RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 CAPN9O14815 690 aa21.52■■□□□ 1.04
TRIM35-203ENST00000521253 TEX33O43247 280 aa21.52■■□□□ 1.04
TRIM35-203ENST00000521253 PENKP01210 267 aaPredicted RBP21.52■■□□□ 1.04
TRIM35-203ENST00000521253 CHRM1P11229 460 aaPredicted RBP21.52■■□□□ 1.04
TRIM35-203ENST00000521253 CDH5P33151 784 aaPredicted RBP21.52■■□□□ 1.04
TRIM35-203ENST00000521253 SOX5P35711 763 aa21.52■■□□□ 1.04
TRIM35-203ENST00000521253 NRLP54845 237 aa21.52■■□□□ 1.04
TRIM35-203ENST00000521253 DMWDQ09019 674 aa21.52■■□□□ 1.04
TRIM35-203ENST00000521253 ZSCAN23Q3MJ62 389 aa21.52■■□□□ 1.04
TRIM35-203ENST00000521253 FYB2Q5VWT5 728 aa21.52■■□□□ 1.04
TRIM35-203ENST00000521253 GRAMD4Q6IC98 578 aa21.52■■□□□ 1.04
TRIM35-203ENST00000521253 FAM183BPQ6ZVS7 135 aa21.52■■□□□ 1.04
TRIM35-203ENST00000521253 TAC4Q86UU9 113 aa21.52■■□□□ 1.04
TRIM35-203ENST00000521253 CPXM2Q8N436 756 aa21.52■■□□□ 1.04
TRIM35-203ENST00000521253 ADAM32Q8TC27 787 aa21.52■■□□□ 1.04
TRIM35-203ENST00000521253 IPO4Q8TEX9 1081 aaKnown RBP21.52■■□□□ 1.04
TRIM35-203ENST00000521253 SYNCQ9H7C4 482 aa21.52■■□□□ 1.04
TRIM35-203ENST00000521253 CBX8Q9HC52 389 aa21.52■■□□□ 1.04
TRIM35-203ENST00000521253 RTN4Q9NQC3 1192 aaKnown RBP21.52■■□□□ 1.04
TRIM35-203ENST00000521253 NOCTQ9UK39 431 aaKnown RBP21.52■■□□□ 1.04
TRIM35-203ENST00000521253 TBC1D3BA6NDS4 549 aa21.51■■□□□ 1.03
TRIM35-203ENST00000521253 LATS1O95835 1130 aa21.51■■□□□ 1.03
TRIM35-203ENST00000521253 MMEP08473 750 aa21.51■■□□□ 1.03
TRIM35-203ENST00000521253 STAT1P42224 750 aa21.51■■□□□ 1.03
TRIM35-203ENST00000521253 TNFRSF4P43489 277 aa21.51■■□□□ 1.03
TRIM35-203ENST00000521253 TBX4P57082 545 aa21.51■■□□□ 1.03
TRIM35-203ENST00000521253 SNX16P57768 344 aa21.51■■□□□ 1.03
TRIM35-203ENST00000521253 RING1Q06587 406 aa21.51■■□□□ 1.03
TRIM35-203ENST00000521253 SKOR2Q2VWA4 1001 aaPredicted RBP21.51■■□□□ 1.03
TRIM35-203ENST00000521253 PREPLQ4J6C6 727 aaPredicted RBP21.51■■□□□ 1.03
TRIM35-203ENST00000521253 EMC10Q5UCC4 262 aa21.51■■□□□ 1.03
TRIM35-203ENST00000521253 OR6B2Q6IFH4 312 aa21.51■■□□□ 1.03
TRIM35-203ENST00000521253 OLFML1Q6UWY5 402 aa21.51■■□□□ 1.03
TRIM35-203ENST00000521253 SYT13Q7L8C5 426 aa21.51■■□□□ 1.03
TRIM35-203ENST00000521253 ASCL5Q7RTU5 278 aa21.51■■□□□ 1.03
TRIM35-203ENST00000521253 TERB1Q8NA31 727 aa21.51■■□□□ 1.03
TRIM35-203ENST00000521253 SLC20A1Q8WUM9 679 aa21.51■■□□□ 1.03
TRIM35-203ENST00000521253 ACDQ96AP0 544 aa21.51■■□□□ 1.03
TRIM35-203ENST00000521253 SERPINB11Q96P15 392 aa21.51■■□□□ 1.03
TRIM35-203ENST00000521253 SEMA4AQ9H3S1 761 aa21.51■■□□□ 1.03
TRIM35-203ENST00000521253 STOML2Q9UJZ1 356 aa21.51■■□□□ 1.03
TRIM35-203ENST00000521253 SLC8A2Q9UPR5 921 aa21.51■■□□□ 1.03
TRIM35-203ENST00000521253 FAM170AA1A519 330 aa21.5■■□□□ 1.03
TRIM35-203ENST00000521253 PRR23AA6NEV1 266 aa21.5■■□□□ 1.03
TRIM35-203ENST00000521253 LILRB5O75023 590 aa21.5■■□□□ 1.03
TRIM35-203ENST00000521253 GLI1P08151 1106 aa21.5■■□□□ 1.03
TRIM35-203ENST00000521253 HOXA6P31267 233 aa21.5■■□□□ 1.03
TRIM35-203ENST00000521253 KIR2DL1P43626 348 aaPredicted RBP21.5■■□□□ 1.03
TRIM35-203ENST00000521253 FNTBP49356 437 aa21.5■■□□□ 1.03
TRIM35-203ENST00000521253 MRPS21P82921 87 aaKnown RBP21.5■■□□□ 1.03
TRIM35-203ENST00000521253 NNTQ13423 1086 aa21.5■■□□□ 1.03
TRIM35-203ENST00000521253 EFHC1Q5JVL4 640 aa21.5■■□□□ 1.03
TRIM35-203ENST00000521253 ADGRF1Q5T601 910 aa21.5■■□□□ 1.03
TRIM35-203ENST00000521253 NUGGCQ68CJ6 796 aa21.5■■□□□ 1.03
TRIM35-203ENST00000521253 HEATR6Q6AI08 1181 aaKnown RBP21.5■■□□□ 1.03
TRIM35-203ENST00000521253 TOGARAM2Q6ZUX3 1019 aa21.5■■□□□ 1.03
TRIM35-203ENST00000521253 UNC45BQ8IWX7 931 aa21.5■■□□□ 1.03
TRIM35-203ENST00000521253 FCRL2Q96LA5 508 aaPredicted RBP21.5■■□□□ 1.03
TRIM35-203ENST00000521253 SLC2A13Q96QE2 648 aa21.5■■□□□ 1.03
TRIM35-203ENST00000521253 ASNSD1Q9NWL6 643 aa21.5■■□□□ 1.03
TRIM35-203ENST00000521253 FBXO10Q9UK96 956 aa21.5■■□□□ 1.03
TRIM35-203ENST00000521253 TLR6Q9Y2C9 796 aa21.5■■□□□ 1.03
TRIM35-203ENST00000521253 ATG2BQ96BY7 2078 aa21.5■■□□□ 1.03
TRIM35-203ENST00000521253 GFRA2O00451 464 aa21.49■■□□□ 1.03
TRIM35-203ENST00000521253 GFRA3O60609 400 aa21.49■■□□□ 1.03
TRIM35-203ENST00000521253 HSF2BPO75031 334 aa21.49■■□□□ 1.03
TRIM35-203ENST00000521253 GRAP2O75791 330 aa21.49■■□□□ 1.03
TRIM35-203ENST00000521253 LSM8O95777 96 aaKnown RBP21.49■■□□□ 1.03
TRIM35-203ENST00000521253 CYBBP04839 570 aa21.49■■□□□ 1.03
TRIM35-203ENST00000521253 CISD3P0C7P0 127 aa21.49■■□□□ 1.03
TRIM35-203ENST00000521253 TIE1P35590 1138 aa21.49■■□□□ 1.03
TRIM35-203ENST00000521253 DGKGP49619 791 aa21.49■■□□□ 1.03
TRIM35-203ENST00000521253 PITX1P78337 314 aaPredicted RBP21.49■■□□□ 1.03
TRIM35-203ENST00000521253 CDR2Q01850 454 aa21.49■■□□□ 1.03
TRIM35-203ENST00000521253 SLC6A3Q01959 620 aa21.49■■□□□ 1.03
TRIM35-203ENST00000521253 DMC1Q14565 340 aa21.49■■□□□ 1.03
TRIM35-203ENST00000521253 DCAF6Q58WW2 860 aa21.49■■□□□ 1.03
TRIM35-203ENST00000521253 C10orf76Q5T2E6 689 aa21.49■■□□□ 1.03
TRIM35-203ENST00000521253 LUZP1Q86V48 1076 aa21.49■■□□□ 1.03
TRIM35-203ENST00000521253 ZNF677Q86XU0 584 aa21.49■■□□□ 1.03
TRIM35-203ENST00000521253 DEFB106AQ8N104 65 aa21.49■■□□□ 1.03
TRIM35-203ENST00000521253 CCDC33Q8N5R6 958 aa21.49■■□□□ 1.03
TRIM35-203ENST00000521253 DDI1Q8WTU0 396 aa21.49■■□□□ 1.03
TRIM35-203ENST00000521253 SLC39A13Q96H72 371 aa21.49■■□□□ 1.03
TRIM35-203ENST00000521253 HHIPQ96QV1 700 aa21.49■■□□□ 1.03
TRIM35-203ENST00000521253 ZDHHC4Q9NPG8 344 aa21.49■■□□□ 1.03
TRIM35-203ENST00000521253 RIF1Q5UIP0 2472 aaKnown RBP21.48■■□□□ 1.03
TRIM35-203ENST00000521253 IRAK2O43187 625 aa21.48■■□□□ 1.03
TRIM35-203ENST00000521253 TSPAN3O60637 253 aa21.48■■□□□ 1.03
TRIM35-203ENST00000521253 TRUB2O95900 331 aaKnown RBP21.48■■□□□ 1.03
TRIM35-203ENST00000521253 IGLV3-25P01717 112 aa21.48■■□□□ 1.03
TRIM35-203ENST00000521253 CHRNB2P17787 502 aa21.48■■□□□ 1.03
TRIM35-203ENST00000521253 PXNP49023 591 aaPredicted RBP21.48■■□□□ 1.03
TRIM35-203ENST00000521253 SLC11A2P49281 568 aa21.48■■□□□ 1.03
TRIM35-203ENST00000521253 NOMO3P69849 1222 aa21.48■■□□□ 1.03
TRIM35-203ENST00000521253 FILIP1LQ4L180 1135 aa21.48■■□□□ 1.03
TRIM35-203ENST00000521253 NUDT18Q6ZVK8 323 aa21.48■■□□□ 1.03
TRIM35-203ENST00000521253 SLC26A9Q7LBE3 791 aa21.48■■□□□ 1.03
TRIM35-203ENST00000521253 LONP2Q86WA8 852 aa21.48■■□□□ 1.03
TRIM35-203ENST00000521253 ERICH1Q86X53 443 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms