RNA–Protein interactions for RNA: ENST00000520865.5

CTNNA1-225, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-225ENST00000520865 ATP8B3O60423 1300 aa6.96□□□□□ -1.3
CTNNA1-225ENST00000520865 PDS5AQ29RF7 1337 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-225ENST00000520865 A0A0J9YVX5 310 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 UBA6A0AVT1 1052 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 ARHGAP10A1A4S6 786 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 SIGLEC16A6NMB1 481 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 VSTM5A8MXK1 200 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 A8MXQ7 604 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 SPECC1L-ADORA2AF8WAN1 911 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 NDC80O14777 642 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 DCTN3O75935 186 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 GFPT2O94808 682 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 GLI1P08151 1106 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 PDHA1P08559 390 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 CELA3BP08861 270 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 SNRPA1P09661 255 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 NPR1P16066 1061 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 XBP1P17861 261 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 CARSP49589 748 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 MAGOHP61326 146 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 AP1B1Q10567 949 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 AIMP1Q12904 312 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 RCN2Q14257 317 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 GALEQ14376 348 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 SPCS2Q15005 226 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 ACAP2Q15057 778 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 RCN1Q15293 331 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 KRT31Q15323 416 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 FAM133BQ5BKY9 247 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 TCP11X2Q5H9J9 407 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 WDR78Q5VTH9 848 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 TEPPQ6URK8 271 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 B3GNT6Q6ZMB0 384 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 KANSL1Q7Z3B3 1105 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 SLC41A1Q8IVJ1 513 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 FAM126BQ8IXS8 530 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 SPICE1Q8N0Z3 855 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 NUP93Q8N1F7 819 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 HIPK4Q8NE63 616 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 NAT14Q8WUY8 206 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 WASF1Q92558 559 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 MAGOHBQ96A72 148 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 HSPBAP1Q96EW2 488 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 SLC39A13Q96H72 371 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 ACAP3Q96P50 834 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 MAP3K14Q99558 947 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 FSD1Q9BTV5 496 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 ROPN1BQ9BZX4 212 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 DDX47Q9H0S4 455 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 DPH5Q9H2P9 285 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 SLITRK6Q9H5Y7 841 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 ROPN1Q9HAT0 212 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 SAR1AQ9NR31 198 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 PLK2Q9NYY3 685 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 USP36Q9P275 1121 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 ZNHIT2Q9UHR6 403 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 NUDT5Q9UKK9 219 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 AGAP1Q9UPQ3 857 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 MAP3K2Q9Y2U5 619 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 GIT1Q9Y2X7 761 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 ASB1Q9Y576 335 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 GPR45Q9Y5Y3 372 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 ZNF541Q9H0D2 1346 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 DLEC1Q9Y238 1755 aa6.95□□□□□ -1.3
CTNNA1-225ENST00000520865 PCNTO95613 3336 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 COL11A2P13942 1736 aaPredicted RBP6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 A0A0U1RQJ8 604 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 LGALS16A8MUM7 142 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 GOLGA8TH3BQL2 631 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 FOXN1O15353 648 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 TIMM44O43615 452 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 AP1G1O43747 822 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 HYAL3O43820 417 aaPredicted RBP6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 ATP9AO75110 1047 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 TFRCP02786 760 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 GOLGA8HP0CJ92 632 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 FDPSP14324 419 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 MYL6BP14649 208 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 PTPN2P17706 415 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 MAPKAPK2P49137 400 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 TUBP50607 506 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 DRG2P55039 364 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 SLC6A3Q01959 620 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 ALDH6A1Q02252 535 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 SLC34A1Q06495 639 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 CCDC6Q16204 474 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 KRT71Q3SY84 523 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 CCDC14Q49A88 953 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 MCMDC2Q4G0Z9 681 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 RILPL1Q5EBL4 403 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 CXorf57Q6NSI4 855 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 TMEM53Q6P2H8 277 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 BORAQ6PGQ7 559 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 TMTC3Q6ZXV5 915 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 NANOGNBQ7Z5D8 188 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 LDHDQ86WU2 507 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 PHYKPLQ8IUZ5 450 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 LRRC34Q8IZ02 419 aa6.94□□□□□ -1.3
CTNNA1-225ENST00000520865 ZBED8Q8IZ13 594 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms