RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 PRKCSHP14314 528 aaPredicted RBP14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 GNA15P30679 374 aa14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 MPLP40238 635 aa14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 ACADSBP45954 432 aa14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 EXOC3L4Q17RC7 722 aa14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 AASDHQ4L235 1098 aaPredicted RBP14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 EGFLAMQ63HQ2 1017 aa14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 PMS2CLQ68D20 193 aa14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 TOGARAM2Q6ZUX3 1019 aa14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 ANKS1BQ7Z6G8 1248 aa14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 PGBD3Q8N328 593 aa14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 OLIG1Q8TAK6 271 aa14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 UCMAQ8WVF2 138 aa14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 HMGB4Q8WW32 186 aa14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 NDRG1Q92597 394 aaKnown RBP14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 EDEM1Q92611 657 aa14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 ZSWIM1Q9BR11 485 aa14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 SLC2A11Q9BYW1 496 aa14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 ZDHHC4Q9NPG8 344 aa14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 FBXO10Q9UK96 956 aa14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 CEP250Q9BV73 2442 aa14.42□□□□□ -0.1
SPTLC1-207ENST00000488921 GFRA2O00451 464 aa14.41□□□□□ -0.1
SPTLC1-207ENST00000488921 DCLK1O15075 740 aa14.41□□□□□ -0.1
SPTLC1-207ENST00000488921 HNRNPLP14866 589 aaKnown RBP eCLIP14.41□□□□□ -0.1
SPTLC1-207ENST00000488921 EIF4HQ15056 248 aaKnown RBP14.41□□□□□ -0.1
SPTLC1-207ENST00000488921 MAN2A1Q16706 1144 aa14.41□□□□□ -0.1
SPTLC1-207ENST00000488921 MPPE1Q53F39 396 aa14.41□□□□□ -0.1
SPTLC1-207ENST00000488921 PLA2G2CQ5R387 149 aa14.41□□□□□ -0.1
SPTLC1-207ENST00000488921 NUGGCQ68CJ6 796 aa14.41□□□□□ -0.1
SPTLC1-207ENST00000488921 CLEC17AQ6ZS10 378 aa14.41□□□□□ -0.1
SPTLC1-207ENST00000488921 UNC45BQ8IWX7 931 aa14.41□□□□□ -0.1
SPTLC1-207ENST00000488921 DDI1Q8WTU0 396 aa14.41□□□□□ -0.1
SPTLC1-207ENST00000488921 GABRG3Q99928 467 aa14.41□□□□□ -0.1
SPTLC1-207ENST00000488921 CRACR2AQ9BSW2 395 aa14.41□□□□□ -0.1
SPTLC1-207ENST00000488921 IRX2Q9BZI1 471 aaPredicted RBP14.41□□□□□ -0.1
SPTLC1-207ENST00000488921 ST7Q9NRC1 585 aa14.41□□□□□ -0.1
SPTLC1-207ENST00000488921 VPS45Q9NRW7 570 aa14.41□□□□□ -0.1
SPTLC1-207ENST00000488921 SFMBT1Q9UHJ3 866 aa14.41□□□□□ -0.1
SPTLC1-207ENST00000488921 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 PRRT4C9JH25 899 aa14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 PIK3R2O00459 728 aa14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 SLC30A4O14863 429 aa14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 THAP12O43422 761 aa14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 LETM1O95202 739 aaPredicted RBP14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 CISD3P0C7P0 127 aa14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 ERCC5P28715 1186 aaPredicted RBP14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 P2RY2P41231 377 aa14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 GPD2P43304 727 aa14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 RPL34P49207 117 aaKnown RBP14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 LIMK1P53667 647 aa14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 CREB5Q02930 508 aa14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 RING1Q06587 406 aa14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 NNTQ13423 1086 aa14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 DPCR1Q3MIW9 517 aa14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 CT47A1Q5JQC4 288 aaPredicted RBP14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 SPDYCQ5MJ68 293 aa14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 IRF2BP1Q8IU81 584 aa14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 STK32AQ8WU08 396 aa14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 SERPINB11Q96P15 392 aa14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 MED15Q96RN5 788 aa14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 MIS12Q9H081 205 aa14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 STOML2Q9UJZ1 356 aa14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 INVSQ9Y283 1065 aa14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 CKAP5Q14008 2032 aa14.4□□□□□ -0.1
SPTLC1-207ENST00000488921 ABCA7Q8IZY2 2146 aa14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 BCLAF3A2AJT9 711 aaKnown RBP14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 MAP3K13O43283 966 aa14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 MSI1O43347 362 aaKnown RBP14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 CAVIN2O95810 425 aa14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 CALCAP01258 141 aa14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 NCAM1P13591 858 aa14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 GABRG2P18507 467 aa14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 SLC9A1P19634 815 aa14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 USP8P40818 1118 aa14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 DPP6P42658 865 aa14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 WASP42768 502 aa14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 SLC11A2P49281 568 aa14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 ATXN1P54253 815 aaKnown RBP14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 STARD3Q14849 445 aa14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 SF3A2Q15428 464 aaKnown RBP14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 ARHGAP44Q17R89 818 aa14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 ADGRF1Q5T601 910 aa14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 LPCAT2Q7L5N7 544 aa14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 CYP2U1Q7Z449 544 aa14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 ZNF557Q8N988 423 aaPredicted RBP14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 IPO4Q8TEX9 1081 aaKnown RBP14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 CLEC4CQ8WTT0 213 aa14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 ZNF606Q8WXB4 792 aa14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 SHC3Q92529 594 aa14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 FAM149B1Q96BN6 582 aa14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 HCN2Q9UL51 889 aa14.39□□□□□ -0.11
SPTLC1-207ENST00000488921 SDK1Q7Z5N4 2213 aa14.38□□□□□ -0.11
SPTLC1-207ENST00000488921 CACNA1AO00555 2505 aa14.38□□□□□ -0.11
SPTLC1-207ENST00000488921 MUC22E2RYF6 1773 aaPredicted RBP14.38□□□□□ -0.11
SPTLC1-207ENST00000488921 A0A1W2PQF6 199 aa14.38□□□□□ -0.11
SPTLC1-207ENST00000488921 TYW5A2RUC4 315 aaKnown RBP14.38□□□□□ -0.11
SPTLC1-207ENST00000488921 CAPN9O14815 690 aa14.38□□□□□ -0.11
SPTLC1-207ENST00000488921 IRAK2O43187 625 aa14.38□□□□□ -0.11
SPTLC1-207ENST00000488921 ZNF217O75362 1048 aa14.38□□□□□ -0.11
SPTLC1-207ENST00000488921 GABBR2O75899 941 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms