RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 ZNF195O14628 629 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 PRPSAP2O60256 369 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 CSDE1O75534 798 aaKnown RBP12.28□□□□□ -0.44
UBE3D-206ENST00000505226 TNNC2P02585 160 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 ICAM3P32942 547 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 GBE1Q04446 702 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 PDE1CQ14123 709 aaPredicted RBP12.28□□□□□ -0.44
UBE3D-206ENST00000505226 KRT81Q14533 505 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 STXBP2Q15833 593 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 RASIP1Q5U651 963 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 SLC9A4Q6AI14 798 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 ILDR2Q71H61 639 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 C12orf29Q8N999 325 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 PIWIL2Q8TC59 973 aaKnown RBP12.28□□□□□ -0.44
UBE3D-206ENST00000505226 NCSTNQ92542 709 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 KHSRPQ92945 711 aaKnown RBP eCLIP12.28□□□□□ -0.447e-7■□□□□ 10.2
UBE3D-206ENST00000505226 PGLYRP2Q96PD5 576 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 KLC2Q9H0B6 622 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 ACAD9Q9H845 621 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 MOCS1Q9NZB8 636 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 IL1RAPL1Q9NZN1 696 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 BTBD7Q9P203 1132 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 PSAT1Q9Y617 370 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 ITGB3P05106 788 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 SLC1A6P48664 564 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 RGS7P49802 495 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 IDH3AP50213 366 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 EFNA5P52803 228 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 ASPHQ12797 758 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 PPM1JQ5JR12 505 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 CFAP157Q5JU67 520 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 N4BP2L1Q5TBK1 243 aaPredicted RBP12.28□□□□□ -0.44
UBE3D-206ENST00000505226 C6orf163Q5TEZ5 329 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 WDR78Q5VTH9 848 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 OR6B2Q6IFH4 312 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 RASSF3Q86WH2 238 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 EGFL6Q8IUX8 553 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 PHTF2Q8N3S3 785 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 FLAD1Q8NFF5 587 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 RAB3IL1Q8TBN0 382 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 SLC26A7Q8TE54 656 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 TRAPPC12Q8WVT3 735 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 ANKRD36BP1Q96IX9 119 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 HEXIM2Q96MH2 286 aaKnown RBP12.28□□□□□ -0.44
UBE3D-206ENST00000505226 CYP4F11Q9HBI6 524 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 ZDHHC7Q9NXF8 308 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 MFHAS1Q9Y4C4 1052 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 PHIPQ8WWQ0 1821 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 E2F8A0AVK6 867 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 APOL1O14791 398 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 CCNT2O60583 730 aaKnown RBP12.28□□□□□ -0.44
UBE3D-206ENST00000505226 FKBP6O75344 327 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 TCF7P36402 384 aaPredicted RBP12.28□□□□□ -0.44
UBE3D-206ENST00000505226 ATXN1P54253 815 aaKnown RBP12.28□□□□□ -0.44
UBE3D-206ENST00000505226 PCLAFQ15004 111 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 FBXL19Q6PCT2 694 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 ARCQ7LC44 396 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 ADGRG6Q86SQ4 1221 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 HPS6Q86YV9 775 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 NETO2Q8NC67 525 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 MCUQ8NE86 351 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 TFB1MQ8WVM0 346 aaKnown RBP12.28□□□□□ -0.44
UBE3D-206ENST00000505226 EPAS1Q99814 870 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 SNRNP25Q9BV90 132 aaKnown RBP12.28□□□□□ -0.44
UBE3D-206ENST00000505226 TEX13BQ9BXU2 312 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 OXCT2Q9BYC2 517 aaPredicted RBP12.28□□□□□ -0.44
UBE3D-206ENST00000505226 PCDHA11Q9Y5I1 949 aa12.28□□□□□ -0.44
UBE3D-206ENST00000505226 LOC100653049A0A140TA62 436 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 GPR25O00155 361 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 TPP1O14773 563 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 GABBR2O75899 941 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 KRT34O76011 436 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 STK10O94804 968 aaKnown RBP12.27□□□□□ -0.45
UBE3D-206ENST00000505226 F7P08709 466 aaPredicted RBP12.27□□□□□ -0.45
UBE3D-206ENST00000505226 PRKG1Q13976 671 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 TBCCQ15814 346 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 PPP6R3Q5H9R7 873 aaPredicted RBP12.27□□□□□ -0.45
UBE3D-206ENST00000505226 TCHHL1Q5QJ38 904 aaPredicted RBP12.27□□□□□ -0.45
UBE3D-206ENST00000505226 MPZL3Q6UWV2 235 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 TIFABQ6ZNK6 161 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 TSHZ1Q6ZSZ6 1077 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 ACAD11Q709F0 780 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 C10orf107Q8IVU9 208 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 DEPDC1BQ8WUY9 529 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 NGRNQ9NPE2 291 aaKnown RBP12.27□□□□□ -0.45
UBE3D-206ENST00000505226 NRBP2Q9NSY0 501 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 ZNF358Q9NW07 568 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 CDH22Q9UJ99 828 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 WDR27A2RRH5 827 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 A6NJR5 290 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 LACTBL1A8MY62 500 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 OR6B1O95007 311 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 BTKQ06187 659 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 ATF7IP2Q5U623 682 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 JADE1Q6IE81 842 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 AAGABQ6PD74 315 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 FRMD7Q6ZUT3 714 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 EEPD1Q7L9B9 569 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 ZNF280CQ8ND82 737 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 UBE2OQ9C0C9 1292 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms