RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 ARHGEF19Q8IW93 802 aa23.05■■□□□ 1.28
LSM6-203ENST00000503982 DEFB119Q8N690 84 aa23.05■■□□□ 1.28
LSM6-203ENST00000503982 EHBP1Q8NDI1 1231 aa23.05■■□□□ 1.28
LSM6-203ENST00000503982 IPO4Q8TEX9 1081 aaKnown RBP23.05■■□□□ 1.28
LSM6-203ENST00000503982 CNGB3Q9NQW8 809 aa23.05■■□□□ 1.28
LSM6-203ENST00000503982 ABCC13Q9NSE7 274 aa23.05■■□□□ 1.28
LSM6-203ENST00000503982 CALCOCO1Q9P1Z2 691 aa23.05■■□□□ 1.28
LSM6-203ENST00000503982 YJEFN3A6XGL0 299 aa23.04■■□□□ 1.28
LSM6-203ENST00000503982 E7ENQ6 273 aa23.04■■□□□ 1.28
LSM6-203ENST00000503982 PMM2O15305 246 aa23.04■■□□□ 1.28
LSM6-203ENST00000503982 TSPAN3O60637 253 aa23.04■■□□□ 1.28
LSM6-203ENST00000503982 RPL6Q02878 288 aaKnown RBP23.04■■□□□ 1.28
LSM6-203ENST00000503982 STARD3Q14849 445 aa23.04■■□□□ 1.28
LSM6-203ENST00000503982 CAMK4Q16566 473 aa23.04■■□□□ 1.28
LSM6-203ENST00000503982 FYB2Q5VWT5 728 aa23.04■■□□□ 1.28
LSM6-203ENST00000503982 KIAA1324Q6UXG2 1013 aaKnown RBP23.04■■□□□ 1.28
LSM6-203ENST00000503982 KCTD13Q8WZ19 329 aa23.04■■□□□ 1.28
LSM6-203ENST00000503982 TFAP2BQ92481 460 aa23.04■■□□□ 1.28
LSM6-203ENST00000503982 INTS2Q9H0H0 1204 aaKnown RBP23.04■■□□□ 1.28
LSM6-203ENST00000503982 HCN2Q9UL51 889 aa23.04■■□□□ 1.28
LSM6-203ENST00000503982 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.04■■□□□ 1.28
LSM6-203ENST00000503982 ATXN2Q99700 1313 aaKnown RBP23.04■■□□□ 1.28
LSM6-203ENST00000503982 TNRC6BQ9UPQ9 1833 aaKnown RBP23.03■■□□□ 1.28
LSM6-203ENST00000503982 PATE3B3GLJ2 98 aa23.03■■□□□ 1.28
LSM6-203ENST00000503982 RNF225M0QZC1 329 aaPredicted RBP23.03■■□□□ 1.28
LSM6-203ENST00000503982 AP5Z1O43299 807 aa23.03■■□□□ 1.28
LSM6-203ENST00000503982 PENKP01210 267 aaPredicted RBP23.03■■□□□ 1.28
LSM6-203ENST00000503982 DAOAP59103 153 aa23.03■■□□□ 1.28
LSM6-203ENST00000503982 CNGA2Q16280 664 aa23.03■■□□□ 1.28
LSM6-203ENST00000503982 MAP7D1Q3KQU3 841 aa23.03■■□□□ 1.28
LSM6-203ENST00000503982 LYSMD4Q5XG99 296 aa23.03■■□□□ 1.28
LSM6-203ENST00000503982 KIAA1211LQ6NV74 962 aa23.03■■□□□ 1.28
LSM6-203ENST00000503982 SLC36A4Q6YBV0 504 aa23.03■■□□□ 1.28
LSM6-203ENST00000503982 ANKS1BQ7Z6G8 1248 aa23.03■■□□□ 1.28
LSM6-203ENST00000503982 TRIM59Q8IWR1 403 aa23.03■■□□□ 1.28
LSM6-203ENST00000503982 CIPCQ9C0C6 399 aa23.03■■□□□ 1.28
LSM6-203ENST00000503982 MIS12Q9H081 205 aa23.03■■□□□ 1.28
LSM6-203ENST00000503982 MBD1Q9UIS9 605 aaPredicted RBP23.03■■□□□ 1.28
LSM6-203ENST00000503982 CYP8B1Q9UNU6 501 aa23.03■■□□□ 1.28
LSM6-203ENST00000503982 HBS1LQ9Y450 684 aaKnown RBP23.03■■□□□ 1.28
LSM6-203ENST00000503982 A0A1W2PQF6 199 aa23.02■■□□□ 1.28
LSM6-203ENST00000503982 C4orf47A7E2U8 309 aa23.02■■□□□ 1.28
LSM6-203ENST00000503982 WASH3PC4AMC7 463 aa23.02■■□□□ 1.28
LSM6-203ENST00000503982 NDUFV2P19404 249 aa23.02■■□□□ 1.28
LSM6-203ENST00000503982 MFAP3P55082 362 aa23.02■■□□□ 1.28
LSM6-203ENST00000503982 GEN1Q17RS7 908 aa23.02■■□□□ 1.28
LSM6-203ENST00000503982 PMF1Q6P1K2 205 aa23.02■■□□□ 1.28
LSM6-203ENST00000503982 FOXR2Q6PJQ5 311 aa23.02■■□□□ 1.28
LSM6-203ENST00000503982 BHLHA9Q7RTU4 235 aa23.02■■□□□ 1.28
LSM6-203ENST00000503982 CPXM2Q8N436 756 aa23.02■■□□□ 1.28
LSM6-203ENST00000503982 NUSAP1Q9BXS6 441 aaKnown RBP23.02■■□□□ 1.28
LSM6-203ENST00000503982 ST7Q9NRC1 585 aa23.02■■□□□ 1.28
LSM6-203ENST00000503982 STON1Q9Y6Q2 735 aa23.02■■□□□ 1.28
LSM6-203ENST00000503982 MSI1O43347 362 aaKnown RBP23.01■■□□□ 1.27
LSM6-203ENST00000503982 NDUFS2O75306 463 aa23.01■■□□□ 1.27
LSM6-203ENST00000503982 ZNF217O75362 1048 aa23.01■■□□□ 1.27
LSM6-203ENST00000503982 PTGER3P43115 390 aa23.01■■□□□ 1.27
LSM6-203ENST00000503982 GCNT1Q02742 428 aa23.01■■□□□ 1.27
LSM6-203ENST00000503982 TRIP4Q15650 581 aaPredicted RBP23.01■■□□□ 1.27
LSM6-203ENST00000503982 TPD52L1Q16890 204 aaPredicted RBP23.01■■□□□ 1.27
LSM6-203ENST00000503982 UAP1L1Q3KQV9 507 aa23.01■■□□□ 1.27
LSM6-203ENST00000503982 MPPE1Q53F39 396 aa23.01■■□□□ 1.27
LSM6-203ENST00000503982 TRIM61Q5EBN2 209 aa23.01■■□□□ 1.27
LSM6-203ENST00000503982 DAB2IPQ5VWQ8 1189 aa23.01■■□□□ 1.27
LSM6-203ENST00000503982 TRIML1Q8N9V2 468 aa23.01■■□□□ 1.27
LSM6-203ENST00000503982 LMO3Q8TAP4 145 aa23.01■■□□□ 1.27
LSM6-203ENST00000503982 GABRG3Q99928 467 aa23.01■■□□□ 1.27
LSM6-203ENST00000503982 SLC6A17Q9H1V8 727 aa23.01■■□□□ 1.27
LSM6-203ENST00000503982 UBE2TQ9NPD8 197 aaPredicted RBP23.01■■□□□ 1.27
LSM6-203ENST00000503982 FBXO10Q9UK96 956 aa23.01■■□□□ 1.27
LSM6-203ENST00000503982 SLC27A6Q9Y2P4 619 aa23.01■■□□□ 1.27
LSM6-203ENST00000503982 NCOR2Q9Y618 2525 aa23.01■■□□□ 1.27
LSM6-203ENST00000503982 ADAMTS9Q9P2N4 1935 aa23■■□□□ 1.27
LSM6-203ENST00000503982 LNP1A1A4G5 178 aa23■■□□□ 1.27
LSM6-203ENST00000503982 GFRA2O00451 464 aa23■■□□□ 1.27
LSM6-203ENST00000503982 SYNCRIPO60506 623 aaKnown RBP23■■□□□ 1.27
LSM6-203ENST00000503982 LTFP02788 710 aa23■■□□□ 1.27
LSM6-203ENST00000503982 CFIP05156 583 aa23■■□□□ 1.27
LSM6-203ENST00000503982 ADRB1P08588 477 aa23■■□□□ 1.27
LSM6-203ENST00000503982 E2F5Q15329 346 aa23■■□□□ 1.27
LSM6-203ENST00000503982 PKDCCQ504Y2 493 aa23■■□□□ 1.27
LSM6-203ENST00000503982 IRGQQ8WZA9 623 aa23■■□□□ 1.27
LSM6-203ENST00000503982 FAM149B1Q96BN6 582 aa23■■□□□ 1.27
LSM6-203ENST00000503982 TMEM9BQ9NQ34 198 aa23■■□□□ 1.27
LSM6-203ENST00000503982 KIAA1468Q9P260 1216 aa23■■□□□ 1.27
LSM6-203ENST00000503982 PI4KAP42356 2102 aa23■■□□□ 1.27
LSM6-203ENST00000503982 GON4LQ3T8J9 2241 aa22.99■■□□□ 1.27
LSM6-203ENST00000503982 FBXO21O94952 628 aa22.99■■□□□ 1.27
LSM6-203ENST00000503982 USP8P40818 1118 aa22.99■■□□□ 1.27
LSM6-203ENST00000503982 DPP6P42658 865 aa22.99■■□□□ 1.27
LSM6-203ENST00000503982 SYT12Q8IV01 421 aa22.99■■□□□ 1.27
LSM6-203ENST00000503982 CLEC4CQ8WTT0 213 aa22.99■■□□□ 1.27
LSM6-203ENST00000503982 SLC35F5Q8WV83 523 aa22.99■■□□□ 1.27
LSM6-203ENST00000503982 TMA16Q96EY4 203 aaKnown RBP22.99■■□□□ 1.27
LSM6-203ENST00000503982 P2RY11Q96G91 374 aa22.99■■□□□ 1.27
LSM6-203ENST00000503982 HSFY1Q96LI6 401 aa22.99■■□□□ 1.27
LSM6-203ENST00000503982 CRACR2AQ9BSW2 395 aa22.99■■□□□ 1.27
LSM6-203ENST00000503982 CLSTN2Q9H4D0 955 aa22.99■■□□□ 1.27
LSM6-203ENST00000503982 THAP10Q9P2Z0 257 aaPredicted RBP22.99■■□□□ 1.27
LSM6-203ENST00000503982 IGHV1OR15-9A0A0B4J2B8 117 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms