RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 TCRBV21S2A2A0A5A6 115 aa17.5■□□□□ 0.39
PDLIM7-215ENST00000506161 GNA14O95837 355 aa17.5■□□□□ 0.39
PDLIM7-215ENST00000506161 PNMA6AP0CW24 399 aaPredicted RBP17.5■□□□□ 0.39
PDLIM7-215ENST00000506161 GABRG2P18507 467 aa17.5■□□□□ 0.39
PDLIM7-215ENST00000506161 HSP90AA4PQ58FG1 418 aa17.5■□□□□ 0.39
PDLIM7-215ENST00000506161 TRIM65Q6PJ69 517 aa17.5■□□□□ 0.39
PDLIM7-215ENST00000506161 RSRC2Q7L4I2 434 aaKnown RBP17.5■□□□□ 0.39
PDLIM7-215ENST00000506161 HMGB4Q8WW32 186 aa17.5■□□□□ 0.39
PDLIM7-215ENST00000506161 PIWIL1Q96J94 861 aaKnown RBP17.5■□□□□ 0.39
PDLIM7-215ENST00000506161 UBE2TQ9NPD8 197 aaPredicted RBP17.5■□□□□ 0.39
PDLIM7-215ENST00000506161 LMBRD1Q9NUN5 540 aa17.5■□□□□ 0.39
PDLIM7-215ENST00000506161 STARD13Q9Y3M8 1113 aa17.5■□□□□ 0.39
PDLIM7-215ENST00000506161 RAD54BQ9Y620 910 aa17.5■□□□□ 0.39
PDLIM7-215ENST00000506161 PI4KAP42356 2102 aa17.5■□□□□ 0.39
PDLIM7-215ENST00000506161 ATRXP46100 2492 aa17.49■□□□□ 0.39
PDLIM7-215ENST00000506161 TSPAN3O60637 253 aa17.49■□□□□ 0.39
PDLIM7-215ENST00000506161 PMLP29590 882 aa17.49■□□□□ 0.39
PDLIM7-215ENST00000506161 GPD2P43304 727 aa17.49■□□□□ 0.39
PDLIM7-215ENST00000506161 RPL34P49207 117 aaKnown RBP17.49■□□□□ 0.39
PDLIM7-215ENST00000506161 DGKGP49619 791 aa17.49■□□□□ 0.39
PDLIM7-215ENST00000506161 MFAP3P55082 362 aa17.49■□□□□ 0.39
PDLIM7-215ENST00000506161 COG7P83436 770 aa17.49■□□□□ 0.39
PDLIM7-215ENST00000506161 GOLGA8FQ08AF8 430 aa17.49■□□□□ 0.39
PDLIM7-215ENST00000506161 GOLGA8DPQ0D2H9 430 aa17.49■□□□□ 0.39
PDLIM7-215ENST00000506161 MAP7D1Q3KQU3 841 aa17.49■□□□□ 0.39
PDLIM7-215ENST00000506161 PMS2CLQ68D20 193 aa17.49■□□□□ 0.39
PDLIM7-215ENST00000506161 TMEM215Q68D42 235 aa17.49■□□□□ 0.39
PDLIM7-215ENST00000506161 CREBRFQ8IUR6 639 aa17.49■□□□□ 0.39
PDLIM7-215ENST00000506161 SCML4Q8N228 414 aa17.49■□□□□ 0.39
PDLIM7-215ENST00000506161 ARHGAP18Q8N392 663 aa17.49■□□□□ 0.39
PDLIM7-215ENST00000506161 DNAI2Q9GZS0 605 aa17.49■□□□□ 0.39
PDLIM7-215ENST00000506161 MIS12Q9H081 205 aa17.49■□□□□ 0.39
PDLIM7-215ENST00000506161 CNGB3Q9NQW8 809 aa17.49■□□□□ 0.39
PDLIM7-215ENST00000506161 CACNA2D2Q9NY47 1150 aa17.49■□□□□ 0.39
PDLIM7-215ENST00000506161 KIAA1257Q9ULG3 409 aa17.49■□□□□ 0.39
PDLIM7-215ENST00000506161 GOLGA6L7A0A1B0GV03 622 aa17.48■□□□□ 0.39
PDLIM7-215ENST00000506161 PATE3B3GLJ2 98 aa17.48■□□□□ 0.39
PDLIM7-215ENST00000506161 KRT5P13647 590 aa17.48■□□□□ 0.39
PDLIM7-215ENST00000506161 PON1P27169 355 aa17.48■□□□□ 0.39
PDLIM7-215ENST00000506161 MPLP40238 635 aa17.48■□□□□ 0.39
PDLIM7-215ENST00000506161 P2RY2P41231 377 aa17.48■□□□□ 0.39
PDLIM7-215ENST00000506161 PITX1P78337 314 aaPredicted RBP17.48■□□□□ 0.39
PDLIM7-215ENST00000506161 MIIPQ5JXC2 388 aa17.48■□□□□ 0.39
PDLIM7-215ENST00000506161 EOGTQ5NDL2 527 aa17.48■□□□□ 0.39
PDLIM7-215ENST00000506161 MSANTD2Q6P1R3 559 aa17.48■□□□□ 0.39
PDLIM7-215ENST00000506161 SIX6OS1Q8N1H7 587 aa17.48■□□□□ 0.39
PDLIM7-215ENST00000506161 WDTC1Q8N5D0 677 aa17.48■□□□□ 0.39
PDLIM7-215ENST00000506161 WFDC5Q8TCV5 224 aa17.48■□□□□ 0.39
PDLIM7-215ENST00000506161 IPO9Q96P70 1041 aaKnown RBP17.48■□□□□ 0.39
PDLIM7-215ENST00000506161 WDR35Q9P2L0 1181 aa17.48■□□□□ 0.39
PDLIM7-215ENST00000506161 FOXD2O60548 495 aaPredicted RBP17.47■□□□□ 0.39
PDLIM7-215ENST00000506161 IGLV3-27P01718 113 aa17.47■□□□□ 0.39
PDLIM7-215ENST00000506161 LTFP02788 710 aa17.47■□□□□ 0.39
PDLIM7-215ENST00000506161 HOXB2P14652 356 aa17.47■□□□□ 0.39
PDLIM7-215ENST00000506161 HOXD9P28356 352 aaPredicted RBP17.47■□□□□ 0.39
PDLIM7-215ENST00000506161 SLC6A4P31645 630 aa17.47■□□□□ 0.39
PDLIM7-215ENST00000506161 GBP1P32455 592 aa17.47■□□□□ 0.39
PDLIM7-215ENST00000506161 SLC8A3P57103 927 aa17.47■□□□□ 0.39
PDLIM7-215ENST00000506161 SHC2P98077 582 aa17.47■□□□□ 0.39
PDLIM7-215ENST00000506161 ARHGAP44Q17R89 818 aa17.47■□□□□ 0.39
PDLIM7-215ENST00000506161 HSF5Q4G112 596 aaPredicted RBP17.47■□□□□ 0.39
PDLIM7-215ENST00000506161 IL31Q6EBC2 164 aa17.47■□□□□ 0.39
PDLIM7-215ENST00000506161 NADSYN1Q6IA69 706 aa17.47■□□□□ 0.39
PDLIM7-215ENST00000506161 CLEC17AQ6ZS10 378 aa17.47■□□□□ 0.39
PDLIM7-215ENST00000506161 TADA2BQ86TJ2 420 aa17.47■□□□□ 0.39
PDLIM7-215ENST00000506161 SCUBE3Q8IX30 993 aa17.47■□□□□ 0.39
PDLIM7-215ENST00000506161 CPXM2Q8N436 756 aa17.47■□□□□ 0.39
PDLIM7-215ENST00000506161 ZNF606Q8WXB4 792 aa17.47■□□□□ 0.39
PDLIM7-215ENST00000506161 SORCS1Q8WY21 1168 aa17.47■□□□□ 0.39
PDLIM7-215ENST00000506161 PLD4Q96BZ4 506 aa17.47■□□□□ 0.39
PDLIM7-215ENST00000506161 LOXL4Q96JB6 756 aa17.47■□□□□ 0.39
PDLIM7-215ENST00000506161 XPO6Q96QU8 1125 aaKnown RBP17.47■□□□□ 0.39
PDLIM7-215ENST00000506161 CDK5RAP1Q96SZ6 601 aaKnown RBP17.47■□□□□ 0.39
PDLIM7-215ENST00000506161 NAALADL1Q9UQQ1 740 aa17.47■□□□□ 0.39
PDLIM7-215ENST00000506161 GON4LQ3T8J9 2241 aa17.47■□□□□ 0.39
PDLIM7-215ENST00000506161 PCDH15Q96QU1 1955 aa17.46■□□□□ 0.39
PDLIM7-215ENST00000506161 BCLAF3A2AJT9 711 aaKnown RBP17.46■□□□□ 0.39
PDLIM7-215ENST00000506161 PAPSS1O43252 624 aaPredicted RBP17.46■□□□□ 0.39
PDLIM7-215ENST00000506161 LETM1O95202 739 aaPredicted RBP17.46■□□□□ 0.39
PDLIM7-215ENST00000506161 ZNF806P0C7X5 589 aa17.46■□□□□ 0.39
PDLIM7-215ENST00000506161 NDUFV2P19404 249 aa17.46■□□□□ 0.39
PDLIM7-215ENST00000506161 NTSR1P30989 418 aa17.46■□□□□ 0.39
PDLIM7-215ENST00000506161 IL12RB1P42701 662 aa17.46■□□□□ 0.39
PDLIM7-215ENST00000506161 KCNMA1Q12791 1236 aa17.46■□□□□ 0.39
PDLIM7-215ENST00000506161 ACAP1Q15027 740 aa17.46■□□□□ 0.39
PDLIM7-215ENST00000506161 N4BP2L1Q5TBK1 243 aaPredicted RBP17.46■□□□□ 0.39
PDLIM7-215ENST00000506161 SYPL2Q5VXT5 272 aa17.46■□□□□ 0.39
PDLIM7-215ENST00000506161 DEFB119Q8N690 84 aa17.46■□□□□ 0.39
PDLIM7-215ENST00000506161 MLKLQ8NB16 471 aa17.46■□□□□ 0.39
PDLIM7-215ENST00000506161 GPT2Q8TD30 523 aa17.46■□□□□ 0.39
PDLIM7-215ENST00000506161 GABRG3Q99928 467 aa17.46■□□□□ 0.39
PDLIM7-215ENST00000506161 SLC4A5Q9BY07 1137 aa17.46■□□□□ 0.39
PDLIM7-215ENST00000506161 DCLK3Q9C098 648 aa17.46■□□□□ 0.39
PDLIM7-215ENST00000506161 ABCC13Q9NSE7 274 aa17.46■□□□□ 0.39
PDLIM7-215ENST00000506161 SAMSN1Q9NSI8 373 aaKnown RBP17.46■□□□□ 0.39
PDLIM7-215ENST00000506161 CALCOCO1Q9P1Z2 691 aa17.46■□□□□ 0.39
PDLIM7-215ENST00000506161 STRIP2Q9ULQ0 834 aa17.46■□□□□ 0.39
PDLIM7-215ENST00000506161 SLC27A6Q9Y2P4 619 aa17.46■□□□□ 0.39
PDLIM7-215ENST00000506161 FAM208BQ5VWN6 2430 aa17.46■□□□□ 0.38
PDLIM7-215ENST00000506161 NUMA1Q14980 2115 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms