RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 RNF225M0QZC1 329 aaPredicted RBP13.02□□□□□ -0.33
CSMD1-205ENST00000519623 O00370 1275 aa13.02□□□□□ -0.33
CSMD1-205ENST00000519623 AP5Z1O43299 807 aa13.02□□□□□ -0.33
CSMD1-205ENST00000519623 ZNF217O75362 1048 aa13.02□□□□□ -0.33
CSMD1-205ENST00000519623 CD19P15391 556 aa13.02□□□□□ -0.33
CSMD1-205ENST00000519623 BMP6P22004 513 aa13.02□□□□□ -0.33
CSMD1-205ENST00000519623 TBXAS1P24557 533 aaPredicted RBP13.02□□□□□ -0.33
CSMD1-205ENST00000519623 BCAT1P54687 386 aa13.02□□□□□ -0.33
CSMD1-205ENST00000519623 YWHAEP62258 255 aaKnown RBP13.02□□□□□ -0.33
CSMD1-205ENST00000519623 SHC2P98077 582 aa13.02□□□□□ -0.33
CSMD1-205ENST00000519623 RPL6Q02878 288 aaKnown RBP13.02□□□□□ -0.33
CSMD1-205ENST00000519623 BST2Q10589 180 aaKnown RBP13.02□□□□□ -0.33
CSMD1-205ENST00000519623 LMAN2Q12907 356 aa13.02□□□□□ -0.33
CSMD1-205ENST00000519623 ENPP2Q13822 863 aa13.02□□□□□ -0.33
CSMD1-205ENST00000519623 BECN1Q14457 450 aa13.02□□□□□ -0.33
CSMD1-205ENST00000519623 BSPRYQ5W0U4 402 aa13.02□□□□□ -0.33
CSMD1-205ENST00000519623 LCLAT1Q6UWP7 414 aa13.02□□□□□ -0.33
CSMD1-205ENST00000519623 SLC41A1Q8IVJ1 513 aa13.02□□□□□ -0.33
CSMD1-205ENST00000519623 RBBP8NLQ8NC74 664 aaPredicted RBP13.02□□□□□ -0.33
CSMD1-205ENST00000519623 KCTD13Q8WZ19 329 aa13.02□□□□□ -0.33
CSMD1-205ENST00000519623 CEP63Q96MT8 703 aa13.02□□□□□ -0.33
CSMD1-205ENST00000519623 ZSWIM1Q9BR11 485 aa13.02□□□□□ -0.33
CSMD1-205ENST00000519623 NUSAP1Q9BXS6 441 aaKnown RBP13.02□□□□□ -0.33
CSMD1-205ENST00000519623 SLC6A17Q9H1V8 727 aa13.02□□□□□ -0.33
CSMD1-205ENST00000519623 LRRC4Q9HBW1 653 aa13.02□□□□□ -0.33
CSMD1-205ENST00000519623 THAP10Q9P2Z0 257 aaPredicted RBP13.02□□□□□ -0.33
CSMD1-205ENST00000519623 HESX1Q9UBX0 185 aa13.02□□□□□ -0.33
CSMD1-205ENST00000519623 MAN1B1Q9UKM7 699 aa13.02□□□□□ -0.33
CSMD1-205ENST00000519623 ANGPTL2Q9UKU9 493 aa13.02□□□□□ -0.33
CSMD1-205ENST00000519623 STON1Q9Y6Q2 735 aa13.02□□□□□ -0.33
CSMD1-205ENST00000519623 ADAMTS9Q9P2N4 1935 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 USP24Q9UPU5 2620 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 YJEFN3A6XGL0 299 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 E7ENQ6 273 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 PSMA7O14818 248 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 ZBTB24O43167 697 aaPredicted RBP13.01□□□□□ -0.33
CSMD1-205ENST00000519623 PAEPP09466 180 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 ENGP17813 658 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 CSRP1P21291 193 aaKnown RBP13.01□□□□□ -0.33
CSMD1-205ENST00000519623 HOXD12P35452 270 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 DPP6P42658 865 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 NOVA1P51513 510 aaKnown RBP13.01□□□□□ -0.33
CSMD1-205ENST00000519623 ZNF33AQ06730 810 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 ADIGQ0VDE8 80 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 CNGA2Q16280 664 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 DUOXA1Q1HG43 343 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 SH3PXD2AQ5TCZ1 1133 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 TMEM215Q68D42 235 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 TTI2Q6NXR4 508 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 TMEM270Q6UE05 265 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 METTL3Q86U44 580 aaKnown RBP13.01□□□□□ -0.33
CSMD1-205ENST00000519623 FMNL3Q8IVF7 1028 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 SCML4Q8N228 414 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 SLC35F5Q8WV83 523 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 EDEM1Q92611 657 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 PLD4Q96BZ4 506 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 ZNF419Q96HQ0 510 aaPredicted RBP13.01□□□□□ -0.33
CSMD1-205ENST00000519623 SLC2A11Q9BYW1 496 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 CD93Q9NPY3 652 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 OLA1Q9NTK5 396 aaKnown RBP13.01□□□□□ -0.33
CSMD1-205ENST00000519623 ELOVL2Q9NXB9 296 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 SFMBT1Q9UHJ3 866 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 HOOK1Q9UJC3 728 aaKnown RBP13.01□□□□□ -0.33
CSMD1-205ENST00000519623 CYP8B1Q9UNU6 501 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 CACNA1EQ15878 2313 aa13.01□□□□□ -0.33
CSMD1-205ENST00000519623 ATXN2Q99700 1313 aaKnown RBP13□□□□□ -0.33
CSMD1-205ENST00000519623 NPC1O15118 1278 aa13□□□□□ -0.33
CSMD1-205ENST00000519623 KRT37O76014 449 aa13□□□□□ -0.33
CSMD1-205ENST00000519623 CYBBP04839 570 aa13□□□□□ -0.33
CSMD1-205ENST00000519623 SERPINF2P08697 491 aa13□□□□□ -0.33
CSMD1-205ENST00000519623 SETSIPP0DME0 302 aa13□□□□□ -0.33
CSMD1-205ENST00000519623 CEACAM1P13688 526 aa13□□□□□ -0.33
CSMD1-205ENST00000519623 IL12RB1P42701 662 aa13□□□□□ -0.33
CSMD1-205ENST00000519623 DAOAP59103 153 aa13□□□□□ -0.33
CSMD1-205ENST00000519623 STIM1Q13586 685 aa13□□□□□ -0.33
CSMD1-205ENST00000519623 UAP1L1Q3KQV9 507 aa13□□□□□ -0.33
CSMD1-205ENST00000519623 FUT11Q495W5 492 aa13□□□□□ -0.33
CSMD1-205ENST00000519623 PMF1Q6P1K2 205 aa13□□□□□ -0.33
CSMD1-205ENST00000519623 FOXR2Q6PJQ5 311 aa13□□□□□ -0.33
CSMD1-205ENST00000519623 CEP76Q8TAP6 659 aa13□□□□□ -0.33
CSMD1-205ENST00000519623 DDI1Q8WTU0 396 aa13□□□□□ -0.33
CSMD1-205ENST00000519623 KAT5Q92993 513 aa13□□□□□ -0.33
CSMD1-205ENST00000519623 NT5C1BQ96P26 610 aa13□□□□□ -0.33
CSMD1-205ENST00000519623 IPO9Q96P70 1041 aaKnown RBP13□□□□□ -0.33
CSMD1-205ENST00000519623 MKRN2Q9H000 416 aaKnown RBP13□□□□□ -0.33
CSMD1-205ENST00000519623 CAPN10Q9HC96 672 aa13□□□□□ -0.33
CSMD1-205ENST00000519623 CNGB3Q9NQW8 809 aa13□□□□□ -0.33
CSMD1-205ENST00000519623 ITM2CQ9NQX7 267 aa13□□□□□ -0.33
CSMD1-205ENST00000519623 ABCC13Q9NSE7 274 aa13□□□□□ -0.33
CSMD1-205ENST00000519623 STOML2Q9UJZ1 356 aa13□□□□□ -0.33
CSMD1-205ENST00000519623 SLC6A14Q9UN76 642 aa13□□□□□ -0.33
CSMD1-205ENST00000519623 WASF3Q9UPY6 502 aa13□□□□□ -0.33
CSMD1-205ENST00000519623 HBS1LQ9Y450 684 aaKnown RBP13□□□□□ -0.33
CSMD1-205ENST00000519623 PCDHB4Q9Y5E5 795 aa13□□□□□ -0.33
CSMD1-205ENST00000519623 P4HA2O15460 535 aa12.99□□□□□ -0.33
CSMD1-205ENST00000519623 TIMM44O43615 452 aa12.99□□□□□ -0.33
CSMD1-205ENST00000519623 CALCAP01258 141 aa12.99□□□□□ -0.33
CSMD1-205ENST00000519623 LCP1P13796 627 aa12.99□□□□□ -0.33
CSMD1-205ENST00000519623 HOXD9P28356 352 aaPredicted RBP12.99□□□□□ -0.33
CSMD1-205ENST00000519623 PPP1R2P41236 205 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms