RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 NRG1Q02297 640 aaPredicted RBP20.53■□□□□ 0.88
SCAMP3-209ENST00000497470 MTSS1LQ765P7 747 aa20.53■□□□□ 0.88
SCAMP3-209ENST00000497470 VSIG1Q86XK7 387 aa20.53■□□□□ 0.88
SCAMP3-209ENST00000497470 ARID3BQ8IVW6 561 aaPredicted RBP20.53■□□□□ 0.88
SCAMP3-209ENST00000497470 ZDHHC14Q8IZN3 488 aa20.53■□□□□ 0.88
SCAMP3-209ENST00000497470 BTN2A3PQ96KV6 586 aa20.53■□□□□ 0.88
SCAMP3-209ENST00000497470 FCRL2Q96LA5 508 aaPredicted RBP20.53■□□□□ 0.88
SCAMP3-209ENST00000497470 TRIM7Q9C029 511 aa20.53■□□□□ 0.88
SCAMP3-209ENST00000497470 WDCPQ9H6R7 721 aa20.53■□□□□ 0.88
SCAMP3-209ENST00000497470 TRPC7Q9HCX4 862 aa20.53■□□□□ 0.88
SCAMP3-209ENST00000497470 ALG6Q9Y672 507 aa20.53■□□□□ 0.88
SCAMP3-209ENST00000497470 MIF4GDA9UHW6 222 aaKnown RBP20.52■□□□□ 0.88
SCAMP3-209ENST00000497470 H3BQ06 376 aaPredicted RBP20.52■□□□□ 0.88
SCAMP3-209ENST00000497470 MDM4O15151 490 aa20.52■□□□□ 0.88
SCAMP3-209ENST00000497470 STC2O76061 302 aa20.52■□□□□ 0.88
SCAMP3-209ENST00000497470 TBX18O95935 607 aa20.52■□□□□ 0.88
SCAMP3-209ENST00000497470 KRT7P08729 469 aa20.52■□□□□ 0.88
SCAMP3-209ENST00000497470 GJA1P17302 382 aa20.52■□□□□ 0.88
SCAMP3-209ENST00000497470 HARS2P49590 506 aaKnown RBP20.52■□□□□ 0.88
SCAMP3-209ENST00000497470 USP4Q13107 963 aa20.52■□□□□ 0.88
SCAMP3-209ENST00000497470 CC2D1AQ6P1N0 951 aaPredicted RBP20.52■□□□□ 0.88
SCAMP3-209ENST00000497470 ATP6V0D2Q8N8Y2 350 aa20.52■□□□□ 0.88
SCAMP3-209ENST00000497470 ZSCAN18Q8TBC5 510 aaPredicted RBP20.52■□□□□ 0.88
SCAMP3-209ENST00000497470 USP13Q92995 863 aaPredicted RBP20.52■□□□□ 0.88
SCAMP3-209ENST00000497470 SLC22A12Q96S37 553 aa20.52■□□□□ 0.88
SCAMP3-209ENST00000497470 OSBPL2Q9H1P3 480 aa20.52■□□□□ 0.88
SCAMP3-209ENST00000497470 SLITRK6Q9H5Y7 841 aa20.52■□□□□ 0.88
SCAMP3-209ENST00000497470 LZTFL1Q9NQ48 299 aa20.52■□□□□ 0.88
SCAMP3-209ENST00000497470 PIGVQ9NUD9 493 aa20.52■□□□□ 0.88
SCAMP3-209ENST00000497470 TBC1D14Q9P2M4 693 aa20.52■□□□□ 0.88
SCAMP3-209ENST00000497470 PRKAG3Q9UGI9 489 aa20.52■□□□□ 0.88
SCAMP3-209ENST00000497470 SFMBT1Q9UHJ3 866 aa20.52■□□□□ 0.88
SCAMP3-209ENST00000497470 RASAL2Q9UJF2 1139 aa20.52■□□□□ 0.88
SCAMP3-209ENST00000497470 LSM7Q9UK45 103 aaKnown RBP20.52■□□□□ 0.88
SCAMP3-209ENST00000497470 NUP210Q8TEM1 1887 aaPredicted RBP20.52■□□□□ 0.87
SCAMP3-209ENST00000497470 SLC12A8A0AV02 714 aa20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 MACROD2A1Z1Q3 448 aa20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 GRID2IPA4D2P6 1211 aa20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 ZNF487B1APH4 448 aa20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 NRG2O14511 850 aaPredicted RBP20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 SLC9A3R1O14745 358 aaPredicted RBP20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 PSTPIP1O43586 416 aa20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 PRPSAP2O60256 369 aa20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 KIF5CO60282 957 aa20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 ECI2O75521 394 aa20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 APOEP02649 317 aa20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 ADRA1BP35368 520 aa20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 NAP1L1P55209 391 aaKnown RBP20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 PITX1P78337 314 aaPredicted RBP20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 ATP11AP98196 1134 aa20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 MESDQ14696 234 aa20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 C15orf59Q2T9L4 293 aaPredicted RBP20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 Q6ZNB5 142 aa20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 GET4Q7L5D6 327 aaPredicted RBP20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 DAAM2Q86T65 1068 aa20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 FAM217AQ8IXS0 508 aa20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 ARFGAP1Q8N6T3 406 aa20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 CD101Q93033 1021 aa20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 ELSPBP1Q96BH3 223 aa20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 CYP2S1Q96SQ9 504 aa20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 DDX50Q9BQ39 737 aaKnown RBP20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 APOL5Q9BWW9 433 aa20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 ADAM33Q9BZ11 813 aa20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 TRIM10Q9UDY6 481 aa20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 USP18Q9UMW8 372 aa20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 TFR2Q9UP52 801 aa20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 CPQQ9Y646 472 aa20.51■□□□□ 0.87
SCAMP3-209ENST00000497470 CCDC66A2RUB6 948 aa20.5■□□□□ 0.87
SCAMP3-209ENST00000497470 ANHXE9PGG2 379 aa20.5■□□□□ 0.87
SCAMP3-209ENST00000497470 BUB1O43683 1085 aa20.5■□□□□ 0.87
SCAMP3-209ENST00000497470 GREM1O60565 184 aa20.5■□□□□ 0.87
SCAMP3-209ENST00000497470 MIPP30301 263 aa20.5■□□□□ 0.87
SCAMP3-209ENST00000497470 ZNF77Q15935 545 aa20.5■□□□□ 0.87
SCAMP3-209ENST00000497470 FAM78AQ5JUQ0 283 aa20.5■□□□□ 0.87
SCAMP3-209ENST00000497470 STXBP5Q5T5C0 1151 aa20.5■□□□□ 0.87
SCAMP3-209ENST00000497470 ZSCAN30Q86W11 494 aa20.5■□□□□ 0.87
SCAMP3-209ENST00000497470 MIB1Q86YT6 1006 aa20.5■□□□□ 0.87
SCAMP3-209ENST00000497470 RHOT1Q8IXI2 618 aa20.5■□□□□ 0.87
SCAMP3-209ENST00000497470 FAM71BQ8TC56 605 aa20.5■□□□□ 0.87
SCAMP3-209ENST00000497470 ADAMTS19Q8TE59 1207 aa20.5■□□□□ 0.87
SCAMP3-209ENST00000497470 DEPDC1BQ8WUY9 529 aa20.5■□□□□ 0.87
SCAMP3-209ENST00000497470 ZSWIM3Q96MP5 696 aa20.5■□□□□ 0.87
SCAMP3-209ENST00000497470 MYADMQ96S97 322 aa20.5■□□□□ 0.87
SCAMP3-209ENST00000497470 PRDM16Q9HAZ2 1276 aa20.5■□□□□ 0.87
SCAMP3-209ENST00000497470 ZFP14Q9HCL3 533 aa20.5■□□□□ 0.87
SCAMP3-209ENST00000497470 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.5■□□□□ 0.87
SCAMP3-209ENST00000497470 CALCOCO1Q9P1Z2 691 aa20.5■□□□□ 0.87
SCAMP3-209ENST00000497470 NUDT5Q9UKK9 219 aa20.5■□□□□ 0.87
SCAMP3-209ENST00000497470 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.5■□□□□ 0.87
SCAMP3-209ENST00000497470 DOCK8Q8NF50 2099 aa20.5■□□□□ 0.87
SCAMP3-209ENST00000497470 A0A0U1RQJ8 604 aa20.49■□□□□ 0.87
SCAMP3-209ENST00000497470 LEFTY2O00292 366 aa20.49■□□□□ 0.87
SCAMP3-209ENST00000497470 MOCS3O95396 460 aa20.49■□□□□ 0.87
SCAMP3-209ENST00000497470 TFE3P19532 575 aaPredicted RBP20.49■□□□□ 0.87
SCAMP3-209ENST00000497470 CTNNA2P26232 953 aa20.49■□□□□ 0.87
SCAMP3-209ENST00000497470 SLC11A2P49281 568 aa20.49■□□□□ 0.87
SCAMP3-209ENST00000497470 MLLT6P55198 1093 aaPredicted RBP20.49■□□□□ 0.87
SCAMP3-209ENST00000497470 SLC25A11Q02978 314 aaKnown RBP20.49■□□□□ 0.87
SCAMP3-209ENST00000497470 NME3Q13232 169 aa20.49■□□□□ 0.87
SCAMP3-209ENST00000497470 ERMARDQ5T6L9 678 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms