RNA–Protein interactions for RNA: ENST00000504010.5

NR1I3-219, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-219ENST00000504010 LHX5Q9H2C1 402 aa9.48□□□□□ -0.89
NR1I3-219ENST00000504010 SYNCQ9H7C4 482 aa9.48□□□□□ -0.89
NR1I3-219ENST00000504010 LMAN1LQ9HAT1 526 aa9.48□□□□□ -0.89
NR1I3-219ENST00000504010 SMPD4Q9NXE4 827 aa9.48□□□□□ -0.89
NR1I3-219ENST00000504010 TRPM5Q9NZQ8 1165 aa9.48□□□□□ -0.89
NR1I3-219ENST00000504010 COX16Q9P0S2 106 aa9.48□□□□□ -0.89
NR1I3-219ENST00000504010 MYO1AQ9UBC5 1043 aa9.48□□□□□ -0.89
NR1I3-219ENST00000504010 HSFX1Q9UBD0 423 aa9.48□□□□□ -0.89
NR1I3-219ENST00000504010 NAGPAQ9UK23 515 aa9.48□□□□□ -0.89
NR1I3-219ENST00000504010 MAFFQ9ULX9 164 aa9.48□□□□□ -0.89
NR1I3-219ENST00000504010 MYO6Q9UM54 1294 aa9.48□□□□□ -0.89
NR1I3-219ENST00000504010 NDRG2Q9UN36 371 aaKnown RBP9.48□□□□□ -0.89
NR1I3-219ENST00000504010 DAAM1Q9Y4D1 1078 aa9.48□□□□□ -0.89
NR1I3-219ENST00000504010 PCDHGA5Q9Y5G8 931 aa9.48□□□□□ -0.89
NR1I3-219ENST00000504010 ZNF840PA6NDX5 716 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 SHISA7A6NL88 538 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 CHURC1-FNTBB4DL54 471 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 RTN3O95197 1032 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-219ENST00000504010 CCDC172P0C7W6 258 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 IRF1P10914 325 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 ABCB4P21439 1286 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 VIPR2P41587 438 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 PRKCIP41743 596 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 NSFP46459 744 aaKnown RBP9.47□□□□□ -0.89
NR1I3-219ENST00000504010 FNTBP49356 437 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 DAOAP59103 153 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 YWHAGP61981 247 aaKnown RBP eCLIP9.47□□□□□ -0.89
NR1I3-219ENST00000504010 PITX1P78337 314 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-219ENST00000504010 PTP4A2Q12974 167 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 LRRC32Q14392 662 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 TSR1Q2NL82 804 aaKnown RBP9.47□□□□□ -0.89
NR1I3-219ENST00000504010 RAB6CQ53S08 254 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 RAB41Q5JT25 222 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 CCDC122Q5T0U0 273 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 ACAD10Q6JQN1 1059 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 PSAPL1Q6NUJ1 521 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 ZNF677Q86XU0 584 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 XYLT1Q86Y38 959 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 CNGA4Q8IV77 575 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 EMC1Q8N766 993 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 JOSD2Q8TAC2 188 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 RIN3Q8TB24 985 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 ADAM32Q8TC27 787 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 KCTD13Q8WZ19 329 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 FAM3CQ92520 227 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 SLITRK1Q96PX8 696 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 GCNAQ96QF7 691 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 TTLL2Q9BWV7 592 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 TMEM121BQ9BXQ6 578 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-219ENST00000504010 PACSIN1Q9BY11 444 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 RAB6CQ9H0N0 254 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 DEF6Q9H4E7 631 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 BRD9Q9H8M2 597 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 NHEJ1Q9H9Q4 299 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-219ENST00000504010 AVENQ9NQS1 362 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-219ENST00000504010 METTL5Q9NRN9 209 aaKnown RBP9.47□□□□□ -0.89
NR1I3-219ENST00000504010 GKN1Q9NS71 199 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 ZNHIT6Q9NWK9 470 aaKnown RBP9.47□□□□□ -0.89
NR1I3-219ENST00000504010 ADAM22Q9P0K1 906 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 SFMBT1Q9UHJ3 866 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 RASAL2Q9UJF2 1139 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 WASF3Q9UPY6 502 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 NAALADL1Q9UQQ1 740 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 SCML2Q9UQR0 700 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 CCL26Q9Y258 94 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 ASB3Q9Y575 518 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 CEP83Q9Y592 693 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 USP3Q9Y6I4 520 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 NCANO14594 1321 aa9.47□□□□□ -0.89
NR1I3-219ENST00000504010 A0A0U1RQJ8 604 aa9.46□□□□□ -0.9
NR1I3-219ENST00000504010 ZNF263O14978 683 aa9.46□□□□□ -0.9
NR1I3-219ENST00000504010 MSI1O43347 362 aaKnown RBP9.46□□□□□ -0.9
NR1I3-219ENST00000504010 COCHO43405 550 aa9.46□□□□□ -0.9
NR1I3-219ENST00000504010 AKR1B10O60218 316 aa9.46□□□□□ -0.9
NR1I3-219ENST00000504010 EPN2O95208 641 aa9.46□□□□□ -0.9
NR1I3-219ENST00000504010 PRAMEF12O95522 483 aa9.46□□□□□ -0.9
NR1I3-219ENST00000504010 FTLP02792 175 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-219ENST00000504010 MBL2P11226 248 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-219ENST00000504010 RARGP13631 454 aa9.46□□□□□ -0.9
NR1I3-219ENST00000504010 TFE3P19532 575 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-219ENST00000504010 HNRNPH3P31942 346 aaKnown RBP9.46□□□□□ -0.9
NR1I3-219ENST00000504010 CDH5P33151 784 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-219ENST00000504010 EPHA5P54756 1037 aa9.46□□□□□ -0.9
NR1I3-219ENST00000504010 SATB1Q01826 763 aa9.46□□□□□ -0.9
NR1I3-219ENST00000504010 EFEMP1Q12805 493 aa9.46□□□□□ -0.9
NR1I3-219ENST00000504010 SF3A2Q15428 464 aaKnown RBP9.46□□□□□ -0.9
NR1I3-219ENST00000504010 FAM78AQ5JUQ0 283 aa9.46□□□□□ -0.9
NR1I3-219ENST00000504010 FAM102AQ5T9C2 384 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-219ENST00000504010 SYPL2Q5VXT5 272 aa9.46□□□□□ -0.9
NR1I3-219ENST00000504010 BSPRYQ5W0U4 402 aa9.46□□□□□ -0.9
NR1I3-219ENST00000504010 BTBD8Q5XKL5 378 aa9.46□□□□□ -0.9
NR1I3-219ENST00000504010 TRNP1Q6NT89 227 aa9.46□□□□□ -0.9
NR1I3-219ENST00000504010 RAD9BQ6WBX8 426 aa9.46□□□□□ -0.9
NR1I3-219ENST00000504010 TMEM110Q86TL2 294 aa9.46□□□□□ -0.9
NR1I3-219ENST00000504010 WDR5BQ86VZ2 330 aa9.46□□□□□ -0.9
NR1I3-219ENST00000504010 MIB1Q86YT6 1006 aa9.46□□□□□ -0.9
NR1I3-219ENST00000504010 ZSCAN18Q8TBC5 510 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-219ENST00000504010 KCNV2Q8TDN2 545 aa9.46□□□□□ -0.9
NR1I3-219ENST00000504010 IPO4Q8TEX9 1081 aaKnown RBP9.46□□□□□ -0.9
NR1I3-219ENST00000504010 ZCCHC14Q8WYQ9 949 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms