RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 IDEP14735 1019 aa16.65■□□□□ 0.26
PDLIM7-210ENST00000503827 ABCB4P21439 1286 aa16.65■□□□□ 0.26
PDLIM7-210ENST00000503827 CHKAP35790 457 aa16.65■□□□□ 0.26
PDLIM7-210ENST00000503827 BCAT1P54687 386 aa16.65■□□□□ 0.26
PDLIM7-210ENST00000503827 KCNT1Q5JUK3 1230 aa16.65■□□□□ 0.26
PDLIM7-210ENST00000503827 FBXL19Q6PCT2 694 aa16.65■□□□□ 0.26
PDLIM7-210ENST00000503827 Q6ZNB5 142 aa16.65■□□□□ 0.26
PDLIM7-210ENST00000503827 FAM181AQ8N9Y4 354 aa16.65■□□□□ 0.26
PDLIM7-210ENST00000503827 LGMNQ99538 433 aa16.65■□□□□ 0.26
PDLIM7-210ENST00000503827 ACE2Q9BYF1 805 aaPredicted RBP16.65■□□□□ 0.26
PDLIM7-210ENST00000503827 CIPCQ9C0C6 399 aa16.65■□□□□ 0.26
PDLIM7-210ENST00000503827 KRT82Q9NSB4 513 aa16.65■□□□□ 0.26
PDLIM7-210ENST00000503827 CCDC39Q9UFE4 941 aa16.65■□□□□ 0.26
PDLIM7-210ENST00000503827 ZNF510Q9Y2H8 683 aa16.65■□□□□ 0.26
PDLIM7-210ENST00000503827 H3BQV1 296 aa16.64■□□□□ 0.25
PDLIM7-210ENST00000503827 VILLO15195 856 aa16.64■□□□□ 0.25
PDLIM7-210ENST00000503827 EIF5BO60841 1220 aaKnown RBP16.64■□□□□ 0.25
PDLIM7-210ENST00000503827 STAU1O95793 577 aaKnown RBP16.64■□□□□ 0.25
PDLIM7-210ENST00000503827 DLATP10515 647 aaKnown RBP16.64■□□□□ 0.25
PDLIM7-210ENST00000503827 ACADVLP49748 655 aa16.64■□□□□ 0.25
PDLIM7-210ENST00000503827 KCNH2Q12809 1159 aa16.64■□□□□ 0.25
PDLIM7-210ENST00000503827 TRPC3Q13507 836 aa16.64■□□□□ 0.25
PDLIM7-210ENST00000503827 BROXQ5VW32 411 aa16.64■□□□□ 0.25
PDLIM7-210ENST00000503827 FYB2Q5VWT5 728 aa16.64■□□□□ 0.25
PDLIM7-210ENST00000503827 KLHDC10Q6PID8 442 aa16.64■□□□□ 0.25
PDLIM7-210ENST00000503827 SV2BQ7L1I2 683 aa16.64■□□□□ 0.25
PDLIM7-210ENST00000503827 ZMIZ2Q8NF64 920 aa16.64■□□□□ 0.25
PDLIM7-210ENST00000503827 SKA1Q96BD8 255 aa16.64■□□□□ 0.25
PDLIM7-210ENST00000503827 PIWIL1Q96J94 861 aaKnown RBP16.64■□□□□ 0.25
PDLIM7-210ENST00000503827 ELF4Q99607 663 aaPredicted RBP16.64■□□□□ 0.25
PDLIM7-210ENST00000503827 MDM4O15151 490 aa16.63■□□□□ 0.25
PDLIM7-210ENST00000503827 TIMM44O43615 452 aa16.63■□□□□ 0.25
PDLIM7-210ENST00000503827 STC2O76061 302 aa16.63■□□□□ 0.25
PDLIM7-210ENST00000503827 CYBBP04839 570 aa16.63■□□□□ 0.25
PDLIM7-210ENST00000503827 ATICP31939 592 aa16.63■□□□□ 0.25
PDLIM7-210ENST00000503827 TMPRSS3P57727 454 aa16.63■□□□□ 0.25
PDLIM7-210ENST00000503827 RACK1P63244 317 aaKnown RBP16.63■□□□□ 0.25
PDLIM7-210ENST00000503827 CAMK2GQ13555 558 aaPredicted RBP16.63■□□□□ 0.25
PDLIM7-210ENST00000503827 TBC1D25Q3MII6 688 aa16.63■□□□□ 0.25
PDLIM7-210ENST00000503827 FMNL3Q8IVF7 1028 aa16.63■□□□□ 0.25
PDLIM7-210ENST00000503827 FUKQ8N0W3 1084 aa16.63■□□□□ 0.25
PDLIM7-210ENST00000503827 EID2Q8N6I1 236 aa16.63■□□□□ 0.25
PDLIM7-210ENST00000503827 SORCS1Q8WY21 1168 aa16.63■□□□□ 0.25
PDLIM7-210ENST00000503827 SYAP1Q96A49 352 aaPredicted RBP16.63■□□□□ 0.25
PDLIM7-210ENST00000503827 P2RY11Q96G91 374 aa16.63■□□□□ 0.25
PDLIM7-210ENST00000503827 SMOQ99835 787 aa16.63■□□□□ 0.25
PDLIM7-210ENST00000503827 FGFBP2Q9BYJ0 223 aa16.63■□□□□ 0.25
PDLIM7-210ENST00000503827 OSER1Q9NX31 292 aa16.63■□□□□ 0.25
PDLIM7-210ENST00000503827 HSPBP1Q9NZL4 362 aa16.63■□□□□ 0.25
PDLIM7-210ENST00000503827 SCML2Q9UQR0 700 aa16.63■□□□□ 0.25
PDLIM7-210ENST00000503827 BEST1O76090 585 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 DNTTP04053 509 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 RARGP13631 454 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 GLDCP23378 1020 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 UCNP55089 124 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 MAP3K7CLP57077 242 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 MYL6P60660 151 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 ZBTB16Q05516 673 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 ILKQ13418 452 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 PKDCCQ504Y2 493 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 C10orf120Q5SQS8 335 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 PRAMEF14Q5SWL7 426 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 STXBP4Q6ZWJ1 553 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 TADA2BQ86TJ2 420 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 ERICH1Q86X53 443 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 CACTIN-AS1Q8N1I8 211 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 RDH13Q8NBN7 331 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 RBBP8NLQ8NC74 664 aaPredicted RBP16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 ZNF248Q8NDW4 579 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 TSC1Q92574 1164 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 EPSTI1Q96J88 318 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 CGRRF1Q99675 332 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 SGK2Q9HBY8 427 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 CSNK1G1Q9HCP0 422 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 PANK4Q9NVE7 773 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 NUDT5Q9UKK9 219 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 MGAQ8IWI9 3026 aa16.62■□□□□ 0.25
PDLIM7-210ENST00000503827 HECTD1Q9ULT8 2610 aa16.61■□□□□ 0.25
PDLIM7-210ENST00000503827 ATMQ13315 3056 aa16.61■□□□□ 0.25
PDLIM7-210ENST00000503827 PYCARD-AS1I3L0S3 204 aa16.61■□□□□ 0.25
PDLIM7-210ENST00000503827 YKT6O15498 198 aa16.61■□□□□ 0.25
PDLIM7-210ENST00000503827 CLSTN1O94985 981 aa16.61■□□□□ 0.25
PDLIM7-210ENST00000503827 WISP1O95388 367 aa16.61■□□□□ 0.25
PDLIM7-210ENST00000503827 C6P13671 934 aa16.61■□□□□ 0.25
PDLIM7-210ENST00000503827 SNRNP35Q16560 246 aaKnown RBP16.61■□□□□ 0.25
PDLIM7-210ENST00000503827 TTC31Q49AM3 519 aaPredicted RBP16.61■□□□□ 0.25
PDLIM7-210ENST00000503827 RRAGBQ5VZM2 374 aa16.61■□□□□ 0.25
PDLIM7-210ENST00000503827 ACOT1Q86TX2 421 aa16.61■□□□□ 0.25
PDLIM7-210ENST00000503827 SAP25Q8TEE9 199 aa16.61■□□□□ 0.25
PDLIM7-210ENST00000503827 CCDC127Q96BQ5 260 aa16.61■□□□□ 0.25
PDLIM7-210ENST00000503827 SLC2A11Q9BYW1 496 aa16.61■□□□□ 0.25
PDLIM7-210ENST00000503827 DCLK3Q9C098 648 aa16.61■□□□□ 0.25
PDLIM7-210ENST00000503827 SMYD3Q9H7B4 428 aa16.61■□□□□ 0.25
PDLIM7-210ENST00000503827 FBRSQ9HAH7 460 aa16.61■□□□□ 0.25
PDLIM7-210ENST00000503827 NMUR1Q9HB89 426 aa16.61■□□□□ 0.25
PDLIM7-210ENST00000503827 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.61■□□□□ 0.25
PDLIM7-210ENST00000503827 CLCA2Q9UQC9 943 aa16.61■□□□□ 0.25
PDLIM7-210ENST00000503827 A0A1W2PQH9 124 aa16.6■□□□□ 0.25
PDLIM7-210ENST00000503827 FRMD3A2A2Y4 597 aa16.6■□□□□ 0.25
PDLIM7-210ENST00000503827 CYP26A1O43174 497 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms