RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 SMYD3Q9H7B4 428 aa14.14□□□□□ -0.15
COL1A1-209ENST00000495677 TM9SF3Q9HD45 589 aa14.14□□□□□ -0.15
COL1A1-209ENST00000495677 AGPAT3Q9NRZ7 376 aa14.14□□□□□ -0.15
COL1A1-209ENST00000495677 KRT82Q9NSB4 513 aa14.14□□□□□ -0.15
COL1A1-209ENST00000495677 PCDHA5Q9Y5H7 936 aa14.14□□□□□ -0.15
COL1A1-209ENST00000495677 CLIC4Q9Y696 253 aa14.14□□□□□ -0.15
COL1A1-209ENST00000495677 SLCO1B1Q9Y6L6 691 aa14.14□□□□□ -0.15
COL1A1-209ENST00000495677 DOCK9Q9BZ29 2069 aa14.13□□□□□ -0.15
COL1A1-209ENST00000495677 CAPN9O14815 690 aa14.13□□□□□ -0.15
COL1A1-209ENST00000495677 RRP8O43159 456 aaKnown RBP14.13□□□□□ -0.15
COL1A1-209ENST00000495677 TLX3O43711 291 aaPredicted RBP14.13□□□□□ -0.15
COL1A1-209ENST00000495677 RARGP13631 454 aa14.13□□□□□ -0.15
COL1A1-209ENST00000495677 CD27P26842 260 aa14.13□□□□□ -0.15
COL1A1-209ENST00000495677 ACSL1P33121 698 aa14.13□□□□□ -0.15
COL1A1-209ENST00000495677 HNF1BP35680 557 aa14.13□□□□□ -0.15
COL1A1-209ENST00000495677 CTSKP43235 329 aa14.13□□□□□ -0.15
COL1A1-209ENST00000495677 MAP3K7CLP57077 242 aa14.13□□□□□ -0.15
COL1A1-209ENST00000495677 COG7P83436 770 aa14.13□□□□□ -0.15
COL1A1-209ENST00000495677 ZBTB16Q05516 673 aa14.13□□□□□ -0.15
COL1A1-209ENST00000495677 ANKS1BQ7Z6G8 1248 aa14.13□□□□□ -0.15
COL1A1-209ENST00000495677 TADA2BQ86TJ2 420 aa14.13□□□□□ -0.15
COL1A1-209ENST00000495677 ACOT1Q86TX2 421 aa14.13□□□□□ -0.15
COL1A1-209ENST00000495677 C12orf56Q8IXR9 622 aa14.13□□□□□ -0.15
COL1A1-209ENST00000495677 CPXM2Q8N436 756 aa14.13□□□□□ -0.15
COL1A1-209ENST00000495677 ZNF843Q8N446 348 aa14.13□□□□□ -0.15
COL1A1-209ENST00000495677 SNIP1Q8TAD8 396 aaKnown RBP14.13□□□□□ -0.15
COL1A1-209ENST00000495677 CCDC127Q96BQ5 260 aa14.13□□□□□ -0.15
COL1A1-209ENST00000495677 LRRC27Q9C0I9 530 aa14.13□□□□□ -0.15
COL1A1-209ENST00000495677 TNMDQ9H2S6 317 aa14.13□□□□□ -0.15
COL1A1-209ENST00000495677 C6orf106Q9H6K1 298 aaPredicted RBP14.13□□□□□ -0.15
COL1A1-209ENST00000495677 FBRSQ9HAH7 460 aa14.13□□□□□ -0.15
COL1A1-209ENST00000495677 NMUR1Q9HB89 426 aa14.13□□□□□ -0.15
COL1A1-209ENST00000495677 CLIC5Q9NZA1 410 aa14.13□□□□□ -0.15
COL1A1-209ENST00000495677 CGNQ9P2M7 1197 aaKnown RBP14.13□□□□□ -0.15
COL1A1-209ENST00000495677 MGAQ8IWI9 3026 aa14.12□□□□□ -0.15
COL1A1-209ENST00000495677 A0A1B0GTQ1 180 aa14.12□□□□□ -0.15
COL1A1-209ENST00000495677 H0Y8X5 98 aa14.12□□□□□ -0.15
COL1A1-209ENST00000495677 C4BPAP04003 597 aaKnown RBP14.12□□□□□ -0.15
COL1A1-209ENST00000495677 EPHX1P07099 455 aa14.12□□□□□ -0.15
COL1A1-209ENST00000495677 JUPP14923 745 aa14.12□□□□□ -0.15
COL1A1-209ENST00000495677 PRKCHP24723 683 aa14.12□□□□□ -0.15
COL1A1-209ENST00000495677 STAT6P42226 847 aa14.12□□□□□ -0.15
COL1A1-209ENST00000495677 RABEP1Q15276 862 aa14.12□□□□□ -0.15
COL1A1-209ENST00000495677 TMEM215Q68D42 235 aa14.12□□□□□ -0.15
COL1A1-209ENST00000495677 CNNM4Q6P4Q7 775 aa14.12□□□□□ -0.15
COL1A1-209ENST00000495677 SLC2A14Q8TDB8 520 aa14.12□□□□□ -0.15
COL1A1-209ENST00000495677 BHMTQ93088 406 aa14.12□□□□□ -0.15
COL1A1-209ENST00000495677 BIRC7Q96CA5 298 aa14.12□□□□□ -0.15
COL1A1-209ENST00000495677 CLIC6Q96NY7 704 aa14.12□□□□□ -0.15
COL1A1-209ENST00000495677 CDK5RAP1Q96SZ6 601 aaKnown RBP14.12□□□□□ -0.15
COL1A1-209ENST00000495677 HNRNPABQ99729 332 aaKnown RBP14.12□□□□□ -0.15
COL1A1-209ENST00000495677 ORAI3Q9BRQ5 295 aa14.12□□□□□ -0.15
COL1A1-209ENST00000495677 BTBD1Q9H0C5 482 aa14.12□□□□□ -0.15
COL1A1-209ENST00000495677 SDCBP2Q9H190 292 aa14.12□□□□□ -0.15
COL1A1-209ENST00000495677 TMEM245Q9H330 911 aa14.12□□□□□ -0.15
COL1A1-209ENST00000495677 KBTBD4Q9NVX7 518 aa14.12□□□□□ -0.15
COL1A1-209ENST00000495677 FTSJ1Q9UET6 329 aa14.12□□□□□ -0.15
COL1A1-209ENST00000495677 SMC3Q9UQE7 1217 aa14.12□□□□□ -0.15
COL1A1-209ENST00000495677 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.12□□□□□ -0.15
COL1A1-209ENST00000495677 UBE4BO95155 1302 aa14.12□□□□□ -0.15
COL1A1-209ENST00000495677 ATMQ13315 3056 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 CFAP46Q8IYW2 2715 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 A0A087X0B3 334 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 A0A1W2PQH9 124 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 KCNK3O14649 394 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 VILLO15195 856 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 PHACTR2O75167 634 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 CYBBP04839 570 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 FAM200BP0CF97 657 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 P4HA1P13674 534 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 CCDC130P13994 396 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 KIF11P52732 1056 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 ZNF699Q32M78 642 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 C10orf120Q5SQS8 335 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 CLEC20AQ6ZU45 233 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 GPRIN1Q7Z2K8 1008 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 CCDC186Q7Z3E2 898 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 GPR155Q7Z3F1 870 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 FAM217AQ8IXS0 508 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 PARD3BQ8TEW8 1205 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 BAP1Q92560 729 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 WBP1Q96G27 269 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 LHX5Q9H2C1 402 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 SGK2Q9HBY8 427 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 USP3Q9Y6I4 520 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 TENM4Q6N022 2769 aa14.11□□□□□ -0.15
COL1A1-209ENST00000495677 ZNF462Q96JM2 2506 aa14.1□□□□□ -0.15
COL1A1-209ENST00000495677 ENC1O14682 589 aa14.1□□□□□ -0.15
COL1A1-209ENST00000495677 MDM4O15151 490 aa14.1□□□□□ -0.15
COL1A1-209ENST00000495677 CLIC2O15247 247 aa14.1□□□□□ -0.15
COL1A1-209ENST00000495677 CYP26A1O43174 497 aa14.1□□□□□ -0.15
COL1A1-209ENST00000495677 SEMA4FO95754 770 aa14.1□□□□□ -0.15
COL1A1-209ENST00000495677 RALAP11233 206 aa14.1□□□□□ -0.15
COL1A1-209ENST00000495677 TRIM21P19474 475 aaKnown RBP14.1□□□□□ -0.15
COL1A1-209ENST00000495677 NDST1P52848 882 aa14.1□□□□□ -0.15
COL1A1-209ENST00000495677 RACK1P63244 317 aaKnown RBP14.1□□□□□ -0.15
COL1A1-209ENST00000495677 NCOA4Q13772 614 aa14.1□□□□□ -0.15
COL1A1-209ENST00000495677 SGSM1Q2NKQ1 1148 aa14.1□□□□□ -0.15
COL1A1-209ENST00000495677 KCNT1Q5JUK3 1230 aa14.1□□□□□ -0.15
COL1A1-209ENST00000495677 SERPINA13PQ6UXR4 307 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms