicted RBP13.45□□□□□ -0.26
SMPD1-202ENST00000526280 FAM217AQ8IXS0 508 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 EMC1Q8N766 993 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 JOSD2Q8TAC2 188 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 RXFP2Q8WXD0 754 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 AZIN2Q96A70 460 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 TRIM11Q96F44 468 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 PGAP3Q96FM1 320 aaPredicted RBP13.45□□□□□ -0.26
SMPD1-202ENST00000526280 SHDQ96IW2 340 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 CCDC42Q96M95 316 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 PANX2Q96RD6 677 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 FAM204AQ9H8W3 233 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 C11orf16Q9NQ32 467 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 PARVAQ9NVD7 372 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 DDIT4Q9NX09 232 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 CALCOCO1Q9P1Z2 691 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 STOML2Q9UJZ1 356 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 PIAS3Q9Y6X2 628 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 MYOFQ9NZM1 2061 aa13.45□□□□□ -0.26
SMPD1-202ENST00000526280 KCNU1A8MYU2 1149 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 SPECC1L-ADORA2AF8WAN1 911 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 AKR1B10O60218 316 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 LATS1O95835 1130 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 F9P00740 461 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 SLC2A3P11169 496 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 PDGFRAP16234 1089 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 TFE3P19532 575 aaPredicted RBP13.44□□□□□ -0.26
SMPD1-202ENST00000526280 CTHP32929 405 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 GJA4P35212 333 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 CHKAP35790 457 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 SOX9P48436 509 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 SULT1E1P49888 294 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 GFPT1Q06210 699 aaPredicted RBP13.44□□□□□ -0.26
SMPD1-202ENST00000526280 NME3Q13232 169 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 CCDC14Q49A88 953 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 ZC3H12AQ5D1E8 599 aaKnown RBP13.44□□□□□ -0.26
SMPD1-202ENST00000526280 LY6G5CQ5SRR4 150 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 TPRG1Q6ZUI0 275 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 BNIPLQ7Z465 357 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 TMEM25Q86YD3 366 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 SPC24Q8NBT2 197 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 CHFRQ96EP1 664 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 MSANTD3Q96H12 275 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 CFAP57Q96MR6 1250 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 TBCBQ99426 244 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 DEF6Q9H4E7 631 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 SPHK2Q9NRA0 654 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 TMEM51Q9NW97 253 aa13.44□□□□□ -0.26
SMPD1-202ENST00000526280 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.44□□□□□ -0.26
SMPD1-202ENST00000526280 CNOT8Q9UFF9 292 aaKnown RBP13.44□□□□□ -0.26
SMPD1-202ENST00000526280 SYNJ2BP-COX16A0A087WUM0 186 aa13.43□□□□□ -0.26
SMPD1-202ENST00000526280 MAN2B1O00754 1011 aa13.43□□□□□ -0.26
SMPD1-202ENST00000526280 ATMINO43313 823 aaPredicted RBP13.43□□□□□ -0.26
SMPD1-202ENST00000526280 ENDOD1O94919 500 aa13.43□□□□□ -0.26
SMPD1-202ENST00000526280 ADH1CP00326 375 aa13.43□□□□□ -0.26
SMPD1-202ENST00000526280 PDGFBP01127 241 aaPredicted RBP13.43□□□□□ -0.26
SMPD1-202ENST00000526280 ABCB4P21439 1286 aa13.43□□□□□ -0.26
SMPD1-202ENST00000526280 FECHP22830 423 aa13.43□□□□□ -0.26
SMPD1-202ENST00000526280 SDC4P31431 198 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms