RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 PENKP01210 267 aaPredicted RBP13.88□□□□□ -0.19
VEGFA-219ENST00000518824 CHRNB2P17787 502 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 CDK11BP21127 795 aaKnown RBP13.88□□□□□ -0.19
VEGFA-219ENST00000518824 SLC6A4P31645 630 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 GRIA2P42262 883 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 WASP42768 502 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 ACADSBP45954 432 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 UBXN1Q04323 297 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 DMC1Q14565 340 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 FBXO43Q4G163 708 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 NADSYN1Q6IA69 706 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 FAM217AQ8IXS0 508 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 DCLK2Q8N568 766 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 TERB1Q8NA31 727 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 IL17RCQ8NAC3 791 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 EPS8L1Q8TE68 723 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 ATRIPQ8WXE1 791 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 FCRL2Q96LA5 508 aaPredicted RBP13.88□□□□□ -0.19
VEGFA-219ENST00000518824 ACOX2Q99424 681 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 ADAM33Q9BZ11 813 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 LHX5Q9H2C1 402 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 DEC1Q9P2X7 70 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 XPO7Q9UIA9 1087 aaKnown RBP13.88□□□□□ -0.19
VEGFA-219ENST00000518824 PCDHGA2Q9Y5H1 932 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 TBC1D3BA6NDS4 549 aa13.87□□□□□ -0.19
VEGFA-219ENST00000518824 KLF8O95600 359 aaPredicted RBP13.87□□□□□ -0.19
VEGFA-219ENST00000518824 LMNAP02545 664 aaKnown RBP13.87□□□□□ -0.19
VEGFA-219ENST00000518824 KRT9P35527 623 aa13.87□□□□□ -0.19
VEGFA-219ENST00000518824 ZNF165P49910 485 aa13.87□□□□□ -0.19
VEGFA-219ENST00000518824 TBX4P57082 545 aa13.87□□□□□ -0.19
VEGFA-219ENST00000518824 FAM133BQ5BKY9 247 aaKnown RBP13.87□□□□□ -0.19
VEGFA-219ENST00000518824 FKBP15Q5T1M5 1219 aa13.87□□□□□ -0.19
VEGFA-219ENST00000518824 C10orf76Q5T2E6 689 aa13.87□□□□□ -0.19
VEGFA-219ENST00000518824 EGFLAMQ63HQ2 1017 aa13.87□□□□□ -0.19
VEGFA-219ENST00000518824 GRAMD4Q6IC98 578 aa13.87□□□□□ -0.19
VEGFA-219ENST00000518824 OR6B2Q6IFH4 312 aa13.87□□□□□ -0.19
VEGFA-219ENST00000518824 RFWD3Q6PCD5 774 aa13.87□□□□□ -0.19
VEGFA-219ENST00000518824 ZC3H14Q6PJT7 736 aaKnown RBP13.87□□□□□ -0.19
VEGFA-219ENST00000518824 OLFML1Q6UWY5 402 aa13.87□□□□□ -0.19
VEGFA-219ENST00000518824 SYT13Q7L8C5 426 aa13.87□□□□□ -0.19
VEGFA-219ENST00000518824 DEFB106AQ8N104 65 aa13.87□□□□□ -0.19
VEGFA-219ENST00000518824 CPXM2Q8N436 756 aa13.87□□□□□ -0.19
VEGFA-219ENST00000518824 TXNDC5Q8NBS9 432 aaKnown RBP13.87□□□□□ -0.19
VEGFA-219ENST00000518824 SLC39A13Q96H72 371 aa13.87□□□□□ -0.19
VEGFA-219ENST00000518824 NAP1L5Q96NT1 182 aaPredicted RBP13.87□□□□□ -0.19
VEGFA-219ENST00000518824 BPIFA3Q9BQP9 254 aa13.87□□□□□ -0.19
VEGFA-219ENST00000518824 DCLK3Q9C098 648 aa13.87□□□□□ -0.19
VEGFA-219ENST00000518824 CALCOCO1Q9P1Z2 691 aa13.87□□□□□ -0.19
VEGFA-219ENST00000518824 NOCTQ9UK39 431 aaKnown RBP13.87□□□□□ -0.19
VEGFA-219ENST00000518824 FBXO10Q9UK96 956 aa13.87□□□□□ -0.19
VEGFA-219ENST00000518824 SLC8A2Q9UPR5 921 aa13.87□□□□□ -0.19
VEGFA-219ENST00000518824 IGLV3-25P01717 112 aa13.86□□□□□ -0.19
VEGFA-219ENST00000518824 TFE3P19532 575 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-219ENST00000518824 HOXD9P28356 352 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-219ENST00000518824 CDH5P33151 784 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-219ENST00000518824 TNFRSF4P43489 277 aa13.86□□□□□ -0.19
VEGFA-219ENST00000518824 HARS2P49590 506 aaKnown RBP13.86□□□□□ -0.19
VEGFA-219ENST00000518824 DGKGP49619 791 aa13.86□□□□□ -0.19
VEGFA-219ENST00000518824 EIF4EBP2Q13542 120 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-219ENST00000518824 GEN1Q17RS7 908 aa13.86□□□□□ -0.19
VEGFA-219ENST00000518824 OTUD1Q5VV17 481 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-219ENST00000518824 WFDC5Q8TCV5 224 aa13.86□□□□□ -0.19
VEGFA-219ENST00000518824 EXOC4Q96A65 974 aa13.86□□□□□ -0.19
VEGFA-219ENST00000518824 ERGIC2Q96RQ1 377 aa13.86□□□□□ -0.19
VEGFA-219ENST00000518824 CBX8Q9HC52 389 aa13.86□□□□□ -0.19
VEGFA-219ENST00000518824 WDR35Q9P2L0 1181 aa13.86□□□□□ -0.19
VEGFA-219ENST00000518824 STOML2Q9UJZ1 356 aa13.86□□□□□ -0.19
VEGFA-219ENST00000518824 MMP17Q9ULZ9 603 aa13.86□□□□□ -0.19
VEGFA-219ENST00000518824 INVSQ9Y283 1065 aa13.86□□□□□ -0.19
VEGFA-219ENST00000518824 ZNF510Q9Y2H8 683 aa13.86□□□□□ -0.19
VEGFA-219ENST00000518824 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.85□□□□□ -0.19
VEGFA-219ENST00000518824 WASH3PC4AMC7 463 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 DCLK1O15075 740 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 IRAK2O43187 625 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 ACSL4O60488 711 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 ATG13O75143 517 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 TRUB2O95900 331 aaKnown RBP13.85□□□□□ -0.19
VEGFA-219ENST00000518824 HOXA6P31267 233 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 SOX5P35711 763 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 CHKAP35790 457 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 BPIFB4P59827 614 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 YWHAZP63104 245 aaKnown RBP13.85□□□□□ -0.19
VEGFA-219ENST00000518824 NOMO3P69849 1222 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 MRPS21P82921 87 aaKnown RBP13.85□□□□□ -0.19
VEGFA-219ENST00000518824 FMO1Q01740 532 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 PPP2R5DQ14738 602 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 DCAF6Q58WW2 860 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 ZC3H12AQ5D1E8 599 aaKnown RBP13.85□□□□□ -0.19
VEGFA-219ENST00000518824 TMEM215Q68D42 235 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 TRNP1Q6NT89 227 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 PHLDB2Q86SQ0 1253 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 LUZP1Q86V48 1076 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 WDR5BQ86VZ2 330 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 LONP2Q86WA8 852 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 ZNF513Q8N8E2 541 aaPredicted RBP13.85□□□□□ -0.19
VEGFA-219ENST00000518824 DDI1Q8WTU0 396 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 CPA5Q8WXQ8 436 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 GOLGA1Q92805 767 aa13.85□□□□□ -0.19
VEGFA-219ENST00000518824 PCMTD1Q96MG8 357 aaPredicted RBP13.85□□□□□ -0.19
VEGFA-219ENST00000518824 PRICKLE1Q96MT3 831 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms