RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 SOWAHCQ53LP3 525 aaPredicted RBP10.93□□□□□ -0.66
DDX41-211ENST00000510171 RESP18Q5W5W9 173 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 CEP135Q66GS9 1140 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 CCDC186Q7Z3E2 898 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 ANKS1BQ7Z6G8 1248 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 CEP57L1Q8IYX8 460 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 MDM1Q8TC05 714 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 RHBDD1Q8TEB9 315 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 HNRNPLLQ8WVV9 542 aaKnown RBP10.93□□□□□ -0.66
DDX41-211ENST00000510171 PIWIL1Q96J94 861 aaKnown RBP10.93□□□□□ -0.66
DDX41-211ENST00000510171 TWNKQ96RR1 684 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 DUSP16Q9BY84 665 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 SLC2A11Q9BYW1 496 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 IMPG2Q9BZV3 1241 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 CIPCQ9C0C6 399 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 EIF2B4Q9UI10 523 aaKnown RBP10.93□□□□□ -0.66
DDX41-211ENST00000510171 AGO1Q9UL18 857 aaKnown RBP10.93□□□□□ -0.66
DDX41-211ENST00000510171 STRIP2Q9ULQ0 834 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 PCDHA7Q9UN72 937 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 USP3Q9Y6I4 520 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 GON4LQ3T8J9 2241 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 MYO16Q9Y6X6 1858 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 PCNX2A6NKB5 2137 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 CACNA1EQ15878 2313 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 A0A1B0GVT2 93 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 PDXKO00764 312 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 FLRT2O43155 660 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 EPHX1P07099 455 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 ATXN1LP0C7T5 689 aaKnown RBP10.92□□□□□ -0.66
DDX41-211ENST00000510171 CD58P19256 250 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 PRKCHP24723 683 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 VAMP7P51809 220 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 BNC1Q01954 994 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 EFEMP1Q12805 493 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 FOXD4L6Q3SYB3 417 aaPredicted RBP10.92□□□□□ -0.66
DDX41-211ENST00000510171 SERPINA13PQ6UXR4 307 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 FOXD4L3Q6VB84 417 aaPredicted RBP10.92□□□□□ -0.66
DDX41-211ENST00000510171 DBX2Q6ZNG2 339 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 TMPRSS7Q7RTY8 843 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 FAM124AQ86V42 546 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 DENND1CQ8IV53 801 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 GRAMD1CQ8IYS0 662 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 ARHGAP18Q8N392 663 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 KIAA0895Q8NCT3 520 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 C1orf216Q8TAB5 229 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 DDI1Q8WTU0 396 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 SORCS1Q8WY21 1168 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 HEXIM2Q96MH2 286 aaKnown RBP10.92□□□□□ -0.66
DDX41-211ENST00000510171 PCED1AQ9H1Q7 454 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 KCTD10Q9H3F6 313 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 APOBEC3GQ9HC16 384 aaKnown RBP10.92□□□□□ -0.66
DDX41-211ENST00000510171 EXOC1Q9NV70 894 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 MARCH2Q9P0N8 246 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 RCOR1Q9UKL0 485 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 FNDC3AQ9Y2H6 1198 aaKnown RBP10.92□□□□□ -0.66
DDX41-211ENST00000510171 RAXQ9Y2V3 346 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 PCDHGB2Q9Y5G2 931 aa10.92□□□□□ -0.66
DDX41-211ENST00000510171 SPEGQ15772 3267 aa10.91□□□□□ -0.66
DDX41-211ENST00000510171 SLC12A8A0AV02 714 aa10.91□□□□□ -0.66
DDX41-211ENST00000510171 GOLGA8CPA6NN73 597 aa10.91□□□□□ -0.66
DDX41-211ENST00000510171 CALUO43852 315 aaPredicted RBP10.91□□□□□ -0.66
DDX41-211ENST00000510171 KLRC4O43908 158 aa10.91□□□□□ -0.66
DDX41-211ENST00000510171 SLFN14P0C7P3 912 aa10.91□□□□□ -0.66
DDX41-211ENST00000510171 CSNK1EP49674 416 aaKnown RBP10.91□□□□□ -0.66
DDX41-211ENST00000510171 AFF3P51826 1226 aaKnown RBP10.91□□□□□ -0.66
DDX41-211ENST00000510171 COPAP53621 1224 aa10.91□□□□□ -0.66
DDX41-211ENST00000510171 DNM1Q05193 864 aaKnown RBP10.91□□□□□ -0.66
DDX41-211ENST00000510171 TEAD4Q15561 434 aa10.91□□□□□ -0.66
DDX41-211ENST00000510171 KMT5BQ4FZB7 885 aa10.91□□□□□ -0.66
DDX41-211ENST00000510171 C1orf220Q5T0J3 134 aa10.91□□□□□ -0.66
DDX41-211ENST00000510171 PPP1R26Q5T8A7 1209 aaPredicted RBP10.91□□□□□ -0.66
DDX41-211ENST00000510171 RSRC2Q7L4I2 434 aaKnown RBP10.91□□□□□ -0.66
DDX41-211ENST00000510171 CACUL1Q86Y37 369 aa10.91□□□□□ -0.66
DDX41-211ENST00000510171 GALNT15Q8N3T1 639 aa10.91□□□□□ -0.66
DDX41-211ENST00000510171 CPXM2Q8N436 756 aa10.91□□□□□ -0.66
DDX41-211ENST00000510171 CCDC150Q8NCX0 1101 aa10.91□□□□□ -0.66
DDX41-211ENST00000510171 OR2T3Q8NH03 318 aa10.91□□□□□ -0.66
DDX41-211ENST00000510171 SNX19Q92543 992 aa10.91□□□□□ -0.66
DDX41-211ENST00000510171 PAGE5Q96GU1 130 aa10.91□□□□□ -0.66
DDX41-211ENST00000510171 UBXN6Q9BZV1 441 aa10.91□□□□□ -0.66
DDX41-211ENST00000510171 TOR4AQ9NXH8 423 aa10.91□□□□□ -0.66
DDX41-211ENST00000510171 USP25Q9UHP3 1055 aa10.91□□□□□ -0.66
DDX41-211ENST00000510171 SERTAD1Q9UHV2 236 aa10.91□□□□□ -0.66
DDX41-211ENST00000510171 CLEC4EQ9ULY5 219 aa10.91□□□□□ -0.66
DDX41-211ENST00000510171 PLA2G4CQ9UP65 541 aa10.91□□□□□ -0.66
DDX41-211ENST00000510171 PTPRDP23468 1912 aa10.91□□□□□ -0.66
DDX41-211ENST00000510171 HELZP42694 1942 aaKnown RBP10.91□□□□□ -0.66
DDX41-211ENST00000510171 ZZEF1O43149 2961 aa10.91□□□□□ -0.66
DDX41-211ENST00000510171 TRABD2BA6NFA1 517 aa10.9□□□□□ -0.66
DDX41-211ENST00000510171 DKK1O94907 266 aa10.9□□□□□ -0.66
DDX41-211ENST00000510171 MYL1P05976 194 aa10.9□□□□□ -0.66
DDX41-211ENST00000510171 GCLMP48507 274 aa10.9□□□□□ -0.66
DDX41-211ENST00000510171 YWHAGP61981 247 aaKnown RBP eCLIP10.9□□□□□ -0.66
DDX41-211ENST00000510171 CYP4F3Q08477 520 aa10.9□□□□□ -0.66
DDX41-211ENST00000510171 PKP1Q13835 747 aa10.9□□□□□ -0.66
DDX41-211ENST00000510171 KIF19Q2TAC6 998 aa10.9□□□□□ -0.66
DDX41-211ENST00000510171 MPPE1Q53F39 396 aa10.9□□□□□ -0.66
DDX41-211ENST00000510171 ZNF394Q53GI3 561 aa10.9□□□□□ -0.66
DDX41-211ENST00000510171 TMEM215Q68D42 235 aa10.9□□□□□ -0.66
DDX41-211ENST00000510171 RBBP8NLQ8NC74 664 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms