RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, human

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-208	ENST00000506971	CCDC149	Q6ZUS6	474 aa		4.88	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	ANKRD18A	Q8IVF6	992 aa		4.88	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	KRT78	Q8N1N4	520 aa		4.88	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	OR2C3	Q8N628	320 aa		4.88	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	SLC15A4	Q8N697	577 aa		4.88	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	PNLDC1	Q8NA58	520 aa	Known RBP	4.88	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	FAM156A	Q8NDB6	213 aa		4.88	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	DIS3L	Q8TF46	1054 aa	Known RBP	4.88	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	ATG4A	Q8WYN0	398 aa		4.88	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	RAPGEF4	Q8WZA2	1011 aa		4.88	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	ACO2	Q99798	780 aa	Known RBP	4.88	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	EIF2AK1	Q9BQI3	630 aa	Known RBP	4.88	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	PTDSS2	Q9BVG9	487 aa		4.88	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	OSBPL5	Q9H0X9	879 aa	Predicted RBP	4.88	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	4.88	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	TMEM60	Q9H2L4	133 aa		4.88	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	SHOC2	Q9UQ13	582 aa		4.88	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	FAM135B	Q49AJ0	1406 aa		4.88	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	NLRP1	Q9C000	1473 aa		4.88	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	NRK	Q7Z2Y5	1582 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971		A0A1W2PPL8	197 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971		A1L4Q6	167 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	LINC01548	A6NM66	108 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	EXOC3	O60645	756 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	MBD4	O95243	580 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	IL6R	P08887	468 aa	Predicted RBP	4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	PRR35	P0CG20	571 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	KIT	P10721	976 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	CDC37	Q16543	378 aa	Predicted RBP	4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	KIAA1614	Q5VZ46	1190 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	GGT6	Q6P531	493 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	BRINP3	Q76B58	766 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	OVCH2	Q7RTZ1	564 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	ZNF804A	Q7Z570	1209 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	DPP9	Q86TI2	863 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	GLCCI1	Q86VQ1	547 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	SLC15A3	Q8IY34	581 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	TTC30B	Q8N4P2	665 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	C1GALT1C1	Q96EU7	318 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	NAF1	Q96HR8	494 aa	Known RBP	4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	ZNF778	Q96MU6	729 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	MACROD1	Q9BQ69	325 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	UPF2	Q9HAU5	1272 aa	Known RBP	4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	ZSCAN32	Q9NX65	697 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	RRN3	Q9NYV6	651 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	SERGEF	Q9UGK8	458 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	NDRG4	Q9ULP0	352 aa	Known RBP	4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	TTLL3	Q9Y4R7	772 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971		A0A1W2PP64	1363 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	PNPLA6	Q8IY17	1366 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	DIP2A	Q14689	1571 aa		4.87	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	NRXN3	Q9Y4C0	1643 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	C3	P01024	1663 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	TOPAZ1	Q8N9V7	1692 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	KIF13A	Q9H1H9	1805 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971		A6NCN8	305 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971		H3BML4	177 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	TUSC2	O75896	110 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	CELA2A	P08217	269 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	NPS	P0C0P6	89 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	CAPN3	P20807	821 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	KEL	P23276	732 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	HTR1B	P28222	390 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	ADORA2A	P29274	412 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	IL6ST	P40189	918 aa	Predicted RBP	4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	ATXN1	P54253	815 aa	Known RBP	4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	TPTE	P56180	551 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	KIAA0753	Q2KHM9	967 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	AARS2	Q5JTZ9	985 aa	Known RBP	4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	FAAH2	Q6GMR7	532 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	FAM180B	Q6P0A1	224 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	ANKRD16	Q6P6B7	361 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	DARS2	Q6PI48	645 aa	Known RBP	4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	SERPINA13P	Q6UXR4	307 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	GET4	Q7L5D6	327 aa	Predicted RBP	4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	YTHDF3	Q7Z739	585 aa	Known RBP	4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	DTX2	Q86UW9	622 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	ZNF280B	Q86YH2	543 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	CREBRF	Q8IUR6	639 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	OR8H2	Q8N162	312 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	MYCT1	Q8N699	235 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	DNAJC5G	Q8N7S2	189 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	SEMA6D	Q8NFY4	1073 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	PLBD2	Q8NHP8	589 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	PPP1R35	Q8TAP8	253 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	ZBTB10	Q96DT7	871 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	RIPOR3	Q96MK2	946 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	NT5C1B	Q96P26	610 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	TBCB	Q99426	244 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	LRRC27	Q9C0I9	530 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	PIH1D1	Q9NWS0	290 aa	Known RBP	4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	DLL3	Q9NYJ7	618 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	TPCN1	Q9ULQ1	816 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	SSX2IP	Q9Y2D8	614 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	AFG3L2	Q9Y4W6	797 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	PCDHGB6	Q9Y5F9	930 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	KIF16B	Q96L93	1317 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	EDC4	Q6P2E9	1401 aa	Known RBP	4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	YEATS2	Q9ULM3	1422 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms