RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 CLEC4CQ8WTT0 213 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 EDEM1Q92611 657 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 PIGKQ92643 395 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 SPACA7Q96KW9 195 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 XPO6Q96QU8 1125 aaKnown RBP12.2□□□□□ -0.46
VTI1A-208ENST00000494728 GABRG3Q99928 467 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 UBXN6Q9BZV1 441 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 MARCH2Q9P0N8 246 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 WDR35Q9P2L0 1181 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 IGHV1OR15-9A0A0B4J2B8 117 aa12.19□□□□□ -0.46
VTI1A-208ENST00000494728 SLC12A8A0AV02 714 aa12.19□□□□□ -0.46
VTI1A-208ENST00000494728 GFRA2O00451 464 aa12.19□□□□□ -0.46
VTI1A-208ENST00000494728 PSMA7O14818 248 aa12.19□□□□□ -0.46
VTI1A-208ENST00000494728 IL12RB1P42701 662 aa12.19□□□□□ -0.46
VTI1A-208ENST00000494728 RGS7P49802 495 aa12.19□□□□□ -0.46
VTI1A-208ENST00000494728 SGSHP51688 502 aa12.19□□□□□ -0.46
VTI1A-208ENST00000494728 STX17P56962 302 aa12.19□□□□□ -0.46
VTI1A-208ENST00000494728 N4BP2L1Q5TBK1 243 aaPredicted RBP12.19□□□□□ -0.46
VTI1A-208ENST00000494728 TMEM215Q68D42 235 aa12.19□□□□□ -0.46
VTI1A-208ENST00000494728 TMEM270Q6UE05 265 aa12.19□□□□□ -0.46
VTI1A-208ENST00000494728 C11orf74Q86VG3 221 aa12.19□□□□□ -0.46
VTI1A-208ENST00000494728 FMNL3Q8IVF7 1028 aa12.19□□□□□ -0.46
VTI1A-208ENST00000494728 SLC41A1Q8IVJ1 513 aa12.19□□□□□ -0.46
VTI1A-208ENST00000494728 FAM217AQ8IXS0 508 aa12.19□□□□□ -0.46
VTI1A-208ENST00000494728 PGBD3Q8N328 593 aa12.19□□□□□ -0.46
VTI1A-208ENST00000494728 KCNV2Q8TDN2 545 aa12.19□□□□□ -0.46
VTI1A-208ENST00000494728 NELFBQ8WX92 580 aa12.19□□□□□ -0.46
VTI1A-208ENST00000494728 SORCS1Q8WY21 1168 aa12.19□□□□□ -0.46
VTI1A-208ENST00000494728 CCDC34Q96HJ3 373 aa12.19□□□□□ -0.46
VTI1A-208ENST00000494728 PIWIL1Q96J94 861 aaKnown RBP12.19□□□□□ -0.46
VTI1A-208ENST00000494728 KREMEN1Q96MU8 473 aa12.19□□□□□ -0.46
VTI1A-208ENST00000494728 LSM14BQ9BX40 385 aaKnown RBP12.19□□□□□ -0.46
VTI1A-208ENST00000494728 FAM124BQ9H5Z6 455 aaPredicted RBP12.19□□□□□ -0.46
VTI1A-208ENST00000494728 SFMBT1Q9UHJ3 866 aa12.19□□□□□ -0.46
VTI1A-208ENST00000494728 CYP8B1Q9UNU6 501 aa12.19□□□□□ -0.46
VTI1A-208ENST00000494728 KCNK5O95279 499 aa12.18□□□□□ -0.46
VTI1A-208ENST00000494728 HOXD9P28356 352 aaPredicted RBP12.18□□□□□ -0.46
VTI1A-208ENST00000494728 PMLP29590 882 aa12.18□□□□□ -0.46
VTI1A-208ENST00000494728 ZNF132P52740 706 aa12.18□□□□□ -0.46
VTI1A-208ENST00000494728 DAOAP59103 153 aa12.18□□□□□ -0.46
VTI1A-208ENST00000494728 COG7P83436 770 aa12.18□□□□□ -0.46
VTI1A-208ENST00000494728 TRIP4Q15650 581 aaPredicted RBP12.18□□□□□ -0.46
VTI1A-208ENST00000494728 FUT11Q495W5 492 aa12.18□□□□□ -0.46
VTI1A-208ENST00000494728 CCDC40Q4G0X9 1142 aa12.18□□□□□ -0.46
VTI1A-208ENST00000494728 TRIM61Q5EBN2 209 aa12.18□□□□□ -0.46
VTI1A-208ENST00000494728 PEAR1Q5VY43 1037 aaPredicted RBP12.18□□□□□ -0.46
VTI1A-208ENST00000494728 LYSMD4Q5XG99 296 aa12.18□□□□□ -0.46
VTI1A-208ENST00000494728 PSAPL1Q6NUJ1 521 aa12.18□□□□□ -0.46
VTI1A-208ENST00000494728 PMF1Q6P1K2 205 aa12.18□□□□□ -0.46
VTI1A-208ENST00000494728 RSRC2Q7L4I2 434 aaKnown RBP12.18□□□□□ -0.46
VTI1A-208ENST00000494728 RRAGAQ7L523 313 aa12.18□□□□□ -0.46
VTI1A-208ENST00000494728 LPCAT2Q7L5N7 544 aa12.18□□□□□ -0.46
VTI1A-208ENST00000494728 TRMT11Q7Z4G4 463 aaKnown RBP12.18□□□□□ -0.46
VTI1A-208ENST00000494728 TADA2BQ86TJ2 420 aa12.18□□□□□ -0.46
VTI1A-208ENST00000494728 CACUL1Q86Y37 369 aa12.18□□□□□ -0.46
VTI1A-208ENST00000494728 TRIM59Q8IWR1 403 aa12.18□□□□□ -0.46
VTI1A-208ENST00000494728 PPM1KQ8N3J5 372 aa12.18□□□□□ -0.46
VTI1A-208ENST00000494728 WFDC5Q8TCV5 224 aa12.18□□□□□ -0.46
VTI1A-208ENST00000494728 DHTKD1Q96HY7 919 aaPredicted RBP12.18□□□□□ -0.46
VTI1A-208ENST00000494728 MRGPRX1Q96LB2 322 aa12.18□□□□□ -0.46
VTI1A-208ENST00000494728 CEP63Q96MT8 703 aa12.18□□□□□ -0.46
VTI1A-208ENST00000494728 MED15Q96RN5 788 aa12.18□□□□□ -0.46
VTI1A-208ENST00000494728 CDK5RAP1Q96SZ6 601 aaKnown RBP12.18□□□□□ -0.46
VTI1A-208ENST00000494728 MKRN2Q9H000 416 aaKnown RBP12.18□□□□□ -0.46
VTI1A-208ENST00000494728 PILRBQ9UKJ0 227 aa12.18□□□□□ -0.46
VTI1A-208ENST00000494728 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.18□□□□□ -0.46
VTI1A-208ENST00000494728 SLC27A6Q9Y2P4 619 aa12.18□□□□□ -0.46
VTI1A-208ENST00000494728 STON1Q9Y6Q2 735 aa12.18□□□□□ -0.46
VTI1A-208ENST00000494728 PLXNA2O75051 1894 aa12.18□□□□□ -0.46
VTI1A-208ENST00000494728 CABIN1Q9Y6J0 2220 aa12.17□□□□□ -0.46
VTI1A-208ENST00000494728 M0QYV0 167 aa12.17□□□□□ -0.46
VTI1A-208ENST00000494728 KHNYNO15037 678 aaKnown RBP12.17□□□□□ -0.46
VTI1A-208ENST00000494728 PMM2O15305 246 aa12.17□□□□□ -0.46
VTI1A-208ENST00000494728 TSPAN3O60637 253 aa12.17□□□□□ -0.46
VTI1A-208ENST00000494728 SETSIPP0DME0 302 aa12.17□□□□□ -0.46
VTI1A-208ENST00000494728 VDRP11473 427 aa12.17□□□□□ -0.46
VTI1A-208ENST00000494728 LCP1P13796 627 aa12.17□□□□□ -0.46
VTI1A-208ENST00000494728 TBXAS1P24557 533 aaPredicted RBP12.17□□□□□ -0.46
VTI1A-208ENST00000494728 PRKCHP24723 683 aa12.17□□□□□ -0.46
VTI1A-208ENST00000494728 APBA1Q02410 837 aa12.17□□□□□ -0.46
VTI1A-208ENST00000494728 RPL6Q02878 288 aaKnown RBP12.17□□□□□ -0.46
VTI1A-208ENST00000494728 ENPP2Q13822 863 aa12.17□□□□□ -0.46
VTI1A-208ENST00000494728 PREPLQ4J6C6 727 aaPredicted RBP12.17□□□□□ -0.46
VTI1A-208ENST00000494728 BSPRYQ5W0U4 402 aa12.17□□□□□ -0.46
VTI1A-208ENST00000494728 LCLAT1Q6UWP7 414 aa12.17□□□□□ -0.46
VTI1A-208ENST00000494728 SYT12Q8IV01 421 aa12.17□□□□□ -0.46
VTI1A-208ENST00000494728 ELOA2Q8IYF1 753 aaPredicted RBP12.17□□□□□ -0.46
VTI1A-208ENST00000494728 ARHGAP18Q8N392 663 aa12.17□□□□□ -0.46
VTI1A-208ENST00000494728 CPXM2Q8N436 756 aa12.17□□□□□ -0.46
VTI1A-208ENST00000494728 OR2I1PQ8NGU4 316 aa12.17□□□□□ -0.46
VTI1A-208ENST00000494728 SLC35F5Q8WV83 523 aa12.17□□□□□ -0.46
VTI1A-208ENST00000494728 KCTD13Q8WZ19 329 aa12.17□□□□□ -0.46
VTI1A-208ENST00000494728 PLD4Q96BZ4 506 aa12.17□□□□□ -0.46
VTI1A-208ENST00000494728 MYEOVQ96EZ4 313 aa12.17□□□□□ -0.46
VTI1A-208ENST00000494728 NT5C1BQ96P26 610 aa12.17□□□□□ -0.46
VTI1A-208ENST00000494728 DCLK3Q9C098 648 aa12.17□□□□□ -0.46
VTI1A-208ENST00000494728 LRRC4Q9HBW1 653 aa12.17□□□□□ -0.46
VTI1A-208ENST00000494728 METTL14Q9HCE5 456 aaKnown RBP12.17□□□□□ -0.46
VTI1A-208ENST00000494728 TMEM9BQ9NQ34 198 aa12.17□□□□□ -0.46
VTI1A-208ENST00000494728 HESX1Q9UBX0 185 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms