RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 HDAC7Q8WUI4 952 aa7.18□□□□□ -1.26
PDAP1-203ENST00000488214 POF1BQ8WVV4 589 aa7.18□□□□□ -1.26
PDAP1-203ENST00000488214 ANKRD7Q92527 254 aa7.18□□□□□ -1.26
PDAP1-203ENST00000488214 PGAP3Q96FM1 320 aaPredicted RBP7.18□□□□□ -1.26
PDAP1-203ENST00000488214 CEP295NLQ96MC4 621 aa7.18□□□□□ -1.26
PDAP1-203ENST00000488214 ZNF512Q96ME7 567 aaPredicted RBP7.18□□□□□ -1.26
PDAP1-203ENST00000488214 RUNDC3BQ96NL0 473 aa7.18□□□□□ -1.26
PDAP1-203ENST00000488214 TGS1Q96RS0 853 aaKnown RBP7.18□□□□□ -1.26
PDAP1-203ENST00000488214 HINFPQ9BQA5 517 aa7.18□□□□□ -1.26
PDAP1-203ENST00000488214 TTLL2Q9BWV7 592 aa7.18□□□□□ -1.26
PDAP1-203ENST00000488214 EMILIN2Q9BXX0 1053 aa7.18□□□□□ -1.26
PDAP1-203ENST00000488214 MAK16Q9BXY0 300 aaKnown RBP7.18□□□□□ -1.26
PDAP1-203ENST00000488214 PARD6BQ9BYG5 372 aa7.18□□□□□ -1.26
PDAP1-203ENST00000488214 TRIM31Q9BZY9 425 aa7.18□□□□□ -1.26
PDAP1-203ENST00000488214 NACA2Q9H009 215 aa7.18□□□□□ -1.26
PDAP1-203ENST00000488214 TKTL2Q9H0I9 626 aa7.18□□□□□ -1.26
PDAP1-203ENST00000488214 CCSER2Q9H7U1 834 aa7.18□□□□□ -1.26
PDAP1-203ENST00000488214 WDR6Q9NNW5 1121 aaKnown RBP7.18□□□□□ -1.26
PDAP1-203ENST00000488214 OLA1Q9NTK5 396 aaKnown RBP7.18□□□□□ -1.26
PDAP1-203ENST00000488214 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.18□□□□□ -1.26
PDAP1-203ENST00000488214 IL37Q9NZH6 218 aa7.18□□□□□ -1.26
PDAP1-203ENST00000488214 HSFX1Q9UBD0 423 aa7.18□□□□□ -1.26
PDAP1-203ENST00000488214 SFMBT1Q9UHJ3 866 aa7.18□□□□□ -1.26
PDAP1-203ENST00000488214 DMGDHQ9UI17 866 aaKnown RBP7.18□□□□□ -1.26
PDAP1-203ENST00000488214 FBXW11Q9UKB1 542 aa7.18□□□□□ -1.26
PDAP1-203ENST00000488214 LZTS1Q9Y250 596 aa7.18□□□□□ -1.26
PDAP1-203ENST00000488214 YBX2Q9Y2T7 364 aaKnown RBP7.18□□□□□ -1.26
PDAP1-203ENST00000488214 SLC12A8A0AV02 714 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 C2orf71A6NGG8 1288 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 HIDE1A8MVS5 230 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 C5orf67F2Z3F1 127 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 GRM6O15303 877 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 TGM5O43548 720 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 MFSD11O43934 449 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 TLR5O60602 858 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 LILRB3O75022 631 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 MAP3K6O95382 1288 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 GAS8O95995 478 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 F9P00740 461 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 C8AP07357 584 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 HMBSP08397 361 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 TGM2P21980 687 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 MCM3P25205 808 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 DNAJB1P25685 340 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 L1CAMP32004 1257 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 CCR1P32246 355 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 PBX2P40425 430 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 CXCR3P49682 368 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 VASPP50552 380 aaPredicted RBP7.17□□□□□ -1.26
PDAP1-203ENST00000488214 AIF1P55008 147 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 VCPP55072 806 aaKnown RBP7.17□□□□□ -1.26
PDAP1-203ENST00000488214 TBX4P57082 545 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 UBE3AQ05086 875 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 SCAPQ12770 1279 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 PPP2R2DQ66LE6 453 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 C1orf228Q6PIY5 440 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 CCDC149Q6ZUS6 474 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 MAATS1Q7Z4T9 603 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 ITIH5Q86UX2 942 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 VSIG1Q86XK7 387 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 PSTKQ8IV42 348 aaKnown RBP7.17□□□□□ -1.26
PDAP1-203ENST00000488214 TCEAL8Q8IYN2 117 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 KREMEN2Q8NCW0 462 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 ACTL9Q8TC94 416 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 SPPL3Q8TCT6 385 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 GRK7Q8WTQ7 553 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 OVCA2Q8WZ82 227 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 RUBCNQ92622 972 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 FAF2Q96CS3 445 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 SAMD11Q96NU1 681 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 KLHL5Q96PQ7 755 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 CSPG4P5Q96PW8 444 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 RNF157Q96PX1 679 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 CDK5RAP1Q96SZ6 601 aaKnown RBP7.17□□□□□ -1.26
PDAP1-203ENST00000488214 EPAS1Q99814 870 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 MAGEB5Q9BZ81 275 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 RAB17Q9H0T7 212 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 DPH5Q9H2P9 285 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 NKX2-4Q9H2Z4 354 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 WDCPQ9H6R7 721 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 LRRC19Q9H756 370 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 CERS4Q9HA82 394 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 TRPC7Q9HCX4 862 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 ANLNQ9NQW6 1124 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 HOMER3Q9NSC5 361 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 MTMR10Q9NXD2 777 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 CLIC5Q9NZA1 410 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 TRPM5Q9NZQ8 1165 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 MARCH2Q9P0N8 246 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 SAE1Q9UBE0 346 aaPredicted RBP7.17□□□□□ -1.26
PDAP1-203ENST00000488214 EFR3BQ9Y2G0 817 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 PCDHA11Q9Y5I1 949 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 SNX10Q9Y5X0 201 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 DOCK6Q96HP0 2047 aa7.17□□□□□ -1.26
PDAP1-203ENST00000488214 FAM187AA6NFU0 413 aa7.16□□□□□ -1.26
PDAP1-203ENST00000488214 ZNF487B1APH4 448 aa7.16□□□□□ -1.26
PDAP1-203ENST00000488214 I6L893 689 aaPredicted RBP7.16□□□□□ -1.26
PDAP1-203ENST00000488214 APOC4-APOC2K7ER74 178 aa7.16□□□□□ -1.26
PDAP1-203ENST00000488214 CCL16O15467 120 aa7.16□□□□□ -1.26
PDAP1-203ENST00000488214 DAPK3O43293 454 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms