RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 RRM1P23921 792 aa20.23■□□□□ 0.83
HDAC4-212ENST00000495497 CTHP32929 405 aa20.23■□□□□ 0.83
HDAC4-212ENST00000495497 HARS2P49590 506 aaKnown RBP20.23■□□□□ 0.83
HDAC4-212ENST00000495497 SULT1E1P49888 294 aa20.23■□□□□ 0.83
HDAC4-212ENST00000495497 NME3Q13232 169 aa20.23■□□□□ 0.83
HDAC4-212ENST00000495497 GAB4Q2WGN9 574 aa20.23■□□□□ 0.83
HDAC4-212ENST00000495497 ZC3H12AQ5D1E8 599 aaKnown RBP20.23■□□□□ 0.83
HDAC4-212ENST00000495497 TMEM31Q5JXX7 168 aa20.23■□□□□ 0.83
HDAC4-212ENST00000495497 ZNF852Q6ZMS4 543 aa20.23■□□□□ 0.83
HDAC4-212ENST00000495497 FAM3CQ92520 227 aa20.23■□□□□ 0.83
HDAC4-212ENST00000495497 OTUB2Q96DC9 234 aa20.23■□□□□ 0.83
HDAC4-212ENST00000495497 P2RY11Q96G91 374 aa20.23■□□□□ 0.83
HDAC4-212ENST00000495497 SLC39A13Q96H72 371 aa20.23■□□□□ 0.83
HDAC4-212ENST00000495497 SHDQ96IW2 340 aa20.23■□□□□ 0.83
HDAC4-212ENST00000495497 CFAP57Q96MR6 1250 aa20.23■□□□□ 0.83
HDAC4-212ENST00000495497 TBCBQ99426 244 aa20.23■□□□□ 0.83
HDAC4-212ENST00000495497 CHP1Q99653 195 aa20.23■□□□□ 0.83
HDAC4-212ENST00000495497 DDX23Q9BUQ8 820 aaKnown RBP20.23■□□□□ 0.83
HDAC4-212ENST00000495497 C1QTNF1Q9BXJ1 281 aa20.23■□□□□ 0.83
HDAC4-212ENST00000495497 SPHK2Q9NRA0 654 aa20.23■□□□□ 0.83
HDAC4-212ENST00000495497 ZNHIT6Q9NWK9 470 aaKnown RBP20.23■□□□□ 0.83
HDAC4-212ENST00000495497 DDIT4Q9NX09 232 aa20.23■□□□□ 0.83
HDAC4-212ENST00000495497 WDR35Q9P2L0 1181 aa20.23■□□□□ 0.83
HDAC4-212ENST00000495497 NDRG2Q9UN36 371 aaKnown RBP20.23■□□□□ 0.83
HDAC4-212ENST00000495497 TLR6Q9Y2C9 796 aa20.23■□□□□ 0.83
HDAC4-212ENST00000495497 ZNF510Q9Y2H8 683 aa20.23■□□□□ 0.83
HDAC4-212ENST00000495497 GOLGA6L7A0A1B0GV03 622 aa20.22■□□□□ 0.83
HDAC4-212ENST00000495497 TCRBV5S1A1TA0A578 114 aa20.22■□□□□ 0.83
HDAC4-212ENST00000495497 KANSL1LA0AUZ9 987 aa20.22■□□□□ 0.83
HDAC4-212ENST00000495497 M0QYT0 321 aa20.22■□□□□ 0.83
HDAC4-212ENST00000495497 PI15O43692 258 aa20.22■□□□□ 0.83
HDAC4-212ENST00000495497 MOCS2O96007 188 aaPredicted RBP20.22■□□□□ 0.83
HDAC4-212ENST00000495497 KRT3P12035 628 aa20.22■□□□□ 0.83
HDAC4-212ENST00000495497 GSCP56915 257 aaPredicted RBP20.22■□□□□ 0.83
HDAC4-212ENST00000495497 NR1H3Q13133 447 aa20.22■□□□□ 0.83
HDAC4-212ENST00000495497 EIF4EBP2Q13542 120 aaPredicted RBP20.22■□□□□ 0.83
HDAC4-212ENST00000495497 UBXN2BQ14CS0 331 aa20.22■□□□□ 0.83
HDAC4-212ENST00000495497 PON2Q15165 354 aa20.22■□□□□ 0.83
HDAC4-212ENST00000495497 TSR1Q2NL82 804 aaKnown RBP20.22■□□□□ 0.83
HDAC4-212ENST00000495497 ANO4Q32M45 955 aa20.22■□□□□ 0.83
HDAC4-212ENST00000495497 DNAJC24Q6P3W2 148 aa20.22■□□□□ 0.83
HDAC4-212ENST00000495497 RALGPS2Q86X27 583 aaPredicted RBP20.22■□□□□ 0.83
HDAC4-212ENST00000495497 CNGA4Q8IV77 575 aa20.22■□□□□ 0.83
HDAC4-212ENST00000495497 DRC7Q8IY82 874 aa20.22■□□□□ 0.83
HDAC4-212ENST00000495497 TC2NQ8N9U0 490 aa20.22■□□□□ 0.83
HDAC4-212ENST00000495497 C3orf20Q8ND61 904 aa20.22■□□□□ 0.83
HDAC4-212ENST00000495497 RXFP2Q8WXD0 754 aa20.22■□□□□ 0.83
HDAC4-212ENST00000495497 NPY6RQ99463 290 aa20.22■□□□□ 0.83
HDAC4-212ENST00000495497 SELENOOQ9BVL4 669 aa20.22■□□□□ 0.83
HDAC4-212ENST00000495497 XPO7Q9UIA9 1087 aaKnown RBP20.22■□□□□ 0.83
HDAC4-212ENST00000495497 MAN2B1O00754 1011 aa20.21■□□□□ 0.83
HDAC4-212ENST00000495497 TSPAN3O60637 253 aa20.21■□□□□ 0.83
HDAC4-212ENST00000495497 ADH5P11766 374 aa20.21■□□□□ 0.83
HDAC4-212ENST00000495497 GLULP15104 373 aa20.21■□□□□ 0.83
HDAC4-212ENST00000495497 TARSP26639 723 aaKnown RBP20.21■□□□□ 0.83
HDAC4-212ENST00000495497 GBP1P32455 592 aa20.21■□□□□ 0.83
HDAC4-212ENST00000495497 RFC1P35251 1148 aaPredicted RBP20.21■□□□□ 0.83
HDAC4-212ENST00000495497 SLC6A11P48066 632 aa20.21■□□□□ 0.83
HDAC4-212ENST00000495497 ATXN1P54253 815 aaKnown RBP20.21■□□□□ 0.83
HDAC4-212ENST00000495497 MLLT6P55198 1093 aaPredicted RBP20.21■□□□□ 0.83
HDAC4-212ENST00000495497 GFPT1Q06210 699 aaPredicted RBP20.21■□□□□ 0.83
HDAC4-212ENST00000495497 RING1Q06587 406 aa20.21■□□□□ 0.83
HDAC4-212ENST00000495497 NNTQ13423 1086 aa20.21■□□□□ 0.83
HDAC4-212ENST00000495497 RAB6CQ53S08 254 aa20.21■□□□□ 0.83
HDAC4-212ENST00000495497 BMP8AQ7Z5Y6 402 aa20.21■□□□□ 0.83
HDAC4-212ENST00000495497 VPS36Q86VN1 386 aa20.21■□□□□ 0.83
HDAC4-212ENST00000495497 C12orf40Q86WS4 652 aa20.21■□□□□ 0.83
HDAC4-212ENST00000495497 UNC45BQ8IWX7 931 aa20.21■□□□□ 0.83
HDAC4-212ENST00000495497 NAT16Q8N8M0 369 aa20.21■□□□□ 0.83
HDAC4-212ENST00000495497 BHMTQ93088 406 aa20.21■□□□□ 0.83
HDAC4-212ENST00000495497 NT5C3BQ969T7 300 aa20.21■□□□□ 0.83
HDAC4-212ENST00000495497 LRFN3Q9BTN0 628 aa20.21■□□□□ 0.83
HDAC4-212ENST00000495497 RAB6CQ9H0N0 254 aa20.21■□□□□ 0.83
HDAC4-212ENST00000495497 ISCUQ9H1K1 167 aa20.21■□□□□ 0.83
HDAC4-212ENST00000495497 FBRSL1Q9HCM7 1045 aaKnown RBP20.21■□□□□ 0.83
HDAC4-212ENST00000495497 LTB4R2Q9NPC1 389 aa20.21■□□□□ 0.83
HDAC4-212ENST00000495497 PLK2Q9NYY3 685 aa20.21■□□□□ 0.83
HDAC4-212ENST00000495497 STAP1Q9ULZ2 295 aa20.21■□□□□ 0.83
HDAC4-212ENST00000495497 CUL9Q8IWT3 2517 aa20.2■□□□□ 0.82
HDAC4-212ENST00000495497 SIGLEC16A6NMB1 481 aa20.2■□□□□ 0.82
HDAC4-212ENST00000495497 FAM170BA6NMN3 283 aa20.2■□□□□ 0.82
HDAC4-212ENST00000495497 PRR33A8MZF0 331 aa20.2■□□□□ 0.82
HDAC4-212ENST00000495497 ADH1CP00326 375 aa20.2■□□□□ 0.82
HDAC4-212ENST00000495497 PDGFRAP16234 1089 aa20.2■□□□□ 0.82
HDAC4-212ENST00000495497 GALK1P51570 392 aa20.2■□□□□ 0.82
HDAC4-212ENST00000495497 RPL7AP62424 266 aaKnown RBP20.2■□□□□ 0.82
HDAC4-212ENST00000495497 ATP11AP98196 1134 aa20.2■□□□□ 0.82
HDAC4-212ENST00000495497 GAD2Q05329 585 aa20.2■□□□□ 0.82
HDAC4-212ENST00000495497 C15orf59Q2T9L4 293 aaPredicted RBP20.2■□□□□ 0.82
HDAC4-212ENST00000495497 ASTE1Q2TB18 679 aaPredicted RBP20.2■□□□□ 0.82
HDAC4-212ENST00000495497 SLC25A52Q3SY17 297 aa20.2■□□□□ 0.82
HDAC4-212ENST00000495497 CCDC14Q49A88 953 aa20.2■□□□□ 0.82
HDAC4-212ENST00000495497 CCDC122Q5T0U0 273 aa20.2■□□□□ 0.82
HDAC4-212ENST00000495497 SH3PXD2AQ5TCZ1 1133 aa20.2■□□□□ 0.82
HDAC4-212ENST00000495497 NUGGCQ68CJ6 796 aa20.2■□□□□ 0.82
HDAC4-212ENST00000495497 NADSYN1Q6IA69 706 aa20.2■□□□□ 0.82
HDAC4-212ENST00000495497 PPP1R2P3Q6NXS1 205 aa20.2■□□□□ 0.82
HDAC4-212ENST00000495497 FBXL6Q8N531 539 aa20.2■□□□□ 0.82
HDAC4-212ENST00000495497 RNF34Q969K3 372 aa20.2■□□□□ 0.82
HDAC4-212ENST00000495497 ZNF653Q96CK0 615 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms