RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 SPRY2O43597 315 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 GAS8-AS1O95177 125 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 FGF2P09038 288 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 SLC5A1P13866 664 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 TNFRSF1BP20333 461 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 TM4SF4P48230 202 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 PRKAG1P54619 331 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 ICA1Q05084 483 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 PPFIA1Q13136 1202 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 CCNIQ14094 377 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 FGL2Q14314 439 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 ZNF267Q14586 743 aaPredicted RBP2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 KIAA0753Q2KHM9 967 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 DGKKQ5KSL6 1271 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 LMBRD2Q68DH5 695 aaPredicted RBP2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 FAAH2Q6GMR7 532 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 MZT2BQ6NZ67 158 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 PGBD2Q6P3X8 592 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 UBE2Q1Q7Z7E8 422 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 DCP1BQ8IZD4 617 aaKnown RBP2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 MAFAQ8NHW3 353 aaPredicted RBP2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 PARD3BQ8TEW8 1205 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 DIS3LQ8TF46 1054 aaKnown RBP2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 MAML1Q92585 1016 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 WDYHV1Q96HA8 205 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 TTC14Q96N46 770 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 NEUROD6Q96NK8 337 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 NT5C1BQ96P26 610 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 TAAR9Q96RI9 348 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 TRIM5Q9C035 493 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 MS4A7Q9GZW8 240 aaPredicted RBP2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 RSPH9Q9H1X1 276 aaPredicted RBP2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 TMEM60Q9H2L4 133 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 XPNPEP3Q9NQH7 507 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 POT1Q9NUX5 634 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 DNMT3BQ9UBC3 853 aaKnown RBP2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 PI4KBQ9UBF8 816 aa2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 LRRFIP2Q9Y608 721 aaKnown RBP2.75□□□□□ -1.97
DEPDC1B-204ENST00000509006 DYTNA2CJ06 578 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 RASA4BC9J798 803 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 H3BML4 177 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 PSMD9O00233 223 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 BTN3A1O00481 513 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 RASA4O43374 803 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 PIP5K1CO60331 668 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 RNF8O76064 485 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 SERPINB3P29508 390 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 CDKN2AP42771 156 aaKnown RBP2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 COPB1P53618 953 aaKnown RBP2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 TIRAPP58753 221 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 RPS13P62277 151 aaKnown RBP2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 TIAL1Q01085 375 aaKnown RBP eCLIP2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 NUCB1Q02818 461 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 PRKG2Q13237 762 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 BLMHQ13867 455 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 TRIM14Q14142 442 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 SIM2Q14190 667 aaPredicted RBP2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 MYBPC2Q14324 1141 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 NPY5RQ15761 445 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 TAF12Q16514 161 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 TMEM63BQ5T3F8 832 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 XRRA1Q6P2D8 792 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 TLDC1Q6P9B6 456 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 TMEM65Q6PI78 240 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 RANBP10Q6VN20 620 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 ZNF783Q6ZMS7 281 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 DCDC5Q6ZRR9 648 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 KRT77Q7Z794 578 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 RAB11FIP4Q86YS3 637 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 DENND1CQ8IV53 801 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 GRAMD1CQ8IYS0 662 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 CLASRPQ8N2M8 674 aaKnown RBP2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 ARFGAP1Q8N6T3 406 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 RAPGEF4Q8WZA2 1011 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 NAP1L5Q96NT1 182 aaPredicted RBP2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 VN1R3Q9BXE9 311 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 SLCO5A1Q9H2Y9 848 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 CNNM1Q9NRU3 951 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 HELLSQ9NRZ9 838 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 DDX20Q9UHI6 824 aaKnown RBP2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 HDAC9Q9UKV0 1011 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 CEP83Q9Y592 693 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 HS3ST3B1Q9Y662 390 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 CDY1Q9Y6F8 540 aa2.74□□□□□ -1.97
DEPDC1B-204ENST00000509006 CAPN8A6NHC0 703 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 C4orf47A7E2U8 309 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 KRTAP9-6A8MVA2 160 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 B4DGG1 531 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 J3KRW8 73 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 K7ENM7 598 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 CD3EAPO15446 510 aaKnown RBP2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 IRAK2O43187 625 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 TMPRSS11DO60235 418 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 UBXN7O94888 489 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 T-ENOLP0DO92 83 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 EN2P19622 333 aaPredicted RBP2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 EPHA3P29320 983 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms