RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 LCLAT1Q6UWP7 414 aa13.38□□□□□ -0.27
RNF4-206ENST00000504782 NUDT18Q6ZVK8 323 aa13.38□□□□□ -0.27
RNF4-206ENST00000504782 LPCAT2Q7L5N7 544 aa13.38□□□□□ -0.27
RNF4-206ENST00000504782 TRMT11Q7Z4G4 463 aaKnown RBP13.38□□□□□ -0.27
RNF4-206ENST00000504782 C11orf74Q86VG3 221 aa13.38□□□□□ -0.27
RNF4-206ENST00000504782 ARHGAP18Q8N392 663 aa13.38□□□□□ -0.27
RNF4-206ENST00000504782 PPM1KQ8N3J5 372 aa13.38□□□□□ -0.27
RNF4-206ENST00000504782 RBBP8NLQ8NC74 664 aaPredicted RBP13.38□□□□□ -0.27
RNF4-206ENST00000504782 SLC35F5Q8WV83 523 aa13.38□□□□□ -0.27
RNF4-206ENST00000504782 SORCS1Q8WY21 1168 aa13.38□□□□□ -0.27
RNF4-206ENST00000504782 KCTD13Q8WZ19 329 aa13.38□□□□□ -0.27
RNF4-206ENST00000504782 SPACA7Q96KW9 195 aa13.38□□□□□ -0.27
RNF4-206ENST00000504782 KREMEN1Q96MU8 473 aa13.38□□□□□ -0.27
RNF4-206ENST00000504782 NT5C1BQ96P26 610 aa13.38□□□□□ -0.27
RNF4-206ENST00000504782 CDK5RAP1Q96SZ6 601 aaKnown RBP13.38□□□□□ -0.27
RNF4-206ENST00000504782 FAM124BQ9H5Z6 455 aaPredicted RBP13.38□□□□□ -0.27
RNF4-206ENST00000504782 HESX1Q9UBX0 185 aa13.38□□□□□ -0.27
RNF4-206ENST00000504782 HOOK1Q9UJC3 728 aaKnown RBP13.38□□□□□ -0.27
RNF4-206ENST00000504782 CYP8B1Q9UNU6 501 aa13.38□□□□□ -0.27
RNF4-206ENST00000504782 ZNF510Q9Y2H8 683 aa13.38□□□□□ -0.27
RNF4-206ENST00000504782 STON1Q9Y6Q2 735 aa13.38□□□□□ -0.27
RNF4-206ENST00000504782 MUC22E2RYF6 1773 aaPredicted RBP13.37□□□□□ -0.27
RNF4-206ENST00000504782 CKAP5Q14008 2032 aa13.37□□□□□ -0.27
RNF4-206ENST00000504782 PMM2O15305 246 aa13.37□□□□□ -0.27
RNF4-206ENST00000504782 KCNK5O95279 499 aa13.37□□□□□ -0.27
RNF4-206ENST00000504782 TBXAS1P24557 533 aaPredicted RBP13.37□□□□□ -0.27
RNF4-206ENST00000504782 CHKAP35790 457 aa13.37□□□□□ -0.27
RNF4-206ENST00000504782 IL12RB1P42701 662 aa13.37□□□□□ -0.27
RNF4-206ENST00000504782 SLC8A3P57103 927 aa13.37□□□□□ -0.27
RNF4-206ENST00000504782 DAOAP59103 153 aa13.37□□□□□ -0.27
RNF4-206ENST00000504782 YWHAEP62258 255 aaKnown RBP13.37□□□□□ -0.27
RNF4-206ENST00000504782 RPL6Q02878 288 aaKnown RBP13.37□□□□□ -0.27
RNF4-206ENST00000504782 KCNH2Q12809 1159 aa13.37□□□□□ -0.27
RNF4-206ENST00000504782 STIM1Q13586 685 aa13.37□□□□□ -0.27
RNF4-206ENST00000504782 TRIM61Q5EBN2 209 aa13.37□□□□□ -0.27
RNF4-206ENST00000504782 SLC41A1Q8IVJ1 513 aa13.37□□□□□ -0.27
RNF4-206ENST00000504782 TRIM59Q8IWR1 403 aa13.37□□□□□ -0.27
RNF4-206ENST00000504782 FAM217AQ8IXS0 508 aa13.37□□□□□ -0.27
RNF4-206ENST00000504782 CPXM2Q8N436 756 aa13.37□□□□□ -0.27
RNF4-206ENST00000504782 EHBP1Q8NDI1 1231 aa13.37□□□□□ -0.27
RNF4-206ENST00000504782 MRGPRX1Q96LB2 322 aa13.37□□□□□ -0.27
RNF4-206ENST00000504782 IPO9Q96P70 1041 aaKnown RBP13.37□□□□□ -0.27
RNF4-206ENST00000504782 MED15Q96RN5 788 aa13.37□□□□□ -0.27
RNF4-206ENST00000504782 SRRTQ9BXP5 876 aaKnown RBP13.37□□□□□ -0.27
RNF4-206ENST00000504782 DCLK3Q9C098 648 aa13.37□□□□□ -0.27
RNF4-206ENST00000504782 STRIP2Q9ULQ0 834 aa13.37□□□□□ -0.27
RNF4-206ENST00000504782 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.37□□□□□ -0.27
RNF4-206ENST00000504782 SLC27A6Q9Y2P4 619 aa13.37□□□□□ -0.27
RNF4-206ENST00000504782 PCDH15Q96QU1 1955 aa13.37□□□□□ -0.27
RNF4-206ENST00000504782 GON4LQ3T8J9 2241 aa13.36□□□□□ -0.27
RNF4-206ENST00000504782 GOLGA6L7A0A1B0GV03 622 aa13.36□□□□□ -0.27
RNF4-206ENST00000504782 M0QYV0 167 aa13.36□□□□□ -0.27
RNF4-206ENST00000504782 GFRA2O00451 464 aa13.36□□□□□ -0.27
RNF4-206ENST00000504782 PAEPP09466 180 aa13.36□□□□□ -0.27
RNF4-206ENST00000504782 ZNF132P52740 706 aa13.36□□□□□ -0.27
RNF4-206ENST00000504782 APBA1Q02410 837 aa13.36□□□□□ -0.27
RNF4-206ENST00000504782 CNGA2Q16280 664 aa13.36□□□□□ -0.27
RNF4-206ENST00000504782 FUT11Q495W5 492 aa13.36□□□□□ -0.27
RNF4-206ENST00000504782 LYSMD4Q5XG99 296 aa13.36□□□□□ -0.27
RNF4-206ENST00000504782 SDE2Q6IQ49 451 aa13.36□□□□□ -0.27
RNF4-206ENST00000504782 PSAPL1Q6NUJ1 521 aa13.36□□□□□ -0.27
RNF4-206ENST00000504782 SYT12Q8IV01 421 aa13.36□□□□□ -0.27
RNF4-206ENST00000504782 SIX6OS1Q8N1H7 587 aa13.36□□□□□ -0.27
RNF4-206ENST00000504782 DDI1Q8WTU0 396 aa13.36□□□□□ -0.27
RNF4-206ENST00000504782 PLD4Q96BZ4 506 aa13.36□□□□□ -0.27
RNF4-206ENST00000504782 GTPBP4Q9BZE4 634 aaKnown RBP13.36□□□□□ -0.27
RNF4-206ENST00000504782 ACP6Q9NPH0 428 aa13.36□□□□□ -0.27
RNF4-206ENST00000504782 THAP10Q9P2Z0 257 aaPredicted RBP13.36□□□□□ -0.27
RNF4-206ENST00000504782 PILRBQ9UKJ0 227 aa13.36□□□□□ -0.27
RNF4-206ENST00000504782 FYNP06241 537 aa13.35□□□□□ -0.27
RNF4-206ENST00000504782 SETSIPP0DME0 302 aa13.35□□□□□ -0.27
RNF4-206ENST00000504782 PRKCHP24723 683 aa13.35□□□□□ -0.27
RNF4-206ENST00000504782 HOXD9P28356 352 aaPredicted RBP13.35□□□□□ -0.27
RNF4-206ENST00000504782 MAPK8P45983 427 aa13.35□□□□□ -0.27
RNF4-206ENST00000504782 ZNF33AQ06730 810 aa13.35□□□□□ -0.27
RNF4-206ENST00000504782 ENPP2Q13822 863 aa13.35□□□□□ -0.27
RNF4-206ENST00000504782 ZNF234Q14588 700 aa13.35□□□□□ -0.27
RNF4-206ENST00000504782 CAMK4Q16566 473 aa13.35□□□□□ -0.27
RNF4-206ENST00000504782 UAP1L1Q3KQV9 507 aa13.35□□□□□ -0.27
RNF4-206ENST00000504782 RFWD3Q6PCD5 774 aa13.35□□□□□ -0.27
RNF4-206ENST00000504782 GJB7Q6PEY0 223 aa13.35□□□□□ -0.27
RNF4-206ENST00000504782 KIAA1324Q6UXG2 1013 aaKnown RBP13.35□□□□□ -0.27
RNF4-206ENST00000504782 OR2I1PQ8NGU4 316 aa13.35□□□□□ -0.27
RNF4-206ENST00000504782 WFDC5Q8TCV5 224 aa13.35□□□□□ -0.27
RNF4-206ENST00000504782 RNF139Q8WU17 664 aa13.35□□□□□ -0.27
RNF4-206ENST00000504782 DDX1Q92499 740 aaKnown RBP13.35□□□□□ -0.27
RNF4-206ENST00000504782 MYEOVQ96EZ4 313 aa13.35□□□□□ -0.27
RNF4-206ENST00000504782 MKRN2Q9H000 416 aaKnown RBP13.35□□□□□ -0.27
RNF4-206ENST00000504782 MIS12Q9H081 205 aa13.35□□□□□ -0.27
RNF4-206ENST00000504782 INTS2Q9H0H0 1204 aaKnown RBP13.35□□□□□ -0.27
RNF4-206ENST00000504782 TMEM9BQ9NQ34 198 aa13.35□□□□□ -0.27
RNF4-206ENST00000504782 CNGB3Q9NQW8 809 aa13.35□□□□□ -0.27
RNF4-206ENST00000504782 ABCC13Q9NSE7 274 aa13.35□□□□□ -0.27
RNF4-206ENST00000504782 ELOVL2Q9NXB9 296 aa13.35□□□□□ -0.27
RNF4-206ENST00000504782 KIAA1257Q9ULG3 409 aa13.35□□□□□ -0.27
RNF4-206ENST00000504782 ASCC3Q8N3C0 2202 aaKnown RBP13.34□□□□□ -0.27
RNF4-206ENST00000504782 BICDL2A1A5D9 508 aa13.34□□□□□ -0.27
RNF4-206ENST00000504782 KCNJ18B7U540 433 aa13.34□□□□□ -0.27
RNF4-206ENST00000504782 P4HA2O15460 535 aa13.34□□□□□ -0.27
RNF4-206ENST00000504782 AP5Z1O43299 807 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms