RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 CELF4Q9BZC1 486 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 WNT8AQ9H1J5 351 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 LRMDAQ9H2I8 198 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 HIPK3Q9H422 1215 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 CCDC134Q9H6E4 229 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 RXFP1Q9HBX9 757 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 TRNAU1APQ9NX07 287 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 ARHGAP28Q9P2N2 729 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 CDY2AQ9Y6F7 541 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 UMODL1Q5DID0 1318 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 SMIM23A6NLE4 172 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 FADS2P1A8MWK0 482 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 RGS13O14921 159 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 ZC3H11AO75152 810 aaKnown RBP eCLIP9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 BAIAP3O94812 1187 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 RHOBTB3O94955 611 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 UNC5CO95185 931 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 RPN1P04843 607 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 P2RX3P56373 397 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 NLRP11P59045 1033 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 PTENP60484 403 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 COG7P83436 770 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 DNAJC3Q13217 504 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 DMP1Q13316 513 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 MBTPS1Q14703 1052 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 MAPRE2Q15555 327 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 CCDC6Q16204 474 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 NFE2Q16621 373 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 HSP90AA5PQ58FG0 334 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 SHEQ5VZ18 495 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 METTL2BQ6P1Q9 378 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 RBM44Q6ZP01 1051 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 CYP2U1Q7Z449 544 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 GLRX5Q86SX6 157 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 LRRTM3Q86VH5 581 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 KSR1Q8IVT5 923 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 IFT20Q8IY31 132 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 CSGALNACT2Q8N6G5 542 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 RNF149Q8NC42 400 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 SLC22A8Q8TCC7 542 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 TMEM40Q8WWA1 233 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 TRIM43Q96BQ3 446 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 TBCBQ99426 244 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 TTPALQ9BTX7 342 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 STRA6Q9BX79 667 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 CCDC113Q9H0I3 377 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 ETNK1Q9HBU6 452 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 TMEM39AQ9NV64 488 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 USP15Q9Y4E8 981 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 PCDHA5Q9Y5H7 936 aa9.93□□□□□ -0.82
PDLIM5-207ENST00000503974 A0A087WZ62 844 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 B8ZZF3 427 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 O00370 1275 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 ATP5HO75947 161 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 TIMP1P01033 207 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 IQCF3P0C7M6 154 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 ESRRAP11474 423 aaPredicted RBP9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 IDEP14735 1019 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 DARSP14868 501 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 CSTF2P33240 577 aaKnown RBP eCLIP9.92□□□□□ -0.822e-6■■□□□ 13.9
PDLIM5-207ENST00000503974 PHKA2P46019 1235 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 HNRNPFP52597 415 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 PEX3P56589 373 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 MAP3K7CLP57077 242 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 SLC34A1Q06495 639 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 GPNMBQ14956 572 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 PCBP1Q15365 356 aaKnown RBP eCLIP9.92□□□□□ -0.825e-8■■■■■ 41.6
PDLIM5-207ENST00000503974 KIZQ2M2Z5 673 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 HERC4Q5GLZ8 1057 aaPredicted RBP9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 ODR4Q5SWX8 454 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 SPATA1Q5VX52 437 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 PRR23CQ6ZRP0 262 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 HS2ST1Q7LGA3 356 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 TMEM161BQ8NDZ6 487 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 CDC26Q8NHZ8 85 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 PMEPA1Q969W9 287 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 CCDC51Q96ER9 411 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 NLRP4Q96MN2 994 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 PRICKLE1Q96MT3 831 aaPredicted RBP9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 COQ7Q99807 217 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 FDXACB1Q9BRP7 624 aaPredicted RBP9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 FOXP3Q9BZS1 431 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 RNF38Q9H0F5 515 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 RBM38Q9H0Z9 239 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 C2orf40Q9H1Z8 148 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 ARMC7Q9H6L4 198 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 TMEM206Q9H813 350 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 MARCH7Q9H992 704 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 CDHR5Q9HBB8 845 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 VPS51Q9UID3 782 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 SCN5AQ14524 2016 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 GTPBP10A4D1E9 387 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 H0YCG3 227 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 INO80B-WBP1J3KQ70 363 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 M0QZ92 97 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 ZNF185O15231 689 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 TRMUO75648 421 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 RSL1D1O76021 490 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 FGF18O76093 207 aa9.92□□□□□ -0.82
PDLIM5-207ENST00000503974 GJB6O95452 261 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms