RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 ZNF510Q9Y2H8 683 aa15.34■□□□□ 0.05
ATG4B-224ENST00000494132 HBS1LQ9Y450 684 aaKnown RBP15.34■□□□□ 0.05
ATG4B-224ENST00000494132 NUP205Q92621 2012 aa15.34■□□□□ 0.05
ATG4B-224ENST00000494132 PRRT4C9JH25 899 aa15.33■□□□□ 0.04
ATG4B-224ENST00000494132 SGK1O00141 431 aa15.33■□□□□ 0.04
ATG4B-224ENST00000494132 GRAP2O75791 330 aa15.33■□□□□ 0.04
ATG4B-224ENST00000494132 TPM2P07951 284 aa15.33■□□□□ 0.04
ATG4B-224ENST00000494132 ATP1A3P13637 1013 aa15.33■□□□□ 0.04
ATG4B-224ENST00000494132 CDK11BP21127 795 aaKnown RBP15.33■□□□□ 0.04
ATG4B-224ENST00000494132 KRT9P35527 623 aa15.33■□□□□ 0.04
ATG4B-224ENST00000494132 HARS2P49590 506 aaKnown RBP15.33■□□□□ 0.04
ATG4B-224ENST00000494132 DGKGP49619 791 aa15.33■□□□□ 0.04
ATG4B-224ENST00000494132 TBX4P57082 545 aa15.33■□□□□ 0.04
ATG4B-224ENST00000494132 POLR2FP61218 127 aaKnown RBP15.33■□□□□ 0.04
ATG4B-224ENST00000494132 PITX1P78337 314 aaPredicted RBP15.33■□□□□ 0.04
ATG4B-224ENST00000494132 MEA1Q16626 185 aa15.33■□□□□ 0.04
ATG4B-224ENST00000494132 ANO7Q6IWH7 933 aa15.33■□□□□ 0.04
ATG4B-224ENST00000494132 TMEM92Q6UXU6 159 aa15.33■□□□□ 0.04
ATG4B-224ENST00000494132 TMEM110Q86TL2 294 aa15.33■□□□□ 0.04
ATG4B-224ENST00000494132 ZNF513Q8N8E2 541 aaPredicted RBP15.33■□□□□ 0.04
ATG4B-224ENST00000494132 TSTD1Q8NFU3 115 aa15.33■□□□□ 0.04
ATG4B-224ENST00000494132 PPP1R13BQ96KQ4 1090 aa15.33■□□□□ 0.04
ATG4B-224ENST00000494132 PCMTD1Q96MG8 357 aaPredicted RBP15.33■□□□□ 0.04
ATG4B-224ENST00000494132 TPSD1Q9BZJ3 242 aa15.33■□□□□ 0.04
ATG4B-224ENST00000494132 EPC1Q9H2F5 836 aa15.33■□□□□ 0.04
ATG4B-224ENST00000494132 PDCL3Q9H2J4 239 aa15.33■□□□□ 0.04
ATG4B-224ENST00000494132 HCN2Q9UL51 889 aa15.33■□□□□ 0.04
ATG4B-224ENST00000494132 GVINP1Q7Z2Y8 2422 aa15.32■□□□□ 0.04
ATG4B-224ENST00000494132 GOLGA6L7A0A1B0GV03 622 aa15.32■□□□□ 0.04
ATG4B-224ENST00000494132 F8VZ95 297 aa15.32■□□□□ 0.04
ATG4B-224ENST00000494132 CAPN9O14815 690 aa15.32■□□□□ 0.04
ATG4B-224ENST00000494132 ERBB2P04626 1255 aa15.32■□□□□ 0.04
ATG4B-224ENST00000494132 CYP11B1P15538 503 aa15.32■□□□□ 0.04
ATG4B-224ENST00000494132 ZNF18P17022 549 aa15.32■□□□□ 0.04
ATG4B-224ENST00000494132 CHKAP35790 457 aa15.32■□□□□ 0.04
ATG4B-224ENST00000494132 SGSHP51688 502 aa15.32■□□□□ 0.04
ATG4B-224ENST00000494132 MRPS21P82921 87 aaKnown RBP15.32■□□□□ 0.04
ATG4B-224ENST00000494132 SIM2Q14190 667 aaPredicted RBP15.32■□□□□ 0.04
ATG4B-224ENST00000494132 SYCP1Q15431 976 aa15.32■□□□□ 0.04
ATG4B-224ENST00000494132 PTPN20Q4JDL3 420 aa15.32■□□□□ 0.04
ATG4B-224ENST00000494132 EGFLAMQ63HQ2 1017 aa15.32■□□□□ 0.04
ATG4B-224ENST00000494132 OR6B2Q6IFH4 312 aa15.32■□□□□ 0.04
ATG4B-224ENST00000494132 RFWD3Q6PCD5 774 aa15.32■□□□□ 0.04
ATG4B-224ENST00000494132 FAM183BPQ6ZVS7 135 aa15.32■□□□□ 0.04
ATG4B-224ENST00000494132 CEP68Q76N32 757 aa15.32■□□□□ 0.04
ATG4B-224ENST00000494132 TAC4Q86UU9 113 aa15.32■□□□□ 0.04
ATG4B-224ENST00000494132 ANKRD20A12PQ8NF67 263 aa15.32■□□□□ 0.04
ATG4B-224ENST00000494132 DDI1Q8WTU0 396 aa15.32■□□□□ 0.04
ATG4B-224ENST00000494132 STK32AQ8WU08 396 aa15.32■□□□□ 0.04
ATG4B-224ENST00000494132 ACOX2Q99424 681 aa15.32■□□□□ 0.04
ATG4B-224ENST00000494132 NCDNQ9UBB6 729 aa15.32■□□□□ 0.04
ATG4B-224ENST00000494132 LIMA1Q9UHB6 759 aaKnown RBP15.32■□□□□ 0.04
ATG4B-224ENST00000494132 MMP17Q9ULZ9 603 aa15.32■□□□□ 0.04
ATG4B-224ENST00000494132 INVSQ9Y283 1065 aa15.32■□□□□ 0.04
ATG4B-224ENST00000494132 SYNJ2BP-COX16A0A087WUM0 186 aa15.31■□□□□ 0.04
ATG4B-224ENST00000494132 A0A0A0MRY4 1105 aa15.31■□□□□ 0.04
ATG4B-224ENST00000494132 SYCE3A1L190 88 aa15.31■□□□□ 0.04
ATG4B-224ENST00000494132 AXIN1O15169 862 aa15.31■□□□□ 0.04
ATG4B-224ENST00000494132 ADAM23O75077 832 aa15.31■□□□□ 0.04
ATG4B-224ENST00000494132 GFPT2O94808 682 aa15.31■□□□□ 0.04
ATG4B-224ENST00000494132 MOCS2O96007 188 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-224ENST00000494132 PENKP01210 267 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-224ENST00000494132 CYBBP04839 570 aa15.31■□□□□ 0.04
ATG4B-224ENST00000494132 CISD3P0C7P0 127 aa15.31■□□□□ 0.04
ATG4B-224ENST00000494132 SLC6A4P31645 630 aa15.31■□□□□ 0.04
ATG4B-224ENST00000494132 TNFRSF4P43489 277 aa15.31■□□□□ 0.04
ATG4B-224ENST00000494132 DGKEP52429 567 aa15.31■□□□□ 0.04
ATG4B-224ENST00000494132 UBXN1Q04323 297 aa15.31■□□□□ 0.04
ATG4B-224ENST00000494132 CRY1Q16526 586 aa15.31■□□□□ 0.04
ATG4B-224ENST00000494132 C2CD6Q53TS8 623 aa15.31■□□□□ 0.04
ATG4B-224ENST00000494132 NOP9Q86U38 636 aaKnown RBP15.31■□□□□ 0.04
ATG4B-224ENST00000494132 WDR5BQ86VZ2 330 aa15.31■□□□□ 0.04
ATG4B-224ENST00000494132 DHX40Q8IX18 779 aaKnown RBP15.31■□□□□ 0.04
ATG4B-224ENST00000494132 CPXM2Q8N436 756 aa15.31■□□□□ 0.04
ATG4B-224ENST00000494132 SLC20A1Q8WUM9 679 aa15.31■□□□□ 0.04
ATG4B-224ENST00000494132 FCRL2Q96LA5 508 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-224ENST00000494132 STK33Q9BYT3 514 aa15.31■□□□□ 0.04
ATG4B-224ENST00000494132 COX16Q9P0S2 106 aa15.31■□□□□ 0.04
ATG4B-224ENST00000494132 SIK3Q9Y2K2 1263 aa15.31■□□□□ 0.04
ATG4B-224ENST00000494132 CKAP5Q14008 2032 aa15.31■□□□□ 0.04
ATG4B-224ENST00000494132 LGALS16A8MUM7 142 aa15.3■□□□□ 0.04
ATG4B-224ENST00000494132 DCLK1O15075 740 aa15.3■□□□□ 0.04
ATG4B-224ENST00000494132 SART1O43290 800 aaKnown RBP15.3■□□□□ 0.04
ATG4B-224ENST00000494132 RPP40O75818 363 aaKnown RBP15.3■□□□□ 0.04
ATG4B-224ENST00000494132 APBB3O95704 486 aa15.3■□□□□ 0.04
ATG4B-224ENST00000494132 IGLV3-27P01718 113 aa15.3■□□□□ 0.04
ATG4B-224ENST00000494132 MMEP08473 750 aa15.3■□□□□ 0.04
ATG4B-224ENST00000494132 BPIFB4P59827 614 aa15.3■□□□□ 0.04
ATG4B-224ENST00000494132 YWHAZP63104 245 aaKnown RBP15.3■□□□□ 0.04
ATG4B-224ENST00000494132 GEN1Q17RS7 908 aa15.3■□□□□ 0.04
ATG4B-224ENST00000494132 DCAF6Q58WW2 860 aa15.3■□□□□ 0.04
ATG4B-224ENST00000494132 NADSYN1Q6IA69 706 aa15.3■□□□□ 0.04
ATG4B-224ENST00000494132 APTXQ7Z2E3 356 aaKnown RBP15.3■□□□□ 0.04
ATG4B-224ENST00000494132 FAM217AQ8IXS0 508 aa15.3■□□□□ 0.04
ATG4B-224ENST00000494132 KIAA2013Q8IYS2 634 aa15.3■□□□□ 0.04
ATG4B-224ENST00000494132 DEFB106AQ8N104 65 aa15.3■□□□□ 0.04
ATG4B-224ENST00000494132 CAMKK1Q8N5S9 505 aa15.3■□□□□ 0.04
ATG4B-224ENST00000494132 MDGA1Q8NFP4 955 aa15.3■□□□□ 0.04
ATG4B-224ENST00000494132 CCDC26Q8TAB7 109 aa15.3■□□□□ 0.04
ATG4B-224ENST00000494132 RUBCNQ92622 972 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms