RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 MAGEA1P43355 309 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 KPNA1P52294 538 aaPredicted RBP7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 RNASE9P60153 205 aaKnown RBP7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 GPC5P78333 572 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 KRT83P78385 493 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 COG7P83436 770 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 CCZ1BP86790 482 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 CCZ1P86791 482 aaPredicted RBP7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 MAMLD1Q13495 774 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 MTF1Q14872 753 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 TAF5Q15542 800 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 ZNF77Q15935 545 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 FAM78AQ5JUQ0 283 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 SYPL2Q5VXT5 272 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 RHOT2Q8IXI1 618 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 ZDHHC14Q8IZN3 488 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 CELF5Q8N6W0 485 aaKnown RBP7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 EMC1Q8N766 993 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 JOSD2Q8TAC2 188 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 DQX1Q8TE96 717 aaKnown RBP7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 FNIP1Q8TF40 1166 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 DEPDC1BQ8WUY9 529 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 RFFLQ8WZ73 363 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 USP13Q92995 863 aaPredicted RBP7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 NXPE3Q969Y0 559 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 PLD4Q96BZ4 506 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 RPGRIP1Q96KN7 1286 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 ZSWIM3Q96MP5 696 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 ASB2Q96Q27 587 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 PPP1R9BQ96SB3 815 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 CYP2S1Q96SQ9 504 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 NPY6RQ99463 290 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 DDX23Q9BUQ8 820 aaKnown RBP7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 PACSIN1Q9BY11 444 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 ZFP14Q9HCL3 533 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 UVRAGQ9P2Y5 699 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 MYO1AQ9UBC5 1043 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 RASAL2Q9UJF2 1139 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 NAALADL1Q9UQQ1 740 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 HBS1LQ9Y450 684 aaKnown RBP7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 CPQQ9Y646 472 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 F5P12259 2224 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 UNC80Q8N2C7 3258 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 SLC12A8A0AV02 714 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 C2CD4BA6NLJ0 364 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 LOC730098B7Z3J9 87 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 ANHXE9PGG2 379 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 M0QYT0 321 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 ECI2O75521 394 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 GJB6O95452 261 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 TRUB2O95900 331 aaKnown RBP7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 TBX18O95935 607 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 IGLV3-25P01717 112 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 IGLV3-27P01718 113 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 BMP1P13497 986 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 GPD1P21695 349 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 FCARP24071 287 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 RFC1P35251 1148 aaPredicted RBP7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 PTPN9P43378 593 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 SULT1E1P49888 294 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 VAV2P52735 878 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 RPL7AP62424 266 aaKnown RBP7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 ZP2Q05996 745 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 RING1Q06587 406 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 HTR4Q13639 388 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 TRIP4Q15650 581 aaPredicted RBP7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 SLC25A52Q3SY17 297 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 NUGGCQ68CJ6 796 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 TRNP1Q6NT89 227 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 STRADAQ7RTN6 431 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 PHLDB2Q86SQ0 1253 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 TAC4Q86UU9 113 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 MIB1Q86YT6 1006 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 KIAA1958Q8N8K9 716 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 ACRBPQ8NEB7 543 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 ZNF564Q8TBZ8 553 aaPredicted RBP7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 BPIFB1Q8TDL5 484 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 SH3RF2Q8TEC5 729 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 RXFP2Q8WXD0 754 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 FGF14Q92915 247 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 NT5C3BQ969T7 300 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 ELSPBP1Q96BH3 223 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 ARHGEF26Q96DR7 871 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 PGAP3Q96FM1 320 aaPredicted RBP7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 CFAP57Q96MR6 1250 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 NUP85Q9BW27 656 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 KLF16Q9BXK1 252 aaPredicted RBP7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 FAM204AQ9H8W3 233 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 DDIT4Q9NX09 232 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 SMPD4Q9NXE4 827 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 CTTNBP2NLQ9P2B4 639 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 IGSF9Q9P2J2 1179 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 SFMBT1Q9UHJ3 866 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 LCMT1Q9UIC8 334 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 ANAPC7Q9UJX3 599 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 CCL26Q9Y258 94 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 TLR6Q9Y2C9 796 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 SH3BP1Q9Y3L3 701 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 PAXBP1Q9Y5B6 917 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 PCDHA13Q9Y5I0 950 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms