RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 KAT7O95251 611 aa16.6■□□□□ 0.25
LIME1-209ENST00000494776 SP9P0CG40 484 aa16.6■□□□□ 0.25
LIME1-209ENST00000494776 FERP16591 822 aa16.6■□□□□ 0.25
LIME1-209ENST00000494776 GRIA2P42262 883 aa16.6■□□□□ 0.25
LIME1-209ENST00000494776 SLC11A2P49281 568 aa16.6■□□□□ 0.25
LIME1-209ENST00000494776 SEC13P55735 322 aa16.6■□□□□ 0.25
LIME1-209ENST00000494776 CDK17Q00537 523 aa16.6■□□□□ 0.25
LIME1-209ENST00000494776 GAS6Q14393 721 aa16.6■□□□□ 0.25
LIME1-209ENST00000494776 NR1I3Q14994 352 aa16.6■□□□□ 0.25
LIME1-209ENST00000494776 GRAMD4Q6IC98 578 aa16.6■□□□□ 0.25
LIME1-209ENST00000494776 TSSK4Q6SA08 328 aa16.6■□□□□ 0.25
LIME1-209ENST00000494776 LRSAM1Q6UWE0 723 aa16.6■□□□□ 0.25
LIME1-209ENST00000494776 TRIM72Q6ZMU5 477 aa16.6■□□□□ 0.25
LIME1-209ENST00000494776 MAMSTRQ6ZN01 415 aa16.6■□□□□ 0.25
LIME1-209ENST00000494776 TAC4Q86UU9 113 aa16.6■□□□□ 0.25
LIME1-209ENST00000494776 DEFB106AQ8N104 65 aa16.6■□□□□ 0.25
LIME1-209ENST00000494776 DDI1Q8WTU0 396 aa16.6■□□□□ 0.25
LIME1-209ENST00000494776 PIWIL1Q96J94 861 aaKnown RBP16.6■□□□□ 0.25
LIME1-209ENST00000494776 FAM204AQ9H8W3 233 aa16.6■□□□□ 0.25
LIME1-209ENST00000494776 PLK2Q9NYY3 685 aa16.6■□□□□ 0.25
LIME1-209ENST00000494776 MARK1Q9P0L2 795 aa16.6■□□□□ 0.25
LIME1-209ENST00000494776 TLR6Q9Y2C9 796 aa16.6■□□□□ 0.25
LIME1-209ENST00000494776 CACNA1HO95180 2353 aa16.59■□□□□ 0.25
LIME1-209ENST00000494776 LATS1O95835 1130 aa16.59■□□□□ 0.25
LIME1-209ENST00000494776 TRUB2O95900 331 aaKnown RBP16.59■□□□□ 0.25
LIME1-209ENST00000494776 GBP1P32455 592 aa16.59■□□□□ 0.25
LIME1-209ENST00000494776 RNASE9P60153 205 aaKnown RBP16.59■□□□□ 0.25
LIME1-209ENST00000494776 NOMO3P69849 1222 aa16.59■□□□□ 0.25
LIME1-209ENST00000494776 FMO1Q01740 532 aa16.59■□□□□ 0.25
LIME1-209ENST00000494776 SATB1Q01826 763 aa16.59■□□□□ 0.25
LIME1-209ENST00000494776 RING1Q06587 406 aa16.59■□□□□ 0.25
LIME1-209ENST00000494776 OLFML1Q6UWY5 402 aa16.59■□□□□ 0.25
LIME1-209ENST00000494776 MAML2Q8IZL2 1156 aaPredicted RBP16.59■□□□□ 0.25
LIME1-209ENST00000494776 CPXM2Q8N436 756 aa16.59■□□□□ 0.25
LIME1-209ENST00000494776 RPLP0P6Q8NHW5 317 aa16.59■□□□□ 0.25
LIME1-209ENST00000494776 RNF34Q969K3 372 aa16.59■□□□□ 0.25
LIME1-209ENST00000494776 MYO6Q9UM54 1294 aa16.59■□□□□ 0.25
LIME1-209ENST00000494776 SLC8A2Q9UPR5 921 aa16.59■□□□□ 0.25
LIME1-209ENST00000494776 WDFY4Q6ZS81 3184 aa16.58■□□□□ 0.24
LIME1-209ENST00000494776 SYNJ2BP-COX16A0A087WUM0 186 aa16.58■□□□□ 0.24
LIME1-209ENST00000494776 K7EQS6 105 aa16.58■□□□□ 0.24
LIME1-209ENST00000494776 CACNG3O60359 315 aa16.58■□□□□ 0.24
LIME1-209ENST00000494776 TSPAN3O60637 253 aa16.58■□□□□ 0.24
LIME1-209ENST00000494776 MOCS2O96007 188 aaPredicted RBP16.58■□□□□ 0.24
LIME1-209ENST00000494776 IGLV3-27P01718 113 aa16.58■□□□□ 0.24
LIME1-209ENST00000494776 APOEP02649 317 aa16.58■□□□□ 0.24
LIME1-209ENST00000494776 TPM3P06753 285 aa16.58■□□□□ 0.24
LIME1-209ENST00000494776 CHRNB2P17787 502 aa16.58■□□□□ 0.24
LIME1-209ENST00000494776 GABRB2P47870 512 aa16.58■□□□□ 0.24
LIME1-209ENST00000494776 DGKGP49619 791 aa16.58■□□□□ 0.24
LIME1-209ENST00000494776 ZNF445P59923 1031 aa16.58■□□□□ 0.24
LIME1-209ENST00000494776 NNTQ13423 1086 aa16.58■□□□□ 0.24
LIME1-209ENST00000494776 ZNF528Q3MIS6 628 aa16.58■□□□□ 0.24
LIME1-209ENST00000494776 MPPE1Q53F39 396 aa16.58■□□□□ 0.24
LIME1-209ENST00000494776 C2orf27AQ580R0 203 aa16.58■□□□□ 0.24
LIME1-209ENST00000494776 ADGRF1Q5T601 910 aa16.58■□□□□ 0.24
LIME1-209ENST00000494776 FAM102AQ5T9C2 384 aaPredicted RBP16.58■□□□□ 0.24
LIME1-209ENST00000494776 ZC3H14Q6PJT7 736 aaKnown RBP16.58■□□□□ 0.24
LIME1-209ENST00000494776 SLC26A9Q7LBE3 791 aa16.58■□□□□ 0.24
LIME1-209ENST00000494776 ETFBKMTQ8IXQ9 262 aa16.58■□□□□ 0.24
LIME1-209ENST00000494776 EZH1Q92800 747 aaPredicted RBP16.58■□□□□ 0.24
LIME1-209ENST00000494776 ACDQ96AP0 544 aa16.58■□□□□ 0.24
LIME1-209ENST00000494776 SLC2A13Q96QE2 648 aa16.58■□□□□ 0.24
LIME1-209ENST00000494776 DDX50Q9BQ39 737 aaKnown RBP16.58■□□□□ 0.24
LIME1-209ENST00000494776 PRMT8Q9NR22 394 aaPredicted RBP16.58■□□□□ 0.24
LIME1-209ENST00000494776 DDIT4Q9NX09 232 aa16.58■□□□□ 0.24
LIME1-209ENST00000494776 COX16Q9P0S2 106 aa16.58■□□□□ 0.24
LIME1-209ENST00000494776 IFNKQ9P0W0 207 aa16.58■□□□□ 0.24
LIME1-209ENST00000494776 SLC12A6Q9UHW9 1150 aa16.58■□□□□ 0.24
LIME1-209ENST00000494776 LRRC53A6NM62 1247 aa16.57■□□□□ 0.24
LIME1-209ENST00000494776 GOLGA8SH3BPF8 625 aa16.57■□□□□ 0.24
LIME1-209ENST00000494776 ACSL4O60488 711 aa16.57■□□□□ 0.24
LIME1-209ENST00000494776 DAB1O75553 588 aa16.57■□□□□ 0.24
LIME1-209ENST00000494776 CYP1A1P04798 512 aaPredicted RBP16.57■□□□□ 0.24
LIME1-209ENST00000494776 NOS2P35228 1153 aa16.57■□□□□ 0.24
LIME1-209ENST00000494776 TNFRSF4P43489 277 aa16.57■□□□□ 0.24
LIME1-209ENST00000494776 NSFP46459 744 aaKnown RBP16.57■□□□□ 0.24
LIME1-209ENST00000494776 NRLP54845 237 aa16.57■□□□□ 0.24
LIME1-209ENST00000494776 ASIC2Q16515 512 aa16.57■□□□□ 0.24
LIME1-209ENST00000494776 C2CD6Q53TS8 623 aa16.57■□□□□ 0.24
LIME1-209ENST00000494776 ZC3H12AQ5D1E8 599 aaKnown RBP16.57■□□□□ 0.24
LIME1-209ENST00000494776 C10orf76Q5T2E6 689 aa16.57■□□□□ 0.24
LIME1-209ENST00000494776 SFMBT2Q5VUG0 894 aa16.57■□□□□ 0.24
LIME1-209ENST00000494776 PKN3Q6P5Z2 889 aa16.57■□□□□ 0.24
LIME1-209ENST00000494776 XYLT1Q86Y38 959 aa16.57■□□□□ 0.24
LIME1-209ENST00000494776 ZNF397Q8NF99 534 aaPredicted RBP16.57■□□□□ 0.24
LIME1-209ENST00000494776 SLC30A5Q8TAD4 765 aa16.57■□□□□ 0.24
LIME1-209ENST00000494776 ATRIPQ8WXE1 791 aa16.57■□□□□ 0.24
LIME1-209ENST00000494776 TMA16Q96EY4 203 aaKnown RBP16.57■□□□□ 0.24
LIME1-209ENST00000494776 FCRL2Q96LA5 508 aaPredicted RBP16.57■□□□□ 0.24
LIME1-209ENST00000494776 AGPAT1Q99943 283 aa16.57■□□□□ 0.24
LIME1-209ENST00000494776 NUP58Q9BVL2 599 aa16.57■□□□□ 0.24
LIME1-209ENST00000494776 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.57■□□□□ 0.24
LIME1-209ENST00000494776 GOLGA6L7A0A1B0GV03 622 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 TYW5A2RUC4 315 aaKnown RBP16.56■□□□□ 0.24
LIME1-209ENST00000494776 CHURC1-FNTBB4DL54 471 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 TRIM24O15164 1050 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 IRAK2O43187 625 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 PENKP01210 267 aaPredicted RBP16.56■□□□□ 0.24
LIME1-209ENST00000494776 SLC2A3P11169 496 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms