RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 CDH9Q9ULB4 789 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 SLC27A6Q9Y2P4 619 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 SNX9Q9Y5X1 595 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 E9PMD0 336 aa12.18□□□□□ -0.46
HDAC6-233ENST00000489352 FAM189A1O60320 539 aa12.18□□□□□ -0.46
HDAC6-233ENST00000489352 TNFSF15O95150 251 aa12.18□□□□□ -0.46
HDAC6-233ENST00000489352 IGHV4-34P06331 123 aa12.18□□□□□ -0.46
HDAC6-233ENST00000489352 CDC25AP30304 524 aa12.18□□□□□ -0.46
HDAC6-233ENST00000489352 POLR2BP30876 1174 aaKnown RBP12.18□□□□□ -0.46
HDAC6-233ENST00000489352 EVCP57679 992 aa12.18□□□□□ -0.46
HDAC6-233ENST00000489352 PSMC1P62191 440 aaKnown RBP12.18□□□□□ -0.46
HDAC6-233ENST00000489352 SFSWAPQ12872 951 aaKnown RBP12.18□□□□□ -0.46
HDAC6-233ENST00000489352 ECM1Q16610 540 aa12.18□□□□□ -0.46
HDAC6-233ENST00000489352 GEN1Q17RS7 908 aa12.18□□□□□ -0.46
HDAC6-233ENST00000489352 ISXQ2M1V0 245 aa12.18□□□□□ -0.46
HDAC6-233ENST00000489352 RINT1Q6NUQ1 792 aa12.18□□□□□ -0.46
HDAC6-233ENST00000489352 WASF1Q92558 559 aa12.18□□□□□ -0.46
HDAC6-233ENST00000489352 SERAC1Q96JX3 654 aa12.18□□□□□ -0.46
HDAC6-233ENST00000489352 C8orf48Q96LL4 319 aa12.18□□□□□ -0.46
HDAC6-233ENST00000489352 RUSC1Q9BVN2 902 aa12.18□□□□□ -0.46
HDAC6-233ENST00000489352 PLA2G4CQ9UP65 541 aa12.18□□□□□ -0.46
HDAC6-233ENST00000489352 PCDHGA8Q9Y5G5 932 aa12.18□□□□□ -0.46
HDAC6-233ENST00000489352 A0A0B4J269 797 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 VPS37CA5D8V6 355 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-233ENST00000489352 LRRC72A6NJI9 287 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 CDRT15L2A8MXV6 281 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 TRIM38O00635 465 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 HCRTO43612 131 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 TIMM44O43615 452 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 MAGEC1O60732 1142 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 SDC3O75056 442 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 ITGB3P05106 788 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 GP1BAP07359 652 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 KRT19P08727 400 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 PDGFRBP09619 1106 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 MLLT3P42568 568 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-233ENST00000489352 TRAPPC10P48553 1259 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 NXPH1P58417 271 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 MAPK7Q13164 816 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 EIF4HQ15056 248 aaKnown RBP12.17□□□□□ -0.46
HDAC6-233ENST00000489352 FNDC3BQ53EP0 1204 aaKnown RBP12.17□□□□□ -0.46
HDAC6-233ENST00000489352 C1orf186Q6ZWK4 172 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 ANKS1BQ7Z6G8 1248 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 OSTM1Q86WC4 334 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 NT5DC4Q86YG4 428 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 SRRM1Q8IYB3 904 aaKnown RBP12.17□□□□□ -0.46
HDAC6-233ENST00000489352 NUP93Q8N1F7 819 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 TOP6BLQ8N6T0 577 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 CACTINQ8WUQ7 758 aaKnown RBP12.17□□□□□ -0.46
HDAC6-233ENST00000489352 GOLGA1Q92805 767 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 ZNF274Q96GC6 653 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-233ENST00000489352 ATXN7L3BQ96GX2 97 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 ORAI3Q9BRQ5 295 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 ADNPQ9H2P0 1102 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 FBRSQ9HAH7 460 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 SEPT10Q9P0V9 454 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 LARSQ9P2J5 1176 aaKnown RBP12.17□□□□□ -0.46
HDAC6-233ENST00000489352 SNX14Q9Y5W7 946 aa12.17□□□□□ -0.46
HDAC6-233ENST00000489352 RP1L1Q8IWN7 2480 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-233ENST00000489352 A0A1B0GVM2 712 aa12.16□□□□□ -0.46
HDAC6-233ENST00000489352 ALPPL2P10696 532 aa12.16□□□□□ -0.46
HDAC6-233ENST00000489352 CKMT1AP12532 417 aa12.16□□□□□ -0.46
HDAC6-233ENST00000489352 TUBP50607 506 aa12.16□□□□□ -0.46
HDAC6-233ENST00000489352 MFAP3P55082 362 aa12.16□□□□□ -0.46
HDAC6-233ENST00000489352 TFAMQ00059 246 aaKnown RBP12.16□□□□□ -0.46
HDAC6-233ENST00000489352 CAMK2GQ13555 558 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-233ENST00000489352 ADALQ6DHV7 355 aa12.16□□□□□ -0.46
HDAC6-233ENST00000489352 C14orf80Q86SX3 495 aa12.16□□□□□ -0.46
HDAC6-233ENST00000489352 CSGALNACT2Q8N6G5 542 aa12.16□□□□□ -0.46
HDAC6-233ENST00000489352 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.16□□□□□ -0.46
HDAC6-233ENST00000489352 WDR36Q8NI36 951 aaKnown RBP12.16□□□□□ -0.46
HDAC6-233ENST00000489352 SNX29Q8TEQ0 813 aa12.16□□□□□ -0.46
HDAC6-233ENST00000489352 WBP2Q969T9 261 aa12.16□□□□□ -0.46
HDAC6-233ENST00000489352 PCED1BQ96HM7 432 aa12.16□□□□□ -0.46
HDAC6-233ENST00000489352 TJP2Q9UDY2 1190 aa12.16□□□□□ -0.46
HDAC6-233ENST00000489352 FBXO10Q9UK96 956 aa12.16□□□□□ -0.46
HDAC6-233ENST00000489352 PLAAQ9Y263 795 aa12.16□□□□□ -0.46
HDAC6-233ENST00000489352 ZFHX3Q15911 3703 aa12.16□□□□□ -0.46
HDAC6-233ENST00000489352 MED13Q9UHV7 2174 aa12.15□□□□□ -0.46
HDAC6-233ENST00000489352 WNT7AO00755 349 aa12.15□□□□□ -0.46
HDAC6-233ENST00000489352 GABRDO14764 452 aa12.15□□□□□ -0.46
HDAC6-233ENST00000489352 FFAR2O15552 330 aa12.15□□□□□ -0.46
HDAC6-233ENST00000489352 IL18RAPO95256 599 aa12.15□□□□□ -0.46
HDAC6-233ENST00000489352 CENPBP07199 599 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-233ENST00000489352 PLCG1P19174 1290 aa12.15□□□□□ -0.46
HDAC6-233ENST00000489352 GUCY2CP25092 1073 aa12.15□□□□□ -0.46
HDAC6-233ENST00000489352 GALCP54803 685 aa12.15□□□□□ -0.46
HDAC6-233ENST00000489352 RPS14P62263 151 aaKnown RBP12.15□□□□□ -0.46
HDAC6-233ENST00000489352 MDH1BQ5I0G3 518 aa12.15□□□□□ -0.46
HDAC6-233ENST00000489352 MANEAQ5SRI9 462 aa12.15□□□□□ -0.46
HDAC6-233ENST00000489352 FHL5Q5TD97 284 aa12.15□□□□□ -0.46
HDAC6-233ENST00000489352 NCEH1Q6PIU2 408 aa12.15□□□□□ -0.46
HDAC6-233ENST00000489352 DPH6Q7L8W6 267 aa12.15□□□□□ -0.46
HDAC6-233ENST00000489352 CLEC14AQ86T13 490 aa12.15□□□□□ -0.46
HDAC6-233ENST00000489352 JAMLQ86YT9 394 aa12.15□□□□□ -0.46
HDAC6-233ENST00000489352 LRRC52Q8N7C0 313 aa12.15□□□□□ -0.46
HDAC6-233ENST00000489352 OR4C6Q8NH72 309 aa12.15□□□□□ -0.46
HDAC6-233ENST00000489352 MYCBPAPQ8TBZ2 947 aa12.15□□□□□ -0.46
HDAC6-233ENST00000489352 SORCS1Q8WY21 1168 aa12.15□□□□□ -0.46
HDAC6-233ENST00000489352 TNFRSF25Q93038 417 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms