RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 IFNAR2P48551 515 aa15.43■□□□□ 0.06
RNF4-213ENST00000509388 SLC11A2P49281 568 aa15.43■□□□□ 0.06
RNF4-213ENST00000509388 PITX1P78337 314 aaPredicted RBP15.43■□□□□ 0.06
RNF4-213ENST00000509388 ZXDBP98169 803 aa15.43■□□□□ 0.06
RNF4-213ENST00000509388 RING1Q06587 406 aa15.43■□□□□ 0.06
RNF4-213ENST00000509388 MTA1Q13330 715 aa15.43■□□□□ 0.06
RNF4-213ENST00000509388 PIGHQ14442 188 aaPredicted RBP15.43■□□□□ 0.06
RNF4-213ENST00000509388 ZNF77Q15935 545 aa15.43■□□□□ 0.06
RNF4-213ENST00000509388 ARL13BQ3SXY8 428 aa15.43■□□□□ 0.06
RNF4-213ENST00000509388 ZC3H12AQ5D1E8 599 aaKnown RBP15.43■□□□□ 0.06
RNF4-213ENST00000509388 TRNP1Q6NT89 227 aa15.43■□□□□ 0.06
RNF4-213ENST00000509388 SCYL2Q6P3W7 929 aa15.43■□□□□ 0.06
RNF4-213ENST00000509388 VITQ6UXI7 678 aa15.43■□□□□ 0.06
RNF4-213ENST00000509388 STRADAQ7RTN6 431 aa15.43■□□□□ 0.06
RNF4-213ENST00000509388 DENND1CQ8IV53 801 aa15.43■□□□□ 0.06
RNF4-213ENST00000509388 ATP6V0D2Q8N8Y2 350 aa15.43■□□□□ 0.06
RNF4-213ENST00000509388 RSAD2Q8WXG1 361 aa15.43■□□□□ 0.06
RNF4-213ENST00000509388 PGAP3Q96FM1 320 aaPredicted RBP15.43■□□□□ 0.06
RNF4-213ENST00000509388 ZFRQ96KR1 1074 aaKnown RBP15.43■□□□□ 0.06
RNF4-213ENST00000509388 TFR2Q9UP52 801 aa15.43■□□□□ 0.06
RNF4-213ENST00000509388 REXO2Q9Y3B8 237 aaKnown RBP15.43■□□□□ 0.06
RNF4-213ENST00000509388 ADGRG1Q9Y653 693 aa15.43■□□□□ 0.06
RNF4-213ENST00000509388 CCP110O43303 1012 aa15.42■□□□□ 0.06
RNF4-213ENST00000509388 MOCS2O96007 188 aaPredicted RBP15.42■□□□□ 0.06
RNF4-213ENST00000509388 IGLV3-25P01717 112 aa15.42■□□□□ 0.06
RNF4-213ENST00000509388 TFE3P19532 575 aaPredicted RBP15.42■□□□□ 0.06
RNF4-213ENST00000509388 GDI1P31150 447 aa15.42■□□□□ 0.06
RNF4-213ENST00000509388 SSR1P43307 286 aaKnown RBP15.42■□□□□ 0.06
RNF4-213ENST00000509388 OGDHQ02218 1023 aa15.42■□□□□ 0.06
RNF4-213ENST00000509388 USP4Q13107 963 aa15.42■□□□□ 0.06
RNF4-213ENST00000509388 GRM2Q14416 872 aa15.42■□□□□ 0.06
RNF4-213ENST00000509388 PPP2R5DQ14738 602 aa15.42■□□□□ 0.06
RNF4-213ENST00000509388 ACAP1Q15027 740 aa15.42■□□□□ 0.06
RNF4-213ENST00000509388 IFI16Q16666 785 aaKnown RBP15.42■□□□□ 0.06
RNF4-213ENST00000509388 ARHGAP29Q52LW3 1261 aa15.42■□□□□ 0.06
RNF4-213ENST00000509388 BRMS1LQ5PSV4 323 aa15.42■□□□□ 0.06
RNF4-213ENST00000509388 HTR3DQ70Z44 454 aa15.42■□□□□ 0.06
RNF4-213ENST00000509388 GJD3Q8N144 294 aa15.42■□□□□ 0.06
RNF4-213ENST00000509388 KIAA1958Q8N8K9 716 aa15.42■□□□□ 0.06
RNF4-213ENST00000509388 RSPRY1Q96DX4 576 aa15.42■□□□□ 0.06
RNF4-213ENST00000509388 BTBD6Q96KE9 485 aa15.42■□□□□ 0.06
RNF4-213ENST00000509388 CALR3Q96L12 384 aaKnown RBP15.42■□□□□ 0.06
RNF4-213ENST00000509388 FCRL2Q96LA5 508 aaPredicted RBP15.42■□□□□ 0.06
RNF4-213ENST00000509388 DDX50Q9BQ39 737 aaKnown RBP15.42■□□□□ 0.06
RNF4-213ENST00000509388 RPP25Q9BUL9 199 aaKnown RBP15.42■□□□□ 0.06
RNF4-213ENST00000509388 PLA2G2FQ9BZM2 168 aa15.42■□□□□ 0.06
RNF4-213ENST00000509388 TSGA10Q9BZW7 698 aa15.42■□□□□ 0.06
RNF4-213ENST00000509388 BRD9Q9H8M2 597 aa15.42■□□□□ 0.06
RNF4-213ENST00000509388 OSGEPQ9NPF4 335 aa15.42■□□□□ 0.06
RNF4-213ENST00000509388 PIGVQ9NUD9 493 aa15.42■□□□□ 0.06
RNF4-213ENST00000509388 DUS2Q9NX74 493 aaKnown RBP15.42■□□□□ 0.06
RNF4-213ENST00000509388 NOTCH4Q99466 2003 aa15.42■□□□□ 0.06
RNF4-213ENST00000509388 MYO16Q9Y6X6 1858 aa15.42■□□□□ 0.06
RNF4-213ENST00000509388 A0A0A6YYK5 440 aaPredicted RBP15.41■□□□□ 0.06
RNF4-213ENST00000509388 TMEM110-MUSTN1A8MSY1 372 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 SCAMP3O14828 347 aaKnown RBP15.41■□□□□ 0.06
RNF4-213ENST00000509388 KRT86O43790 486 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 ENDOD1O94919 500 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 SLC34A2O95436 690 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 ASGR2P07307 311 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 CHKAP35790 457 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 ARHGAP25P42331 645 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 CXCR3P49682 368 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 TDGQ13569 410 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 MESDQ14696 234 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 TCEAL1Q15170 157 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 PDGFRLQ15198 375 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 SH3PXD2AQ5TCZ1 1133 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 FAM131BQ86XD5 332 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 SLC44A3Q8N4M1 653 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 ADAMTS19Q8TE59 1207 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 OSCP1Q8WVF1 389 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 CENPIQ92674 756 aaPredicted RBP15.41■□□□□ 0.06
RNF4-213ENST00000509388 IRF7Q92985 503 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 OTUB2Q96DC9 234 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 SLC39A13Q96H72 371 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 BTN2A3PQ96KV6 586 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 LRRC3BQ96PB8 259 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 TRIM7Q9C029 511 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 TKTL2Q9H0I9 626 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 AGO1Q9UL18 857 aaKnown RBP15.41■□□□□ 0.06
RNF4-213ENST00000509388 WNT6Q9Y6F9 365 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 DOCK6Q96HP0 2047 aa15.41■□□□□ 0.06
RNF4-213ENST00000509388 ZNF638Q14966 1978 aaKnown RBP15.4■□□□□ 0.06
RNF4-213ENST00000509388 C19orf67A6NJJ6 358 aa15.4■□□□□ 0.06
RNF4-213ENST00000509388 CHADO15335 359 aa15.4■□□□□ 0.06
RNF4-213ENST00000509388 PJA2O43164 708 aa15.4■□□□□ 0.06
RNF4-213ENST00000509388 PRPSAP2O60256 369 aa15.4■□□□□ 0.06
RNF4-213ENST00000509388 ACSL4O60488 711 aa15.4■□□□□ 0.06
RNF4-213ENST00000509388 MTA2O94776 668 aa15.4■□□□□ 0.06
RNF4-213ENST00000509388 LATS1O95835 1130 aa15.4■□□□□ 0.06
RNF4-213ENST00000509388 IGLV3-27P01718 113 aa15.4■□□□□ 0.06
RNF4-213ENST00000509388 ATXN1P54253 815 aaKnown RBP15.4■□□□□ 0.06
RNF4-213ENST00000509388 HDAC4P56524 1084 aa15.4■□□□□ 0.06
RNF4-213ENST00000509388 FCHO2Q0JRZ9 810 aa15.4■□□□□ 0.06
RNF4-213ENST00000509388 OTUD1Q5VV17 481 aaPredicted RBP15.4■□□□□ 0.06
RNF4-213ENST00000509388 BBS7Q8IWZ6 715 aa15.4■□□□□ 0.06
RNF4-213ENST00000509388 CSGALNACT1Q8TDX6 532 aa15.4■□□□□ 0.06
RNF4-213ENST00000509388 WBP2Q969T9 261 aa15.4■□□□□ 0.06
RNF4-213ENST00000509388 AZIN2Q96A70 460 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms