RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 SYDE1Q6ZW31 735 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-228ENST00000511676 BHLHA9Q7RTU4 235 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 GPR149Q86SP6 731 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 MON1AQ86VX9 555 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 CEP57Q86XR8 500 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 NUP93Q8N1F7 819 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 ARFGAP1Q8N6T3 406 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 EMC1Q8N766 993 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 PDCD7Q8N8D1 485 aaKnown RBP9.48□□□□□ -0.89
NR1I3-228ENST00000511676 PDZD8Q8NEN9 1154 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 PRSS33Q8NF86 280 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 CCDC26Q8TAB7 109 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 BCL7CQ8WUZ0 217 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-228ENST00000511676 HNRNPLLQ8WVV9 542 aaKnown RBP9.48□□□□□ -0.89
NR1I3-228ENST00000511676 ANKRD7Q92527 254 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 PIWIL1Q96J94 861 aaKnown RBP9.48□□□□□ -0.89
NR1I3-228ENST00000511676 SLITRK1Q96PX8 696 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 CDK5RAP1Q96SZ6 601 aaKnown RBP9.48□□□□□ -0.89
NR1I3-228ENST00000511676 LPIN3Q9BQK8 851 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 ZNF670Q9BS34 389 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 TTLL2Q9BWV7 592 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 OSBPL8Q9BZF1 889 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 ULBP1Q9BZM6 244 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 ZBP1Q9H171 429 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 LRRC19Q9H756 370 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 PIDD1Q9HB75 910 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 ABCC13Q9NSE7 274 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 OLA1Q9NTK5 396 aaKnown RBP9.48□□□□□ -0.89
NR1I3-228ENST00000511676 RBM12Q9NTZ6 932 aaKnown RBP9.48□□□□□ -0.89
NR1I3-228ENST00000511676 TMEM30AQ9NV96 361 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 CLIC5Q9NZA1 410 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 LIMD1Q9UGP4 676 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 PCYOX1Q9UHG3 505 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 PTPRDP23468 1912 aa9.48□□□□□ -0.89
NR1I3-228ENST00000511676 hCG_1818297A0A087WSY0 165 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 HIDE1A8MVS5 230 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 NDC80O14777 642 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 ERLIN1O75477 346 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 ABLIM3O94929 683 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 GJB6O95452 261 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 TRUB2O95900 331 aaKnown RBP9.47□□□□□ -0.89
NR1I3-228ENST00000511676 GLUD1P00367 558 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 KRT1P04264 644 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 GRIK1P39086 918 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 CDKN2BP42772 138 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 PPP3CCP48454 512 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 CACNA2D1P54289 1103 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 HDAC4P56524 1084 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 PFKPQ01813 784 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 RAB33AQ14088 237 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 TFDP2Q14188 446 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 DPYSL2Q16555 572 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 CCNG2Q16589 344 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 ERCC6LQ2NKX8 1250 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 RARS2Q5T160 578 aaKnown RBP9.47□□□□□ -0.89
NR1I3-228ENST00000511676 MSANTD2Q6P1R3 559 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 SPOCD1Q6ZMY3 1216 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 BBS12Q6ZW61 710 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 CYP4V2Q6ZWL3 525 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-228ENST00000511676 PHLDB2Q86SQ0 1253 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 TMEM173Q86WV6 379 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-228ENST00000511676 NOA1Q8NC60 698 aaKnown RBP9.47□□□□□ -0.89
NR1I3-228ENST00000511676 ZNF461Q8TAF7 563 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 GRK7Q8WTQ7 553 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 FAM172AQ8WUF8 416 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 RIN2Q8WYP3 895 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-228ENST00000511676 FAM149B1Q96BN6 582 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 FAF2Q96CS3 445 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 MS4A14Q96JA4 679 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 CFAP57Q96MR6 1250 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 TMEM209Q96SK2 561 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 KCNK16Q96T55 309 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 NELL2Q99435 816 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 RXFP1Q9HBX9 757 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 ZDHHC7Q9NXF8 308 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 ABI2Q9NYB9 513 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-228ENST00000511676 STIM2Q9P246 746 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 DUSP12Q9UNI6 340 aa9.47□□□□□ -0.89
NR1I3-228ENST00000511676 LRRD1A4D1F6 860 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 C3orf70A6NLC5 250 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-228ENST00000511676 YJEFN3A6XGL0 299 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 C2CD4DB7Z1M9 353 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 BHMG1C9JSJ3 638 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-228ENST00000511676 E7ENQ6 273 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 H0Y858 1186 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 CAPN9O14815 690 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 IGLV3-25P01717 112 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 LMNAP02545 664 aaKnown RBP9.46□□□□□ -0.9
NR1I3-228ENST00000511676 SLC2A3P11169 496 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 ATF2P15336 505 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 H2AFXP16104 143 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-228ENST00000511676 ZFXP17010 805 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-228ENST00000511676 AOC1P19801 751 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 KDELR1P24390 212 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 CYP2F1P24903 491 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 IL1R2P27930 398 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 SSR1P43307 286 aaKnown RBP9.46□□□□□ -0.9
NR1I3-228ENST00000511676 DNA2P51530 1060 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 ARSEP51690 589 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 DRG2P55039 364 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms