RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 RASIP1Q5U651 963 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 STRA8Q7Z7C7 330 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 CHSY1Q86X52 802 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 SLC25A41Q8N5S1 370 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 PCSK9Q8NBP7 692 aaKnown RBP12.17□□□□□ -0.46
TRA2B-214ENST00000487615 DDX1Q92499 740 aaKnown RBP12.17□□□□□ -0.46
TRA2B-214ENST00000487615 TMEM120AQ9BXJ8 343 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 FAM124BQ9H5Z6 455 aaPredicted RBP12.17□□□□□ -0.46
TRA2B-214ENST00000487615 A0A0A0MRY4 1105 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 SMIM35A0A1B0GVV1 85 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 WDR27A2RRH5 827 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 LGR5O75473 907 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 MGAT1P26572 445 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 ASPAP45381 313 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 FKBP1BP68106 108 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 DRICH1Q6PGQ1 229 aaPredicted RBP12.16□□□□□ -0.46
TRA2B-214ENST00000487615 RGS9BPQ6ZS82 235 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 DTX3LQ8TDB6 740 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 SLC26A7Q8TE54 656 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 PRCCQ92733 491 aaPredicted RBP12.16□□□□□ -0.46
TRA2B-214ENST00000487615 CMTM5Q96DZ9 223 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 SPATA13Q96N96 652 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 BRD8Q9H0E9 1235 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 UPF3AQ9H1J1 476 aaKnown RBP12.16□□□□□ -0.46
TRA2B-214ENST00000487615 PCDH18Q9HCL0 1135 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 DMAP1Q9NPF5 467 aaPredicted RBP12.16□□□□□ -0.46
TRA2B-214ENST00000487615 GP5P40197 560 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 MPP3Q13368 585 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 VEPH1Q14D04 833 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 PDK4Q16654 411 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 TAS1R3Q7RTX0 852 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 C18orf25Q96B23 403 aaPredicted RBP12.16□□□□□ -0.46
TRA2B-214ENST00000487615 KIF9Q9HAQ2 790 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 PIH1D1Q9NWS0 290 aaKnown RBP12.16□□□□□ -0.46
TRA2B-214ENST00000487615 TUBGCP4Q9UGJ1 667 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 STARD13Q9Y3M8 1113 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 SMIM24O75264 130 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 DNAJC8O75937 253 aaPredicted RBP12.16□□□□□ -0.46
TRA2B-214ENST00000487615 CFHP08603 1231 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 MLH1P40692 756 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 TBCCQ15814 346 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 NFE2Q16621 373 aaPredicted RBP12.16□□□□□ -0.46
TRA2B-214ENST00000487615 C10orf120Q5SQS8 335 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 C9orf57Q5W0N0 161 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 TIGD7Q6NT04 549 aaPredicted RBP12.16□□□□□ -0.46
TRA2B-214ENST00000487615 FUKQ8N0W3 1084 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 TEKT4Q8WW24 435 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 ZBED3Q96IU2 234 aaPredicted RBP12.16□□□□□ -0.46
TRA2B-214ENST00000487615 PPP1R36Q96LQ0 422 aa12.16□□□□□ -0.46
TRA2B-214ENST00000487615 PIAS1O75925 651 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 PGAM1P18669 254 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 GRK2P25098 689 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 ERFP50548 548 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 CRYBB1P53674 252 aaPredicted RBP12.15□□□□□ -0.46
TRA2B-214ENST00000487615 AQP5P55064 265 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 LAMB3Q13751 1172 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 ANKRD20A2Q5SQ80 823 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 ANKRD20A1Q5TYW2 823 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 ATP6V0D2Q8N8Y2 350 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 ZNF512Q96ME7 567 aaPredicted RBP12.15□□□□□ -0.46
TRA2B-214ENST00000487615 B3GNT5Q9BYG0 378 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 EML4Q9HC35 981 aaKnown RBP12.15□□□□□ -0.46
TRA2B-214ENST00000487615 KIAA1551Q9HCM1 1747 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 BNIP3LO60238 219 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 USP17L7P0C7H9 530 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 MATKP42679 507 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 GHRHRQ02643 423 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 FSTL1Q12841 308 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 SNX17Q15036 470 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 CELF6Q96J87 481 aaKnown RBP12.15□□□□□ -0.46
TRA2B-214ENST00000487615 LBHD1Q9BQE6 289 aaPredicted RBP12.15□□□□□ -0.46
TRA2B-214ENST00000487615 FAM167BQ9BTA0 163 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 UBP1Q9NZI7 540 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 TRHDEQ9UKU6 1024 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 DDX60LQ5H9U9 1706 aaKnown RBP12.15□□□□□ -0.46
TRA2B-214ENST00000487615 SNX2O60749 519 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 PDHA1P08559 390 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 HSPA8P11142 646 aaKnown RBP12.15□□□□□ -0.46
TRA2B-214ENST00000487615 CALB2P22676 271 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 CCR1P32246 355 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 PEX19P40855 299 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 ZNF135P52742 658 aaPredicted RBP12.15□□□□□ -0.46
TRA2B-214ENST00000487615 RPL10AP62906 217 aaKnown RBP12.15□□□□□ -0.46
TRA2B-214ENST00000487615 YWHAHQ04917 246 aaPredicted RBP12.15□□□□□ -0.46
TRA2B-214ENST00000487615 ANKRD20A4Q4UJ75 823 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 CXCL17Q6UXB2 119 aa12.15□□□□□ -0.46
TRA2B-214ENST00000487615 CRELD2Q6UXH1 353 aaPredicted RBP12.15□□□□□ -0.46
TRA2B-214ENST00000487615 TRPA1O75762 1119 aa12.15□□□□□ -0.47
TRA2B-214ENST00000487615 ATP4AP20648 1035 aa12.15□□□□□ -0.47
TRA2B-214ENST00000487615 KCNA3P22001 575 aa12.15□□□□□ -0.47
TRA2B-214ENST00000487615 XPAP23025 273 aaPredicted RBP12.15□□□□□ -0.47
TRA2B-214ENST00000487615 CASP2P42575 452 aa12.15□□□□□ -0.47
TRA2B-214ENST00000487615 POU5F1Q01860 360 aaKnown RBP12.15□□□□□ -0.47
TRA2B-214ENST00000487615 PARP6Q2NL67 630 aa12.15□□□□□ -0.47
TRA2B-214ENST00000487615 CDCA2Q69YH5 1023 aaPredicted RBP12.15□□□□□ -0.47
TRA2B-214ENST00000487615 ANKRD23Q86SG2 305 aa12.15□□□□□ -0.47
TRA2B-214ENST00000487615 MIB1Q86YT6 1006 aa12.15□□□□□ -0.47
TRA2B-214ENST00000487615 CPT1BQ92523 772 aa12.15□□□□□ -0.47
TRA2B-214ENST00000487615 GCNAQ96QF7 691 aa12.15□□□□□ -0.47
TRA2B-214ENST00000487615 RRAGCQ9HB90 399 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms