RNA–Protein interactions for RNA: ENST00000506197.2

SMIM20-201, Transcript of small integral membrane protein 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM20, Length 935 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-201ENST00000506197 TBCBQ99426 244 aa20.92■□□□□ 0.94
SMIM20-201ENST00000506197 SLC46A2Q9BY10 475 aa20.92■□□□□ 0.94
SMIM20-201ENST00000506197 TRIM7Q9C029 511 aa20.92■□□□□ 0.94
SMIM20-201ENST00000506197 DDIT4Q9NX09 232 aa20.92■□□□□ 0.94
SMIM20-201ENST00000506197 COX16Q9P0S2 106 aa20.92■□□□□ 0.94
SMIM20-201ENST00000506197 TRIM10Q9UDY6 481 aa20.92■□□□□ 0.94
SMIM20-201ENST00000506197 SFMBT1Q9UHJ3 866 aa20.92■□□□□ 0.94
SMIM20-201ENST00000506197 GUCA1BQ9UMX6 200 aa20.92■□□□□ 0.94
SMIM20-201ENST00000506197 DUSP10Q9Y6W6 482 aa20.92■□□□□ 0.94
SMIM20-201ENST00000506197 GOLGA6L9A6NEM1 432 aa20.91■□□□□ 0.94
SMIM20-201ENST00000506197 TMEM110-MUSTN1A8MSY1 372 aa20.91■□□□□ 0.94
SMIM20-201ENST00000506197 RNF8O76064 485 aa20.91■□□□□ 0.94
SMIM20-201ENST00000506197 DEKP35659 375 aaKnown RBP20.91■□□□□ 0.94
SMIM20-201ENST00000506197 ARHGAP25P42331 645 aa20.91■□□□□ 0.94
SMIM20-201ENST00000506197 KPNA1P52294 538 aaPredicted RBP20.91■□□□□ 0.94
SMIM20-201ENST00000506197 OGDHQ02218 1023 aa20.91■□□□□ 0.94
SMIM20-201ENST00000506197 DEUP1Q05D60 604 aa20.91■□□□□ 0.94
SMIM20-201ENST00000506197 NME3Q13232 169 aa20.91■□□□□ 0.94
SMIM20-201ENST00000506197 PIGHQ14442 188 aaPredicted RBP20.91■□□□□ 0.94
SMIM20-201ENST00000506197 MESDQ14696 234 aa20.91■□□□□ 0.94
SMIM20-201ENST00000506197 C15orf59Q2T9L4 293 aaPredicted RBP20.91■□□□□ 0.94
SMIM20-201ENST00000506197 IER5LQ5T953 404 aa20.91■□□□□ 0.94
SMIM20-201ENST00000506197 NPAS3Q8IXF0 933 aa20.91■□□□□ 0.94
SMIM20-201ENST00000506197 CMTM8Q8IZV2 173 aa20.91■□□□□ 0.94
SMIM20-201ENST00000506197 RNF10Q8N5U6 811 aaKnown RBP20.91■□□□□ 0.94
SMIM20-201ENST00000506197 PRSS33Q8NF86 280 aa20.91■□□□□ 0.94
SMIM20-201ENST00000506197 FAM172AQ8WUF8 416 aa20.91■□□□□ 0.94
SMIM20-201ENST00000506197 FGF13Q92913 245 aa20.91■□□□□ 0.94
SMIM20-201ENST00000506197 CYP2S1Q96SQ9 504 aa20.91■□□□□ 0.94
SMIM20-201ENST00000506197 PRRX2Q99811 253 aa20.91■□□□□ 0.94
SMIM20-201ENST00000506197 RNF38Q9H0F5 515 aa20.91■□□□□ 0.94
SMIM20-201ENST00000506197 TMEM51Q9NW97 253 aa20.91■□□□□ 0.94
SMIM20-201ENST00000506197 TRMT1Q9NXH9 659 aaKnown RBP20.91■□□□□ 0.94
SMIM20-201ENST00000506197 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.91■□□□□ 0.94
SMIM20-201ENST00000506197 GDE1Q9NZC3 331 aa20.91■□□□□ 0.94
SMIM20-201ENST00000506197 CDH7Q9ULB5 785 aa20.91■□□□□ 0.94
SMIM20-201ENST00000506197 SLC12A8A0AV02 714 aa20.9■□□□□ 0.94
SMIM20-201ENST00000506197 OLFM2O95897 454 aa20.9■□□□□ 0.94
SMIM20-201ENST00000506197 F9P00740 461 aa20.9■□□□□ 0.94
SMIM20-201ENST00000506197 PITX1P78337 314 aaPredicted RBP20.9■□□□□ 0.94
SMIM20-201ENST00000506197 TDGQ13569 410 aa20.9■□□□□ 0.94
SMIM20-201ENST00000506197 ACAP1Q15027 740 aa20.9■□□□□ 0.94
SMIM20-201ENST00000506197 STRADAQ7RTN6 431 aa20.9■□□□□ 0.94
SMIM20-201ENST00000506197 NT5C3BQ969T7 300 aa20.9■□□□□ 0.94
SMIM20-201ENST00000506197 SLC22A12Q96S37 553 aa20.9■□□□□ 0.94
SMIM20-201ENST00000506197 MYADMQ96S97 322 aa20.9■□□□□ 0.94
SMIM20-201ENST00000506197 NCAPGQ9BPX3 1015 aa20.9■□□□□ 0.94
SMIM20-201ENST00000506197 KCNK12Q9HB15 430 aa20.9■□□□□ 0.94
SMIM20-201ENST00000506197 IGSF9Q9P2J2 1179 aa20.9■□□□□ 0.94
SMIM20-201ENST00000506197 EPS15L1Q9UBC2 864 aa20.9■□□□□ 0.94
SMIM20-201ENST00000506197 SALL4Q9UJQ4 1053 aa20.9■□□□□ 0.94
SMIM20-201ENST00000506197 HBS1LQ9Y450 684 aaKnown RBP20.9■□□□□ 0.94
SMIM20-201ENST00000506197 PAXBP1Q9Y5B6 917 aa20.9■□□□□ 0.94
SMIM20-201ENST00000506197 CPQQ9Y646 472 aa20.9■□□□□ 0.94
SMIM20-201ENST00000506197 IRAK2O43187 625 aa20.89■□□□□ 0.93
SMIM20-201ENST00000506197 MSI1O43347 362 aaKnown RBP20.89■□□□□ 0.93
SMIM20-201ENST00000506197 PROSCO94903 275 aa20.89■□□□□ 0.93
SMIM20-201ENST00000506197 AVPR2P30518 371 aa20.89■□□□□ 0.93
SMIM20-201ENST00000506197 RDXP35241 583 aaKnown RBP20.89■□□□□ 0.93
SMIM20-201ENST00000506197 TBX4P57082 545 aa20.89■□□□□ 0.93
SMIM20-201ENST00000506197 SLC7A9P82251 487 aa20.89■□□□□ 0.93
SMIM20-201ENST00000506197 COG7P83436 770 aa20.89■□□□□ 0.93
SMIM20-201ENST00000506197 ZNF252P-AS1Q0IIN9 211 aa20.89■□□□□ 0.93
SMIM20-201ENST00000506197 NNTQ13423 1086 aa20.89■□□□□ 0.93
SMIM20-201ENST00000506197 TRIP4Q15650 581 aaPredicted RBP20.89■□□□□ 0.93
SMIM20-201ENST00000506197 CCAR2Q8N163 923 aaKnown RBP20.89■□□□□ 0.93
SMIM20-201ENST00000506197 NIPA2Q8N8Q9 360 aa20.89■□□□□ 0.93
SMIM20-201ENST00000506197 TPCN2Q8NHX9 752 aa20.89■□□□□ 0.93
SMIM20-201ENST00000506197 ZSCAN18Q8TBC5 510 aaPredicted RBP20.89■□□□□ 0.93
SMIM20-201ENST00000506197 RNF34Q969K3 372 aa20.89■□□□□ 0.93
SMIM20-201ENST00000506197 PGAP3Q96FM1 320 aaPredicted RBP20.89■□□□□ 0.93
SMIM20-201ENST00000506197 SMPD4Q9NXE4 827 aa20.89■□□□□ 0.93
SMIM20-201ENST00000506197 DUSP12Q9UNI6 340 aa20.89■□□□□ 0.93
SMIM20-201ENST00000506197 TLR6Q9Y2C9 796 aa20.89■□□□□ 0.93
SMIM20-201ENST00000506197 ZFP37Q9Y6Q3 630 aaPredicted RBP20.89■□□□□ 0.93
SMIM20-201ENST00000506197 MOCS3O95396 460 aa20.88■□□□□ 0.93
SMIM20-201ENST00000506197 IGLV3-25P01717 112 aa20.88■□□□□ 0.93
SMIM20-201ENST00000506197 HMBSP08397 361 aa20.88■□□□□ 0.93
SMIM20-201ENST00000506197 TFE3P19532 575 aaPredicted RBP20.88■□□□□ 0.93
SMIM20-201ENST00000506197 MAN1A1P33908 653 aa20.88■□□□□ 0.93
SMIM20-201ENST00000506197 PTPN5P54829 565 aa20.88■□□□□ 0.93
SMIM20-201ENST00000506197 OTUD1Q5VV17 481 aaPredicted RBP20.88■□□□□ 0.93
SMIM20-201ENST00000506197 DAAM2Q86T65 1068 aa20.88■□□□□ 0.93
SMIM20-201ENST00000506197 DDX42Q86XP3 938 aaKnown RBP eCLIP20.88■□□□□ 0.93
SMIM20-201ENST00000506197 REXO1L1PQ8IX06 675 aa20.88■□□□□ 0.93
SMIM20-201ENST00000506197 CENPIQ92674 756 aaPredicted RBP20.88■□□□□ 0.93
SMIM20-201ENST00000506197 PLD4Q96BZ4 506 aa20.88■□□□□ 0.93
SMIM20-201ENST00000506197 ZSWIM3Q96MP5 696 aa20.88■□□□□ 0.93
SMIM20-201ENST00000506197 ARHGAP26Q9UNA1 814 aa20.88■□□□□ 0.93
SMIM20-201ENST00000506197 ZKSCAN5Q9Y2L8 839 aa20.88■□□□□ 0.93
SMIM20-201ENST00000506197 BUB1BO60566 1050 aaPredicted RBP20.87■□□□□ 0.93
SMIM20-201ENST00000506197 ENDOD1O94919 500 aa20.87■□□□□ 0.93
SMIM20-201ENST00000506197 IRF1P10914 325 aa20.87■□□□□ 0.93
SMIM20-201ENST00000506197 SLC2A3P11169 496 aa20.87■□□□□ 0.93
SMIM20-201ENST00000506197 SSR1P43307 286 aaKnown RBP20.87■□□□□ 0.93
SMIM20-201ENST00000506197 SH3PXD2AQ5TCZ1 1133 aa20.87■□□□□ 0.93
SMIM20-201ENST00000506197 C11orf63Q6NUN7 778 aa20.87■□□□□ 0.93
SMIM20-201ENST00000506197 SCYL2Q6P3W7 929 aa20.87■□□□□ 0.93
SMIM20-201ENST00000506197 ARID3BQ8IVW6 561 aaPredicted RBP20.87■□□□□ 0.93
SMIM20-201ENST00000506197 SYCE1Q8N0S2 351 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms