RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 SLC26A9Q7LBE3 791 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 C14orf80Q86SX3 495 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 PHF13Q86YI8 300 aaPredicted RBP4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 CNGA4Q8IV77 575 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 ADGRG2Q8IZP9 1017 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 SCML4Q8N228 414 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 PYROXD2Q8N2H3 581 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 MSANTD4Q8NCY6 345 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 ACRBPQ8NEB7 543 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 CSGALNACT1Q8TDX6 532 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 DEPDC1BQ8WUY9 529 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 OSCP1Q8WVF1 389 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 SYN2Q92777 582 aaPredicted RBP4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 EDAQ92838 391 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 FCRL2Q96LA5 508 aaPredicted RBP4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 CCDC42Q96M95 316 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 ZNF830Q96NB3 372 aaPredicted RBP4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 SLC2A13Q96QE2 648 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 NPY6RQ99463 290 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 FAM83CQ9BQN1 747 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 DESI2Q9BSY9 194 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 DDX23Q9BUQ8 820 aaKnown RBP4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 SIK2Q9H0K1 926 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 NUCKS1Q9H1E3 243 aaKnown RBP4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 ISCUQ9H1K1 167 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 MFSD1Q9H3U5 465 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 KIF9Q9HAQ2 790 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 OSGEPQ9NPF4 335 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 OLA1Q9NTK5 396 aaKnown RBP4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 TRIM10Q9UDY6 481 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 LSM7Q9UK45 103 aaKnown RBP4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 CLEC4EQ9ULY5 219 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 HYOU1Q9Y4L1 999 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 PIAS3Q9Y6X2 628 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 DENND4AQ7Z401 1863 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 DOCK6Q96HP0 2047 aa4.79□□□□□ -1.64
CHMP4A-202ENST00000524955 PTPRDP23468 1912 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 E2F8A0AVK6 867 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 RCCD1A6NED2 376 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 C2CD4BA6NLJ0 364 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 SIGLEC16A6NMB1 481 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 SPECC1L-ADORA2AF8WAN1 911 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 PI4K2BG5E9Z4 385 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 FAM72CH0Y354 149 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 CHADO15335 359 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 SART1O43290 800 aaKnown RBP4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 BUB1O43683 1085 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 ACSL4O60488 711 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 TBL1XO60907 577 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 SRGAP2O75044 1071 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 PAGE1O75459 146 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 IGLV3-25P01717 112 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 ADH5P11766 374 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 TNNT1P13805 278 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 TYRP14679 529 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 GPD1P21695 349 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 PSMA2P25787 234 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 CDC25BP30305 580 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 GJA4P35212 333 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 NOS2P35228 1153 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 WASP42768 502 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 SSR1P43307 286 aaKnown RBP4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 HARS2P49590 506 aaKnown RBP4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 GALK1P51570 392 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 SNX16P57768 344 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 RPS24P62847 133 aaKnown RBP4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 COG7P83436 770 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 C1QBPQ07021 282 aaKnown RBP4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 SIGLEC14Q08ET2 396 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 MAPK8IP2Q13387 824 aaPredicted RBP4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 GSE1Q14687 1217 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 MLF2Q15773 248 aaPredicted RBP4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 SLC18A3Q16572 532 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 CA9Q16790 459 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 GAB4Q2WGN9 574 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 ITPRIPL2Q3MIP1 535 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 SLC25A52Q3SY17 297 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 ARHGAP29Q52LW3 1261 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 MS4A13Q5J8X5 152 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 PPP1R15BQ5SWA1 713 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 FAM182AQ5T1J6 154 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 FAM72AQ5TYM5 149 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 EMC10Q5UCC4 262 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 PIK3R6Q5UE93 754 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 TXNRD3NBQ6F5E7 133 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 ASTLQ6HA08 431 aaPredicted RBP4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 PLEKHA7Q6IQ23 1121 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 FAM72DQ6L9T8 149 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 MSANTD2Q6P1R3 559 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 DCUN1D2Q6PH85 259 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 Q6ZS52 159 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 HTR3DQ70Z44 454 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 TADA2BQ86TJ2 420 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 VPS36Q86VN1 386 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 CHSY1Q86X52 802 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 FAM72BQ86X60 149 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 TMEM139Q8IV31 216 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 LGI2Q8N0V4 545 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 CPA6Q8N4T0 437 aa4.78□□□□□ -1.64
CHMP4A-202ENST00000524955 ARFGAP1Q8N6T3 406 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms