RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 AFMP43652 599 aa18.43■□□□□ 0.54
TMEM53-209ENST00000495630 SUZ12Q15022 739 aaKnown RBP18.43■□□□□ 0.54
TMEM53-209ENST00000495630 EIF4HQ15056 248 aaKnown RBP18.43■□□□□ 0.54
TMEM53-209ENST00000495630 COL28A1Q2UY09 1125 aa18.43■□□□□ 0.54
TMEM53-209ENST00000495630 HLA-BQ31612 363 aa18.43■□□□□ 0.54
TMEM53-209ENST00000495630 SOWAHCQ53LP3 525 aaPredicted RBP18.43■□□□□ 0.54
TMEM53-209ENST00000495630 SPOPLQ6IQ16 392 aa18.43■□□□□ 0.54
TMEM53-209ENST00000495630 C1orf216Q8TAB5 229 aa18.43■□□□□ 0.54
TMEM53-209ENST00000495630 JAKMIP2Q96AA8 810 aa18.43■□□□□ 0.54
TMEM53-209ENST00000495630 TWNKQ96RR1 684 aa18.43■□□□□ 0.54
TMEM53-209ENST00000495630 DUSP16Q9BY84 665 aa18.43■□□□□ 0.54
TMEM53-209ENST00000495630 BACH2Q9BYV9 841 aa18.43■□□□□ 0.54
TMEM53-209ENST00000495630 SLC2A11Q9BYW1 496 aa18.43■□□□□ 0.54
TMEM53-209ENST00000495630 KCTD10Q9H3F6 313 aa18.43■□□□□ 0.54
TMEM53-209ENST00000495630 FAM13BQ9NYF5 915 aa18.43■□□□□ 0.54
TMEM53-209ENST00000495630 DKK4Q9UBT3 224 aa18.43■□□□□ 0.54
TMEM53-209ENST00000495630 EIF2B4Q9UI10 523 aaKnown RBP18.43■□□□□ 0.54
TMEM53-209ENST00000495630 HLA-DRAP01903 254 aa18.42■□□□□ 0.54
TMEM53-209ENST00000495630 CYBBP04839 570 aa18.42■□□□□ 0.54
TMEM53-209ENST00000495630 BNC1Q01954 994 aa18.42■□□□□ 0.54
TMEM53-209ENST00000495630 STK4Q13043 487 aa18.42■□□□□ 0.54
TMEM53-209ENST00000495630 ZNF234Q14588 700 aa18.42■□□□□ 0.54
TMEM53-209ENST00000495630 ANKS1BQ7Z6G8 1248 aa18.42■□□□□ 0.54
TMEM53-209ENST00000495630 CPXM2Q8N436 756 aa18.42■□□□□ 0.54
TMEM53-209ENST00000495630 BAHD1Q8TBE0 780 aaPredicted RBP18.42■□□□□ 0.54
TMEM53-209ENST00000495630 RHBDD1Q8TEB9 315 aa18.42■□□□□ 0.54
TMEM53-209ENST00000495630 AGO1Q9UL18 857 aaKnown RBP18.42■□□□□ 0.54
TMEM53-209ENST00000495630 ADAMTS20P59510 1910 aa18.41■□□□□ 0.54
TMEM53-209ENST00000495630 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.41■□□□□ 0.54
TMEM53-209ENST00000495630 FLRT2O43155 660 aa18.41■□□□□ 0.54
TMEM53-209ENST00000495630 DKK1O94907 266 aa18.41■□□□□ 0.54
TMEM53-209ENST00000495630 NR3C1P04150 777 aa18.41■□□□□ 0.54
TMEM53-209ENST00000495630 CORO1AP31146 461 aaKnown RBP18.41■□□□□ 0.54
TMEM53-209ENST00000495630 PIK3CAP42336 1068 aa18.41■□□□□ 0.54
TMEM53-209ENST00000495630 COPAP53621 1224 aa18.41■□□□□ 0.54
TMEM53-209ENST00000495630 RBBP8NLQ8NC74 664 aaPredicted RBP18.41■□□□□ 0.54
TMEM53-209ENST00000495630 MDM1Q8TC05 714 aa18.41■□□□□ 0.54
TMEM53-209ENST00000495630 UBXN6Q9BZV1 441 aa18.41■□□□□ 0.54
TMEM53-209ENST00000495630 IMPG2Q9BZV3 1241 aa18.41■□□□□ 0.54
TMEM53-209ENST00000495630 SCUBE2Q9NQ36 999 aa18.41■□□□□ 0.54
TMEM53-209ENST00000495630 TOR4AQ9NXH8 423 aa18.41■□□□□ 0.54
TMEM53-209ENST00000495630 FNDC3AQ9Y2H6 1198 aaKnown RBP18.41■□□□□ 0.54
TMEM53-209ENST00000495630 FRMD4BQ9Y2L6 1034 aa18.41■□□□□ 0.54
TMEM53-209ENST00000495630 MAPK13O15264 365 aa18.4■□□□□ 0.54
TMEM53-209ENST00000495630 KLRC4O43908 158 aa18.4■□□□□ 0.54
TMEM53-209ENST00000495630 KIF20AO95235 890 aa18.4■□□□□ 0.54
TMEM53-209ENST00000495630 SLFN14P0C7P3 912 aa18.4■□□□□ 0.54
TMEM53-209ENST00000495630 ATXN1LP0C7T5 689 aaKnown RBP18.4■□□□□ 0.54
TMEM53-209ENST00000495630 C7P10643 843 aa18.4■□□□□ 0.54
TMEM53-209ENST00000495630 VAMP7P51809 220 aa18.4■□□□□ 0.54
TMEM53-209ENST00000495630 AFF3P51826 1226 aaKnown RBP18.4■□□□□ 0.54
TMEM53-209ENST00000495630 EFEMP1Q12805 493 aa18.4■□□□□ 0.54
TMEM53-209ENST00000495630 C1orf220Q5T0J3 134 aa18.4■□□□□ 0.54
TMEM53-209ENST00000495630 CEP135Q66GS9 1140 aa18.4■□□□□ 0.54
TMEM53-209ENST00000495630 DENND1CQ8IV53 801 aa18.4■□□□□ 0.54
TMEM53-209ENST00000495630 CEP57L1Q8IYX8 460 aa18.4■□□□□ 0.54
TMEM53-209ENST00000495630 ARHGAP18Q8N392 663 aa18.4■□□□□ 0.54
TMEM53-209ENST00000495630 GALNT15Q8N3T1 639 aa18.4■□□□□ 0.54
TMEM53-209ENST00000495630 KIAA0895Q8NCT3 520 aa18.4■□□□□ 0.54
TMEM53-209ENST00000495630 HNRNPLLQ8WVV9 542 aaKnown RBP18.4■□□□□ 0.54
TMEM53-209ENST00000495630 OSGEPQ9NPF4 335 aa18.4■□□□□ 0.54
TMEM53-209ENST00000495630 FOXD4L1Q9NU39 408 aa18.4■□□□□ 0.54
TMEM53-209ENST00000495630 RASAL2Q9UJF2 1139 aa18.4■□□□□ 0.54
TMEM53-209ENST00000495630 STRIP2Q9ULQ0 834 aa18.4■□□□□ 0.54
TMEM53-209ENST00000495630 RAXQ9Y2V3 346 aa18.4■□□□□ 0.54
TMEM53-209ENST00000495630 ACACAQ13085 2346 aa18.39■□□□□ 0.53
TMEM53-209ENST00000495630 ITPR1Q14643 2758 aa18.39■□□□□ 0.53
TMEM53-209ENST00000495630 LAMA5O15230 3695 aa18.39■□□□□ 0.53
TMEM53-209ENST00000495630 A0A1B0GVT2 93 aa18.39■□□□□ 0.53
TMEM53-209ENST00000495630 EPHX1P07099 455 aa18.39■□□□□ 0.53
TMEM53-209ENST00000495630 HMBSP08397 361 aa18.39■□□□□ 0.53
TMEM53-209ENST00000495630 PRKCHP24723 683 aa18.39■□□□□ 0.53
TMEM53-209ENST00000495630 CSNK1EP49674 416 aaKnown RBP18.39■□□□□ 0.53
TMEM53-209ENST00000495630 ARID5AQ03989 594 aa18.39■□□□□ 0.53
TMEM53-209ENST00000495630 CAMK2GQ13555 558 aaPredicted RBP18.39■□□□□ 0.53
TMEM53-209ENST00000495630 PPP1R26Q5T8A7 1209 aaPredicted RBP18.39■□□□□ 0.53
TMEM53-209ENST00000495630 RESP18Q5W5W9 173 aa18.39■□□□□ 0.53
TMEM53-209ENST00000495630 SERPINA13PQ6UXR4 307 aa18.39■□□□□ 0.53
TMEM53-209ENST00000495630 OR2T3Q8NH03 318 aa18.39■□□□□ 0.53
TMEM53-209ENST00000495630 DDI1Q8WTU0 396 aa18.39■□□□□ 0.53
TMEM53-209ENST00000495630 CIPCQ9C0C6 399 aa18.39■□□□□ 0.53
TMEM53-209ENST00000495630 APOBEC3GQ9HC16 384 aaKnown RBP18.39■□□□□ 0.53
TMEM53-209ENST00000495630 EXOC1Q9NV70 894 aa18.39■□□□□ 0.53
TMEM53-209ENST00000495630 MARCH2Q9P0N8 246 aa18.39■□□□□ 0.53
TMEM53-209ENST00000495630 CLEC4EQ9ULY5 219 aa18.39■□□□□ 0.53
TMEM53-209ENST00000495630 PCDHA7Q9UN72 937 aa18.39■□□□□ 0.53
TMEM53-209ENST00000495630 PDIA4P13667 645 aaKnown RBP18.38■□□□□ 0.53
TMEM53-209ENST00000495630 TEAD4Q15561 434 aa18.38■□□□□ 0.53
TMEM53-209ENST00000495630 KMT5BQ4FZB7 885 aa18.38■□□□□ 0.53
TMEM53-209ENST00000495630 TMEM215Q68D42 235 aa18.38■□□□□ 0.53
TMEM53-209ENST00000495630 FAM217AQ8IXS0 508 aa18.38■□□□□ 0.53
TMEM53-209ENST00000495630 GRAMD1CQ8IYS0 662 aa18.38■□□□□ 0.53
TMEM53-209ENST00000495630 SORCS1Q8WY21 1168 aa18.38■□□□□ 0.53
TMEM53-209ENST00000495630 FAXDC2Q96IV6 333 aa18.38■□□□□ 0.53
TMEM53-209ENST00000495630 HEXIM2Q96MH2 286 aaKnown RBP18.38■□□□□ 0.53
TMEM53-209ENST00000495630 NIF3L1Q9GZT8 377 aa18.38■□□□□ 0.53
TMEM53-209ENST00000495630 PLA2G4CQ9UP65 541 aa18.38■□□□□ 0.53
TMEM53-209ENST00000495630 TRAF3IP3Q9Y228 551 aa18.38■□□□□ 0.53
TMEM53-209ENST00000495630 PLXNB3Q9ULL4 1909 aa18.38■□□□□ 0.53
TMEM53-209ENST00000495630 SLC12A8A0AV02 714 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms