RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 UNC45BQ8IWX7 931 aa22.64■■□□□ 1.22
C9orf3-222ENST00000496567 NIPA2Q8N8Q9 360 aa22.64■■□□□ 1.22
C9orf3-222ENST00000496567 SH3RF2Q8TEC5 729 aa22.64■■□□□ 1.22
C9orf3-222ENST00000496567 ATXN2LQ8WWM7 1075 aaKnown RBP22.64■■□□□ 1.22
C9orf3-222ENST00000496567 RNF34Q969K3 372 aa22.64■■□□□ 1.22
C9orf3-222ENST00000496567 BTBD6Q96KE9 485 aa22.64■■□□□ 1.22
C9orf3-222ENST00000496567 PIGVQ9NUD9 493 aa22.64■■□□□ 1.22
C9orf3-222ENST00000496567 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.64■■□□□ 1.22
C9orf3-222ENST00000496567 CCL26Q9Y258 94 aa22.64■■□□□ 1.22
C9orf3-222ENST00000496567 HMBSP08397 361 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 CCR1P32246 355 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 RNF10Q8N5U6 811 aaKnown RBP22.63■■□□□ 1.21
C9orf3-222ENST00000496567 SLC39A13Q96H72 371 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 RPGRIP1Q96KN7 1286 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 ADAM33Q9BZ11 813 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 DCLK3Q9C098 648 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 CALCOCO1Q9P1Z2 691 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 LSM7Q9UK45 103 aaKnown RBP22.63■■□□□ 1.21
C9orf3-222ENST00000496567 SH3BP1Q9Y3L3 701 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 HELZP42694 1942 aaKnown RBP22.63■■□□□ 1.21
C9orf3-222ENST00000496567 A0A0U1RQJ8 604 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 C2CD4DB7Z1M9 353 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 STC2O76061 302 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 PROSCO94903 275 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 IGLV3-27P01718 113 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 APOEP02649 317 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 HARS2P49590 506 aaKnown RBP22.63■■□□□ 1.21
C9orf3-222ENST00000496567 CXCR3P49682 368 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 ZXDBP98169 803 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 MTA1Q13330 715 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 MESDQ14696 234 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 PPP2R5DQ14738 602 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 BRMS1LQ5PSV4 323 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 SH3PXD2AQ5TCZ1 1133 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 ZDHHC14Q8IZN3 488 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 ATRIPQ8WXE1 791 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 FCRL2Q96LA5 508 aaPredicted RBP22.63■■□□□ 1.21
C9orf3-222ENST00000496567 WDCPQ9H6R7 721 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 CFAP97Q9P2B7 532 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 PRKAG3Q9UGI9 489 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 SLC12A6Q9UHW9 1150 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 SALL4Q9UJQ4 1053 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 PYCARDQ9ULZ3 195 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 GUCA1BQ9UMX6 200 aa22.63■■□□□ 1.21
C9orf3-222ENST00000496567 MACROD2A1Z1Q3 448 aa22.62■■□□□ 1.21
C9orf3-222ENST00000496567 BUB1O43683 1085 aa22.62■■□□□ 1.21
C9orf3-222ENST00000496567 IRF1P10914 325 aa22.62■■□□□ 1.21
C9orf3-222ENST00000496567 FCARP24071 287 aa22.62■■□□□ 1.21
C9orf3-222ENST00000496567 MAN1A1P33908 653 aa22.62■■□□□ 1.21
C9orf3-222ENST00000496567 KCNQ1P51787 676 aa22.62■■□□□ 1.21
C9orf3-222ENST00000496567 HDAC4P56524 1084 aa22.62■■□□□ 1.21
C9orf3-222ENST00000496567 USP4Q13107 963 aa22.62■■□□□ 1.21
C9orf3-222ENST00000496567 ZNF77Q15935 545 aa22.62■■□□□ 1.21
C9orf3-222ENST00000496567 ZC3H12AQ5D1E8 599 aaKnown RBP22.62■■□□□ 1.21
C9orf3-222ENST00000496567 KIAA1958Q8N8K9 716 aa22.62■■□□□ 1.21
C9orf3-222ENST00000496567 TTC16Q8NEE8 873 aa22.62■■□□□ 1.21
C9orf3-222ENST00000496567 TPCN2Q8NHX9 752 aa22.62■■□□□ 1.21
C9orf3-222ENST00000496567 ADAMTS19Q8TE59 1207 aa22.62■■□□□ 1.21
C9orf3-222ENST00000496567 ELSPBP1Q96BH3 223 aa22.62■■□□□ 1.21
C9orf3-222ENST00000496567 LZTFL1Q9NQ48 299 aa22.62■■□□□ 1.21
C9orf3-222ENST00000496567 TRIM10Q9UDY6 481 aa22.62■■□□□ 1.21
C9orf3-222ENST00000496567 ZNF510Q9Y2H8 683 aa22.62■■□□□ 1.21
C9orf3-222ENST00000496567 E2F8A0AVK6 867 aa22.61■■□□□ 1.21
C9orf3-222ENST00000496567 ECI2O75521 394 aa22.61■■□□□ 1.21
C9orf3-222ENST00000496567 PCK1P35558 622 aa22.61■■□□□ 1.21
C9orf3-222ENST00000496567 VIPR2P41587 438 aa22.61■■□□□ 1.21
C9orf3-222ENST00000496567 TANGO2Q6ICL3 276 aa22.61■■□□□ 1.21
C9orf3-222ENST00000496567 HTR3DQ70Z44 454 aa22.61■■□□□ 1.21
C9orf3-222ENST00000496567 BPIFB1Q8TDL5 484 aa22.61■■□□□ 1.21
C9orf3-222ENST00000496567 C5orf42Q9H799 3197 aa22.6■■□□□ 1.21
C9orf3-222ENST00000496567 HEPACAM2A8MVW5 462 aa22.6■■□□□ 1.21
C9orf3-222ENST00000496567 SLC1A1P43005 524 aa22.6■■□□□ 1.21
C9orf3-222ENST00000496567 ATXN1P54253 815 aaKnown RBP22.6■■□□□ 1.21
C9orf3-222ENST00000496567 ARL13BQ3SXY8 428 aa22.6■■□□□ 1.21
C9orf3-222ENST00000496567 SCYL2Q6P3W7 929 aa22.6■■□□□ 1.21
C9orf3-222ENST00000496567 PARM1Q6UWI2 310 aa22.6■■□□□ 1.21
C9orf3-222ENST00000496567 FAM131BQ86XD5 332 aa22.6■■□□□ 1.21
C9orf3-222ENST00000496567 ATP6V0D2Q8N8Y2 350 aa22.6■■□□□ 1.21
C9orf3-222ENST00000496567 NXPE3Q969Y0 559 aa22.6■■□□□ 1.21
C9orf3-222ENST00000496567 TMEM110-MUSTN1A8MSY1 372 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 ANHXE9PGG2 379 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 BUB1BO60566 1050 aaPredicted RBP22.59■■□□□ 1.21
C9orf3-222ENST00000496567 LRCH4O75427 683 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 LATS1O95835 1130 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 CORO1AP31146 461 aaKnown RBP22.59■■□□□ 1.21
C9orf3-222ENST00000496567 C11orf63Q6NUN7 778 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 CC2D1AQ6P1N0 951 aaPredicted RBP22.59■■□□□ 1.21
C9orf3-222ENST00000496567 DAAM2Q86T65 1068 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 MFSD6LQ8IWD5 586 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 ADHFE1Q8IWW8 467 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 FGF14Q92915 247 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 AZIN2Q96A70 460 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 BTN2A3PQ96KV6 586 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 THG1LQ9NWX6 298 aaKnown RBP22.59■■□□□ 1.21
C9orf3-222ENST00000496567 ARHGEF38Q9NXL2 777 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 GOLGA6L9A6NEM1 432 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 KCNU1A8MYU2 1149 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 PRPSAP2O60256 369 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 MIPP30301 263 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 SLC11A2P49281 568 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms