RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 VEPH1Q14D04 833 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 PPP1R7Q15435 360 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 DRICH1Q6PGQ1 229 aaPredicted RBP13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 CCNI2Q6ZMN8 369 aaPredicted RBP13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 SYDE1Q6ZW31 735 aaPredicted RBP13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 TMC7Q7Z402 723 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 PYROXD2Q8N2H3 581 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 ATL2Q8NHH9 583 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 CASKIN2Q8WXE0 1202 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 IFT81Q8WYA0 676 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 SLCO2A1Q92959 643 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 SERPINB11Q96P15 392 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 CSPG4P5Q96PW8 444 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 TTLL2Q9BWV7 592 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 WDCPQ9H6R7 721 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 TMEM51Q9NW97 253 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 MTMR10Q9NXD2 777 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 MAFFQ9ULX9 164 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 MAGED2Q9UNF1 606 aaPredicted RBP13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 LZTS1Q9Y250 596 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 LINC01553A4QN01 128 aa13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 H3BRJ5 948 aa13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 CSH1P0DML2 217 aa13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 CSH2P0DML3 217 aa13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 RARGP13631 454 aa13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 ZFXP17010 805 aaPredicted RBP13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 VCPP55072 806 aaKnown RBP13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 OTUD4Q01804 1114 aaKnown RBP13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 LMNB2Q03252 620 aa13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 TERF2Q15554 542 aa13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 BRMS1LQ5PSV4 323 aa13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 MSANTD2Q6P1R3 559 aa13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 HDXQ7Z353 690 aa13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 GSPT2Q8IYD1 628 aaKnown RBP13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 PCDH19Q8TAB3 1148 aa13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 ACTL9Q8TC94 416 aa13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 CASP10Q92851 521 aa13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 NKD2Q969F2 451 aaPredicted RBP13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 ERP44Q9BS26 406 aa13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 TRIM31Q9BZY9 425 aa13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 TKTL2Q9H0I9 626 aa13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 ENTPD7Q9NQZ7 604 aa13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 TMPRSS4Q9NRS4 437 aa13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 OLA1Q9NTK5 396 aaKnown RBP13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 CLIC5Q9NZA1 410 aa13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 SFMBT1Q9UHJ3 866 aa13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 NUDT5Q9UKK9 219 aa13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 DNPEPQ9ULA0 475 aa13.08□□□□□ -0.32
LYSMD3-204ENST00000509384 BHMG1C9JSJ3 638 aaPredicted RBP13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 MCF2LO15068 1137 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 MSI1O43347 362 aaKnown RBP13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 CXCL14O95715 111 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 CNPP09543 421 aaKnown RBP13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 MYBL2P10244 700 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 GOT1P17174 413 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 TGM2P21980 687 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 CCR1P32246 355 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 CARSP49589 748 aaKnown RBP13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 TWF1Q12792 350 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 CUL1Q13616 776 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 TAF12Q16514 161 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 KCTD19Q17RG1 926 aaPredicted RBP13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 DUPD1Q68J44 220 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 SLC9A4Q6AI14 798 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 C1orf228Q6PIY5 440 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 GSTA5Q7RTV2 222 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 TCEAL8Q8IYN2 117 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 PQLC3Q8N755 202 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 PDZD8Q8NEN9 1154 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 OVCA2Q8WZ82 227 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 SEC14L1Q92503 715 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 P3H4Q92791 437 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 TCF25Q9BQ70 676 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 EMILIN2Q9BXX0 1053 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 MAGEB5Q9BZ81 275 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 DPH5Q9H2P9 285 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 FAM114A2Q9NRY5 505 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 CWC15Q9P013 229 aaKnown RBP13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 SAE1Q9UBE0 346 aaPredicted RBP13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 ZNF148Q9UQR1 794 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 NR2E3Q9Y5X4 410 aa13.07□□□□□ -0.32
LYSMD3-204ENST00000509384 EEF2KO00418 725 aaKnown RBP13.06□□□□□ -0.32
LYSMD3-204ENST00000509384 MAP2K7O14733 419 aa13.06□□□□□ -0.32
LYSMD3-204ENST00000509384 DAPK3O43293 454 aa13.06□□□□□ -0.32
LYSMD3-204ENST00000509384 CREB3O43889 395 aa13.06□□□□□ -0.32
LYSMD3-204ENST00000509384 SEC31AO94979 1220 aaKnown RBP13.06□□□□□ -0.32
LYSMD3-204ENST00000509384 ADH1AP07327 375 aa13.06□□□□□ -0.32
LYSMD3-204ENST00000509384 ZDHHC11BP0C7U3 371 aa13.06□□□□□ -0.32
LYSMD3-204ENST00000509384 PECAM1P16284 738 aaPredicted RBP13.06□□□□□ -0.32
LYSMD3-204ENST00000509384 MAGEA10P43363 369 aaPredicted RBP13.06□□□□□ -0.32
LYSMD3-204ENST00000509384 EPHB3P54753 998 aa13.06□□□□□ -0.32
LYSMD3-204ENST00000509384 EIF4EBP2Q13542 120 aaPredicted RBP13.06□□□□□ -0.32
LYSMD3-204ENST00000509384 PTK6Q13882 451 aa13.06□□□□□ -0.32
LYSMD3-204ENST00000509384 HLTFQ14527 1009 aaKnown RBP eCLIP13.06□□□□□ -0.32
LYSMD3-204ENST00000509384 NOMO1Q15155 1222 aa13.06□□□□□ -0.32
LYSMD3-204ENST00000509384 OASLQ15646 514 aaKnown RBP13.06□□□□□ -0.32
LYSMD3-204ENST00000509384 C10orf120Q5SQS8 335 aa13.06□□□□□ -0.32
LYSMD3-204ENST00000509384 C9orf50Q5SZB4 431 aa13.06□□□□□ -0.32
LYSMD3-204ENST00000509384 NPNTQ6UXI9 565 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms