RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 CDH7Q9ULB5 785 aa9□□□□□ -0.97
USP46-207ENST00000508499 PYCARDQ9ULZ3 195 aa9□□□□□ -0.97
USP46-207ENST00000508499 NAALADL1Q9UQQ1 740 aa9□□□□□ -0.97
USP46-207ENST00000508499 MRPS23Q9Y3D9 190 aaKnown RBP9□□□□□ -0.97
USP46-207ENST00000508499 DUSP10Q9Y6W6 482 aa9□□□□□ -0.97
USP46-207ENST00000508499 EYSQ5T1H1 3165 aa9□□□□□ -0.97
USP46-207ENST00000508499 XIRP2A4UGR9 3374 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 C2orf78A6NCI8 922 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 KCNU1A8MYU2 1149 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 ZNF487B1APH4 448 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 MDM4O15151 490 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 MBTPS2O43462 519 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 GREM1O60565 184 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 LRCH4O75427 683 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 GRAP2O75791 330 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 RNF8O76064 485 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 TUBB4AP04350 444 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 RDXP35241 583 aaKnown RBP8.99□□□□□ -0.97
USP46-207ENST00000508499 HDAC4P56524 1084 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 IFRD2Q12894 506 aaPredicted RBP8.99□□□□□ -0.97
USP46-207ENST00000508499 TEAD2Q15562 447 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 NUGGCQ68CJ6 796 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 TXNDC8Q6A555 127 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 HTR3DQ70Z44 454 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 RSRC2Q7L4I2 434 aaKnown RBP8.99□□□□□ -0.97
USP46-207ENST00000508499 UNC45BQ8IWX7 931 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 FAM217AQ8IXS0 508 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 ARFGAP1Q8N6T3 406 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 EMC1Q8N766 993 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 FAM71BQ8TC56 605 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 TEKT4Q8WW24 435 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 EDEM1Q92611 657 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 FGF13Q92913 245 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 CD101Q93033 1021 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 NXPE3Q969Y0 559 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 OTUB2Q96DC9 234 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 TCEAL4Q96EI5 215 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 CFAP57Q96MR6 1250 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 ASB16Q96NS5 453 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 ADAM33Q9BZ11 813 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 TDP1Q9NUW8 608 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 ARHGEF38Q9NXL2 777 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 FAM50BQ9Y247 325 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 ZNF510Q9Y2H8 683 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 USP15Q9Y4E8 981 aaPredicted RBP8.99□□□□□ -0.97
USP46-207ENST00000508499 COL4A2P08572 1712 aa8.99□□□□□ -0.97
USP46-207ENST00000508499 E2F8A0AVK6 867 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 MIF4GDA9UHW6 222 aaKnown RBP8.98□□□□□ -0.97
USP46-207ENST00000508499 M0QYT0 321 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 NRG2O14511 850 aaPredicted RBP8.98□□□□□ -0.97
USP46-207ENST00000508499 BUB1BO60566 1050 aaPredicted RBP8.98□□□□□ -0.97
USP46-207ENST00000508499 ABL1P00519 1130 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 LAMP2P13473 410 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 CEBPBP17676 345 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 PSMA2P25787 234 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 MSNP26038 577 aaKnown RBP8.98□□□□□ -0.97
USP46-207ENST00000508499 CCR1P32246 355 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 HTR7P34969 479 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 AVPR1AP37288 418 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 RNASE9P60153 205 aaKnown RBP8.98□□□□□ -0.97
USP46-207ENST00000508499 NTHL1P78549 312 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 CYP4F8P98187 520 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 SLC25A11Q02978 314 aaKnown RBP8.98□□□□□ -0.97
USP46-207ENST00000508499 USP4Q13107 963 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 BOLA3Q53S33 107 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 C10orf120Q5SQS8 335 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 GPR158Q5T848 1215 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 THSD4Q6ZMP0 1018 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 Q6ZNB5 142 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 CYP4V2Q6ZWL3 525 aaPredicted RBP8.98□□□□□ -0.97
USP46-207ENST00000508499 SND1Q7KZF4 910 aaKnown RBP eCLIP8.98□□□□□ -0.97
USP46-207ENST00000508499 OTOP3Q7RTS5 596 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 TAC4Q86UU9 113 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 CELF5Q8N6W0 485 aaKnown RBP8.98□□□□□ -0.97
USP46-207ENST00000508499 MAB21L3Q8N8X9 362 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 ITFG1Q8TB96 612 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 ADAMTS19Q8TE59 1207 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 FAM172AQ8WUF8 416 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 SMARCD2Q92925 531 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 FCRL2Q96LA5 508 aaPredicted RBP8.98□□□□□ -0.97
USP46-207ENST00000508499 C1orf74Q96LT6 269 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 ALS2CR12Q96Q35 445 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 SLC22A12Q96S37 553 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 HAPLN3Q96S86 360 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 TRIM7Q9C029 511 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 DCLK3Q9C098 648 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 POMKQ9H5K3 350 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 PIGVQ9NUD9 493 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 DDIT4Q9NX09 232 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 CALCOCO1Q9P1Z2 691 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 VPS9D1Q9Y2B5 631 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 ALG6Q9Y672 507 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 KIAA1549LQ6ZVL6 1849 aa8.98□□□□□ -0.97
USP46-207ENST00000508499 A0A0U1RQJ8 604 aa8.97□□□□□ -0.97
USP46-207ENST00000508499 CCDC66A2RUB6 948 aa8.97□□□□□ -0.97
USP46-207ENST00000508499 GRID2IPA4D2P6 1211 aa8.97□□□□□ -0.97
USP46-207ENST00000508499 GRXCR2A6NFK2 248 aa8.97□□□□□ -0.97
USP46-207ENST00000508499 ANHXE9PGG2 379 aa8.97□□□□□ -0.97
USP46-207ENST00000508499 GFRA2O00451 464 aa8.97□□□□□ -0.97
USP46-207ENST00000508499 PSTPIP1O43586 416 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms