RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-223	ENST00000491295	NFE2L3	Q9Y4A8	694 aa		18.78	■□□□□ 0.6
GGA1-223	ENST00000491295	MAP1B	P46821	2468 aa	Known RBP	18.78	■□□□□ 0.6
GGA1-223	ENST00000491295	CEP192	Q8TEP8	1941 aa		18.78	■□□□□ 0.6
GGA1-223	ENST00000491295	GON4L	Q3T8J9	2241 aa		18.77	■□□□□ 0.6
GGA1-223	ENST00000491295	TBXAS1	P24557	533 aa	Predicted RBP	18.77	■□□□□ 0.6
GGA1-223	ENST00000491295	MAPK8	P45983	427 aa		18.77	■□□□□ 0.6
GGA1-223	ENST00000491295	HARS2	P49590	506 aa	Known RBP	18.77	■□□□□ 0.6
GGA1-223	ENST00000491295	BST2	Q10589	180 aa	Known RBP	18.77	■□□□□ 0.6
GGA1-223	ENST00000491295	SEMA3B	Q13214	749 aa		18.77	■□□□□ 0.6
GGA1-223	ENST00000491295	PNOC	Q13519	176 aa		18.77	■□□□□ 0.6
GGA1-223	ENST00000491295	HNRNPD	Q14103	355 aa	Known RBP	18.77	■□□□□ 0.6
GGA1-223	ENST00000491295	TRIP4	Q15650	581 aa	Predicted RBP	18.77	■□□□□ 0.6
GGA1-223	ENST00000491295	CBWD6	Q4V339	395 aa		18.77	■□□□□ 0.6
GGA1-223	ENST00000491295	DCAF17	Q5H9S7	520 aa	Predicted RBP	18.77	■□□□□ 0.6
GGA1-223	ENST00000491295	CBWD3	Q5JTY5	395 aa		18.77	■□□□□ 0.6
GGA1-223	ENST00000491295	CBWD5	Q5RIA9	395 aa		18.77	■□□□□ 0.6
GGA1-223	ENST00000491295	ANKS1B	Q7Z6G8	1248 aa		18.77	■□□□□ 0.6
GGA1-223	ENST00000491295	DENND1C	Q8IV53	801 aa		18.77	■□□□□ 0.6
GGA1-223	ENST00000491295	SCML4	Q8N228	414 aa		18.77	■□□□□ 0.6
GGA1-223	ENST00000491295	SPATA20	Q8TB22	786 aa		18.77	■□□□□ 0.6
GGA1-223	ENST00000491295	PIWIL1	Q96J94	861 aa	Known RBP	18.77	■□□□□ 0.6
GGA1-223	ENST00000491295	ARID3A	Q99856	593 aa		18.77	■□□□□ 0.6
GGA1-223	ENST00000491295	LRRC4	Q9HBW1	653 aa		18.77	■□□□□ 0.6
GGA1-223	ENST00000491295	METTL14	Q9HCE5	456 aa	Known RBP	18.77	■□□□□ 0.6
GGA1-223	ENST00000491295	ITM2C	Q9NQX7	267 aa		18.77	■□□□□ 0.6
GGA1-223	ENST00000491295	ELOVL2	Q9NXB9	296 aa		18.77	■□□□□ 0.6
GGA1-223	ENST00000491295	CYP8B1	Q9UNU6	501 aa		18.77	■□□□□ 0.6
GGA1-223	ENST00000491295	HBS1L	Q9Y450	684 aa	Known RBP	18.77	■□□□□ 0.6
GGA1-223	ENST00000491295	SLC12A8	A0AV02	714 aa		18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	ARHGAP33	O14559	1287 aa		18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	PMM2	O15305	246 aa		18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	PROS1	P07225	676 aa		18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	HMBS	P08397	361 aa		18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	VDR	P11473	427 aa		18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	GNS	P15586	552 aa		18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	OXTR	P30559	389 aa		18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	PPP1R2	P41236	205 aa		18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	PDE4C	Q08493	712 aa		18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	MPPE1	Q53F39	396 aa		18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	WDR45B	Q5MNZ6	344 aa		18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	ANKRD40	Q6AI12	368 aa		18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	PIP4P1	Q86T03	277 aa		18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	SLC41A1	Q8IVJ1	513 aa		18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	TRIML1	Q8N9V2	468 aa		18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	RNF139	Q8WU17	664 aa		18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	KCTD13	Q8WZ19	329 aa		18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	TIGD1	Q96MW7	591 aa		18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	IPO9	Q96P70	1041 aa	Known RBP	18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	IRX2	Q9BZI1	471 aa	Predicted RBP	18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	ULBP1	Q9BZM6	244 aa		18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	PRDM16	Q9HAZ2	1276 aa		18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	GDPD2	Q9HCC8	539 aa		18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	TSPAN16	Q9UKR8	245 aa		18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	WASF3	Q9UPY6	502 aa		18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	RAD54B	Q9Y620	910 aa		18.76	■□□□□ 0.59
GGA1-223	ENST00000491295	WASH3P	C4AMC7	463 aa		18.75	■□□□□ 0.59
GGA1-223	ENST00000491295	SYNCRIP	O60506	623 aa	Known RBP	18.75	■□□□□ 0.59
GGA1-223	ENST00000491295	OPHN1	O60890	802 aa		18.75	■□□□□ 0.59
GGA1-223	ENST00000491295	LATS1	O95835	1130 aa		18.75	■□□□□ 0.59
GGA1-223	ENST00000491295	SETSIP	P0DME0	302 aa		18.75	■□□□□ 0.59
GGA1-223	ENST00000491295	CD6	P30203	668 aa		18.75	■□□□□ 0.59
GGA1-223	ENST00000491295	RDX	P35241	583 aa	Known RBP	18.75	■□□□□ 0.59
GGA1-223	ENST00000491295	SLC14A1	Q13336	389 aa		18.75	■□□□□ 0.59
GGA1-223	ENST00000491295	STIM1	Q13586	685 aa		18.75	■□□□□ 0.59
GGA1-223	ENST00000491295	GEN1	Q17RS7	908 aa		18.75	■□□□□ 0.59
GGA1-223	ENST00000491295	GOLGA7B	Q2TAP0	167 aa		18.75	■□□□□ 0.59
GGA1-223	ENST00000491295	FUT11	Q495W5	492 aa		18.75	■□□□□ 0.59
GGA1-223	ENST00000491295	KIAA1324	Q6UXG2	1013 aa	Known RBP	18.75	■□□□□ 0.59
GGA1-223	ENST00000491295	DEFB119	Q8N690	84 aa		18.75	■□□□□ 0.59
GGA1-223	ENST00000491295	DEFB124	Q8NES8	71 aa		18.75	■□□□□ 0.59
GGA1-223	ENST00000491295	CADM4	Q8NFZ8	388 aa		18.75	■□□□□ 0.59
GGA1-223	ENST00000491295	DDI1	Q8WTU0	396 aa		18.75	■□□□□ 0.59
GGA1-223	ENST00000491295	SMARCE1	Q969G3	411 aa		18.75	■□□□□ 0.59
GGA1-223	ENST00000491295	HSPA12B	Q96MM6	686 aa		18.75	■□□□□ 0.59
GGA1-223	ENST00000491295	ZDHHC5	Q9C0B5	715 aa		18.75	■□□□□ 0.59
GGA1-223	ENST00000491295	CNGB3	Q9NQW8	809 aa		18.75	■□□□□ 0.59
GGA1-223	ENST00000491295	ABCC13	Q9NSE7	274 aa		18.75	■□□□□ 0.59
GGA1-223	ENST00000491295	DNAAF2	Q9NVR5	837 aa	Known RBP	18.75	■□□□□ 0.59
GGA1-223	ENST00000491295	STOML2	Q9UJZ1	356 aa		18.75	■□□□□ 0.59
GGA1-223	ENST00000491295	ASCC3	Q8N3C0	2202 aa	Known RBP	18.75	■□□□□ 0.59
GGA1-223	ENST00000491295	ATXN2	Q99700	1313 aa	Known RBP	18.74	■□□□□ 0.59
GGA1-223	ENST00000491295	PAEP	P09466	180 aa		18.74	■□□□□ 0.59
GGA1-223	ENST00000491295	IL12RB1	P42701	662 aa		18.74	■□□□□ 0.59
GGA1-223	ENST00000491295	FOXC1	Q12948	553 aa		18.74	■□□□□ 0.59
GGA1-223	ENST00000491295	BSPRY	Q5W0U4	402 aa		18.74	■□□□□ 0.59
GGA1-223	ENST00000491295	ELOA2	Q8IYF1	753 aa	Predicted RBP	18.74	■□□□□ 0.59
GGA1-223	ENST00000491295	RGL4	Q8IZJ4	473 aa		18.74	■□□□□ 0.59
GGA1-223	ENST00000491295	SIX6OS1	Q8N1H7	587 aa		18.74	■□□□□ 0.59
GGA1-223	ENST00000491295	ENGASE	Q8NFI3	743 aa		18.74	■□□□□ 0.59
GGA1-223	ENST00000491295	DNASE2B	Q8WZ79	361 aa		18.74	■□□□□ 0.59
GGA1-223	ENST00000491295	SLC35C1	Q96A29	364 aa		18.74	■□□□□ 0.59
GGA1-223	ENST00000491295	P2RY11	Q96G91	374 aa		18.74	■□□□□ 0.59
GGA1-223	ENST00000491295	DHTKD1	Q96HY7	919 aa	Predicted RBP	18.74	■□□□□ 0.59
GGA1-223	ENST00000491295	GTPBP2	Q9BX10	602 aa	Known RBP	18.74	■□□□□ 0.59
GGA1-223	ENST00000491295	WSB2	Q9NYS7	404 aa	Predicted RBP	18.74	■□□□□ 0.59
GGA1-223	ENST00000491295	USP36	Q9P275	1121 aa	Known RBP	18.74	■□□□□ 0.59
GGA1-223	ENST00000491295	PCNX2	A6NKB5	2137 aa		18.73	■□□□□ 0.59
GGA1-223	ENST00000491295	TMEM8B	A6NDV4	472 aa		18.73	■□□□□ 0.59
GGA1-223	ENST00000491295	PSMA7	O14818	248 aa		18.73	■□□□□ 0.59
GGA1-223	ENST00000491295	CD19	P15391	556 aa		18.73	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms