RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 RAB20Q9NX57 234 aa16.69■□□□□ 0.26
MCF2L-229ENST00000488765 PLLPQ9Y342 182 aa16.69■□□□□ 0.26
MCF2L-229ENST00000488765 ATRNL1Q5VV63 1379 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 PSMD11O00231 422 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 RNASEH2AO75792 299 aaKnown RBP16.68■□□□□ 0.26
MCF2L-229ENST00000488765 CYP2C9P11712 490 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 ADRA2BP18089 450 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 DSG3P32926 999 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 PPARGP37231 505 aaPredicted RBP16.68■□□□□ 0.26
MCF2L-229ENST00000488765 LMNB2Q03252 620 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 SPIRE1Q08AE8 756 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 SP8Q8IXZ3 490 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 CAPSLQ8WWF8 208 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 RSAD2Q8WXG1 361 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 PPWD1Q96BP3 646 aaKnown RBP16.68■□□□□ 0.26
MCF2L-229ENST00000488765 TMA16Q96EY4 203 aaKnown RBP16.68■□□□□ 0.26
MCF2L-229ENST00000488765 TRPV6Q9H1D0 765 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 MARCH7Q9H992 704 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 AGTPBP1Q9UPW5 1226 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 SNX13Q9Y5W8 968 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 KRBA1A5PL33 1030 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 ZBTB14O43829 449 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 GRIN3BO60391 1043 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 FASTKD1Q53R41 847 aaKnown RBP16.68■□□□□ 0.26
MCF2L-229ENST00000488765 SPOPLQ6IQ16 392 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 CYP2R1Q6VVX0 501 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 CHSY1Q86X52 802 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 UNC45BQ8IWX7 931 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 ALKBH8Q96BT7 664 aaKnown RBP16.68■□□□□ 0.26
MCF2L-229ENST00000488765 POLE4Q9NR33 117 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 CNOT3O75175 753 aaKnown RBP16.68■□□□□ 0.26
MCF2L-229ENST00000488765 ZNF23P17027 643 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 HMOX2P30519 316 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 FSTL1Q12841 308 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 C1orf220Q5T0J3 134 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 GALNT18Q6P9A2 607 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 MAVSQ7Z434 540 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 UNC5BQ8IZJ1 945 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 ACTL9Q8TC94 416 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 AGAP3Q96P47 875 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 COA1Q9GZY4 146 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 DAPK2Q9UIK4 370 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 RAB26Q9ULW5 256 aa16.68■□□□□ 0.26
MCF2L-229ENST00000488765 BIRC5O15392 142 aa16.67■□□□□ 0.26
MCF2L-229ENST00000488765 MTA2O94776 668 aa16.67■□□□□ 0.26
MCF2L-229ENST00000488765 AOC1P19801 751 aa16.67■□□□□ 0.26
MCF2L-229ENST00000488765 RPL22P35268 128 aaKnown RBP16.67■□□□□ 0.26
MCF2L-229ENST00000488765 ADGRE1Q14246 886 aa16.67■□□□□ 0.26
MCF2L-229ENST00000488765 AARS2Q5JTZ9 985 aaKnown RBP16.67■□□□□ 0.26
MCF2L-229ENST00000488765 IL23RQ5VWK5 629 aa16.67■□□□□ 0.26
MCF2L-229ENST00000488765 RMND5BQ96G75 393 aaPredicted RBP16.67■□□□□ 0.26
MCF2L-229ENST00000488765 FERMT1Q9BQL6 677 aa16.67■□□□□ 0.26
MCF2L-229ENST00000488765 HAUS8Q9BT25 410 aa16.67■□□□□ 0.26
MCF2L-229ENST00000488765 KIFC3Q9BVG8 833 aa16.67■□□□□ 0.26
MCF2L-229ENST00000488765 PCDHAC1Q9H158 963 aa16.67■□□□□ 0.26
MCF2L-229ENST00000488765 MRGBPQ9NV56 204 aa16.67■□□□□ 0.26
MCF2L-229ENST00000488765 WRAP73Q9P2S5 460 aaPredicted RBP16.67■□□□□ 0.26
MCF2L-229ENST00000488765 PNMA6FA0A0J9YX94 578 aa16.67■□□□□ 0.26
MCF2L-229ENST00000488765 PROSCO94903 275 aa16.67■□□□□ 0.26
MCF2L-229ENST00000488765 H6PDO95479 791 aa16.67■□□□□ 0.26
MCF2L-229ENST00000488765 MFAP3P55082 362 aa16.67■□□□□ 0.26
MCF2L-229ENST00000488765 XIAPP98170 497 aa16.67■□□□□ 0.26
MCF2L-229ENST00000488765 MTX3Q5HYI7 312 aa16.67■□□□□ 0.26
MCF2L-229ENST00000488765 CLIP4Q8N3C7 705 aa16.67■□□□□ 0.26
MCF2L-229ENST00000488765 LRTOMTQ8WZ04 291 aa16.67■□□□□ 0.26
MCF2L-229ENST00000488765 JADE3Q92613 823 aa16.67■□□□□ 0.26
MCF2L-229ENST00000488765 KLHL32Q96NJ5 620 aa16.67■□□□□ 0.26
MCF2L-229ENST00000488765 GCOM2Q9BZD3 368 aaPredicted RBP16.67■□□□□ 0.26
MCF2L-229ENST00000488765 C1orf21Q9H246 121 aa16.67■□□□□ 0.26
MCF2L-229ENST00000488765 WDR55Q9H6Y2 383 aaPredicted RBP16.67■□□□□ 0.26
MCF2L-229ENST00000488765 CASQ2O14958 399 aaPredicted RBP16.66■□□□□ 0.26
MCF2L-229ENST00000488765 IREB2P48200 963 aaKnown RBP16.66■□□□□ 0.26
MCF2L-229ENST00000488765 MAPK11Q15759 364 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 CLEC16AQ2KHT3 1053 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 CIAPIN1Q6FI81 312 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 APOBEC3HQ6NTF7 200 aaKnown RBP16.66■□□□□ 0.26
MCF2L-229ENST00000488765 ZC3H7AQ8IWR0 971 aaKnown RBP16.66■□□□□ 0.26
MCF2L-229ENST00000488765 MOSPD1Q9UJG1 213 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 MYRFQ9Y2G1 1151 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 ATP8B3O60423 1300 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 UNCXA6NJT0 531 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 MSH4O15457 936 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 COX4I1P13073 169 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 ARL1P40616 181 aaPredicted RBP16.66■□□□□ 0.26
MCF2L-229ENST00000488765 CAMK2BQ13554 666 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 GPR180Q86V85 440 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.66■□□□□ 0.26
MCF2L-229ENST00000488765 TBC1D15Q8TC07 691 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 PIWIL2Q8TC59 973 aaKnown RBP16.66■□□□□ 0.26
MCF2L-229ENST00000488765 FAM110BQ8TC76 370 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 ATXN7L3BQ96GX2 97 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 SFMBT1Q9UHJ3 866 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 DGKBQ9Y6T7 804 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 BTAF1O14981 1849 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 LRP5O75197 1615 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 ESYT2A0FGR8 921 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 TOR1BO14657 336 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 TPST1O60507 370 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 IDH3AP50213 366 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 ESRRGP62508 458 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms